KEGG   Podarcis muralis (common wall lizard): 114595769
Entry
114595769         CDS       T06059                                 
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
  KO
K10802  high mobility group protein B1
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03410  Base excision repair
pmua04140  Autophagy - animal
pmua04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114595769 (HMGB1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    114595769 (HMGB1)
  09143 Cell growth and death
   04217 Necroptosis
    114595769 (HMGB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmua03036]
    114595769 (HMGB1)
   03400 DNA repair and recombination proteins [BR:pmua03400]
    114595769 (HMGB1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmua04147]
    114595769 (HMGB1)
Chromosome and associated proteins [BR:pmua03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    114595769 (HMGB1)
DNA repair and recombination proteins [BR:pmua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     114595769 (HMGB1)
   MMR (mismatch excision repair)
    Other MMR factors
     114595769 (HMGB1)
Exosome [BR:pmua04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   114595769 (HMGB1)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 NOA36 DUF4667
Other DBs
NCBI-GeneID: 114595769
NCBI-ProteinID: XP_028582255
LinkDB
Position
4:complement(28063220..28072955)
AA seq 217 aa
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMESYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSANDKQPFEKKASKLKEKYEKDVAAYRAKGKPEVAKKLAPPKPE
KSKKKKEEEDDDDDEDDDEEDEDEDEEEDEEEEDDDE
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggcaaaggtgatcctaaaaagccaagaggcaaaatgtcctcatatgcctactttgtg
caaacttgccgagaagagcacaagaagaaacacccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgttcagaacggtggaagactatgtctgctaaagagaaaggaaagttt
gaagatatggcacgagctgacaaagttcgttatgaaagagaaatggaaagttacatacca
cctaaaggagagacgaaaaagaaattcaaggacccaaatgcaccaaagaggcctccctca
gcatttttcttgttctgctctgagtatcgtccaaaaatcaaaggagaacaccctggcctc
tctattggggatgttgcaaagaaactcggagagatgtggaataatacttccgcaaatgat
aagcaaccgtttgaaaagaaggcatccaaactgaaggagaagtatgaaaaggatgttgct
gcatacagagctaaggggaagcctgaggtagccaaaaagctagctccacctaagcctgag
aaaagcaagaaaaagaaggaagaggaagacgacgacgacgacgaggatgatgatgaagag
gatgaagatgaggacgaggaagaggatgaggaagaagaggatgatgatgaataa

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