Podarcis muralis (common wall lizard): 114595769
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Entry
114595769 CDS
T06059
Symbol
HMGB1
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03410
Base excision repair
pmua04140
Autophagy - animal
pmua04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114595769 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114595769 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
114595769 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmua03036
]
114595769 (HMGB1)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114595769 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114595769 (HMGB1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
114595769 (HMGB1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
114595769 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
114595769 (HMGB1)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
114595769 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
NOA36
DUF4667
Motif
Other DBs
NCBI-GeneID:
114595769
NCBI-ProteinID:
XP_028582255
LinkDB
All DBs
Position
4:complement(28063220..28072955)
Genome browser
AA seq
217 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMARADKVRYEREMESYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTSANDKQPFEKKASKLKEKYEKDVAAYRAKGKPEVAKKLAPPKPE
KSKKKKEEEDDDDDEDDDEEDEDEDEEEDEEEEDDDE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggtgatcctaaaaagccaagaggcaaaatgtcctcatatgcctactttgtg
caaacttgccgagaagagcacaagaagaaacacccagatgcttcagtgaacttttcagag
ttctcaaaaaaatgttcagaacggtggaagactatgtctgctaaagagaaaggaaagttt
gaagatatggcacgagctgacaaagttcgttatgaaagagaaatggaaagttacatacca
cctaaaggagagacgaaaaagaaattcaaggacccaaatgcaccaaagaggcctccctca
gcatttttcttgttctgctctgagtatcgtccaaaaatcaaaggagaacaccctggcctc
tctattggggatgttgcaaagaaactcggagagatgtggaataatacttccgcaaatgat
aagcaaccgtttgaaaagaaggcatccaaactgaaggagaagtatgaaaaggatgttgct
gcatacagagctaaggggaagcctgaggtagccaaaaagctagctccacctaagcctgag
aaaagcaagaaaaagaaggaagaggaagacgacgacgacgacgaggatgatgatgaagag
gatgaagatgaggacgaggaagaggatgaggaagaagaggatgatgatgaataa
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