Podarcis muralis (common wall lizard): 114595513
Help
Entry
114595513 CDS
T06059
Symbol
ATG16L2
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 16-2
KO
K20868
autophagy-related protein 16-2
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114595513 (ATG16L2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114595513 (ATG16L2)
03029 Mitochondrial biogenesis [BR:
pmua03029
]
114595513 (ATG16L2)
Membrane trafficking [BR:
pmua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114595513 (ATG16L2)
Others
Specific organelles associated proteins
Auto phagosome
114595513 (ATG16L2)
Mitochondrial biogenesis [BR:
pmua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114595513 (ATG16L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ATG16
Beta-prop_WDR3_2nd
WDR55
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_SPT8
eIF2A
Beta-prop_WDR41
TAF1C_beta-prop
CALCOCO1
Cytochrom_D1
DUF4461
Motif
Other DBs
NCBI-GeneID:
114595513
NCBI-ProteinID:
XP_028581638
LinkDB
All DBs
Position
4:complement(6087366..6129527)
Genome browser
AA seq
615 aa
AA seq
DB search
MAESGGGGGRLCRRCWKRHIVRQLQQRDRAQKARFLDLVEAYNKLLEKTNLENLTAKLQA
KSLDNLRGFPPRSIQETTDCFLGAVLGSAETTESLKGIHERHLAELESINGELAYSIYEW
NLQLQAKDAELEEQRGRLAGLSGHVSELEAEHRLLREQVEELSRRTAAMKDDYVSLHQRY
LQQDGEFRRAAERGLELLRCFMQRKAEAAEHRNKALERAKQDRLAKELKKAARTPVGIKV
EAEEGKADEQKMLPRDAQEEPGEKVWKRPFRSASATSMTLTRYVGVFKGLFDFRMKRGSS
FSNPSEERYYYIPSCAAACLPSRVSDEQEGHASEINAARFSPNSSVLATGGADKLIRLWN
VTGGRMEKMKTLEGANGGITSVEFDPSGFHVLAATYNNAAQLWKVDDGRFKEVLTGHTDK
VTAARFRATRHQAVTGSRDRTVKEWDLTKGACYRTIDVFSYCNDLVCCDTFIISGHHDKT
IRFWDSRDPRCTQVIPVEGKVTSLSISPDQMHLLSCSRDNALKVIDLRMHNIRQVFRAEG
FKCGSDGTKAVFSPDKSYALVGSADGALYLWNMETGKLETSLPGVHSSPVNAVAWSPSGA
YIGSVDRSRKVVLWS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagtggaggcggcggcggccggctgtgtcgccgctgctggaagcgccacatc
gtccggcagctgcagcagcgggatcgggcgcagaaggcgcgcttcctcgacctggtggag
gcctataacaagctcttggaaaaaaccaacctggaaaacctcactgcaaagctgcaagct
aaatctctggataacttgcgaggattccctcccagatccatccaggagaccactgactgt
ttcttgggtgcagtcttgggctctgcagaaacgacggagagcctgaaggggattcatgag
agacatttggcggagctggaaagcatcaacggggagcttgcctacagcatctatgaatgg
aacttgcagctccaagcgaaagatgccgaactggaggaacagaggggcaggctggccggt
ctgagtgggcacgtctctgagctagaggctgagcatcgcctgctgcgggagcaggtggag
gagctgagccgcaggacggcggccatgaaagacgactacgtctctctgcaccagcgctac
ctgcagcaggacggggagttccgccgggcggccgagagaggcctggagctgctcaggtgc
ttcatgcagaggaaagcggaggccgccgagcacaggaacaaggccctcgagagggcaaag
caagaccggctggccaaggagctgaagaaggcagcgaggaccccggttggcattaaggta
gaggcagaagaagggaaggctgatgagcagaagatgctccccagagacgcccaggaggag
cctggcgaaaaggtgtggaaaaggccctttcgatctgcttctgccacttccatgaccctc
accagatacgtgggtgttttcaagggtttgtttgatttcaggatgaaacgtgggagctcc
tttagcaacccctcggaggaacggtactattacattccctcctgtgcggcggcctgcctt
ccatcaagagtgagcgacgaacaggaaggccatgcctccgaaatcaacgctgccaggttc
agtcccaattcatctgtgctggccactggtggggccgacaagctgatcaggctctggaat
gtgacaggaggccgaatggagaagatgaagacactggaaggggctaatggaggcatcacc
agcgtcgagtttgacccatcgggatttcacgtcttggcagctacatacaacaatgctgct
cagctatggaaggttgacgatggccgtttcaaggaggttctgacggggcacacggacaaa
gtgacggcggccaggttcagagccactcggcaccaagctgtgacaggcagccgggacagg
acagtgaaggagtgggatttgaccaaaggggcgtgctacagaaccatcgacgtcttctcc
tattgcaacgatcttgtgtgttgcgacaccttcatcatcagtggacatcacgacaagacc
atccgtttctgggacagcagagatccccgctgcacacaggtgatccctgtggaaggcaag
gtgacctccttgagcatcagtcctgatcagatgcacctactgagctgctccagggacaac
gccctcaaagtcatcgaccttcgaatgcacaacatccggcaggtcttcagggctgaggga
ttcaagtgcggttccgatgggaccaaagctgtattcagccccgataaaagctatgccctg
gttggctccgcagacggcgctctctacctgtggaacatggagacggggaagctagagacc
agcctgcctggagtgcacagctcacctgtgaacgctgtggcctggagcccctcgggagcc
tacattgggagtgtggaccgaagcaggaaggtggtcctctggagctga
DBGET
integrated database retrieval system
