Podarcis muralis (common wall lizard): 114596158
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Entry
114596158 CDS
T06059
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114596158 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114596158 (DDX3X)
03041 Spliceosome [BR:
pmua03041
]
114596158 (DDX3X)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114596158 (DDX3X)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114596158 (DDX3X)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114596158 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
114596158 (DDX3X)
Spliceosome [BR:
pmua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114596158 (DDX3X)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114596158 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114596158
NCBI-ProteinID:
XP_028583188
UniProt:
A0A670I1L2
LinkDB
All DBs
Position
4:complement(59929867..59949415)
Genome browser
AA seq
736 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDDQSGGGTASKGRYIPPHLRNREASKQAGNAYNYAA
NYYSNSMPPRSYSPSWDSRGGNGYMNGYDRDSRMNGYDRDRGVFGSRGGSGRDDRGFDGG
WNAGRDRDAAYSSFGARSDRGSGKSSFFAERGNGSRGRFDDRGGRGGEFDGISSRGGDRS
AFGGRFDRGGNSRWSDKSDEDDWSKPLAPSERVEQELFAGGNTGINFEKYDDIPVEATGN
NCPPHIESFSDVDMGEIIMGNIELTRYTRPTPVQKYAIPIIKDKRDLMACAQTGSGKTAA
FLLPILSQIYTDGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRS
KVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRML
DMGFEPQIRRIVEQDTMPPKGVRQTMMFSATFPKEIQMLARDFLEEYIFLAVGRVGSTSE
NITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHG
DRSQRDREEALHQFRSGRSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTG
RVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEQIHKGGSSRGRSKGRF
SGGFGARDYRTSSSTSSSSSFGSSRTSSGRSGGSGGGGGHGGSRGFGGGGGGYGGFYNSD
GYGGNYNSQGVDWWGN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcagtggaaaatgccctcggtctagatcagcagtttgctggtctagac
ttgaattcctcagacgatcagagtggaggaggtacagcaagcaaaggccggtacattcct
cctcacttacggaatagagaagcttcaaagcaggcaggtaatgcctataactatgcggca
aactactattccaattcgatgccaccaagaagctattcccccagctgggactctcgtgga
ggtaatggctatatgaatggatatgatcgtgacagccggatgaatggctacgatcgtgat
cgtggtgtgtttggatccagaggaggatctggacgtgatgacagaggatttgatggtggg
tggaatgctggcagagacagggatgctgcatacagtagctttggtgcaaggagtgaccgt
ggatcaggaaaatcaagcttttttgctgagcgtggtaatggttcaagaggaaggtttgat
gaccgtggtggaagaggcggtgaatttgatggcattagcagtcgtggtggtgatagaagt
gcctttggcggcagatttgatcgtggtggaaacagtcgttggtctgataaaagtgatgaa
gatgactggtccaaaccacttgccccaagtgaacgtgtggagcaggagctgtttgctggt
gggaatactggcattaattttgagaagtatgatgacattccggttgaagcaacaggcaac
aactgtcctccacacattgagagcttcagcgatgttgacatgggagaaatcattatgggg
aacattgaactcacccgctacactcggcctactccagtgcagaaatatgctatccctatc
atcaaagacaagagagacttgatggcttgtgcccagacagggtctggaaaaactgctgca
tttcttctgcccatattgagtcagatatatacagatggcccgggtgatgccctcagagca
atgaaggaaaacggaaggtatggacgccgtaagcaatatcccatctcactcgttttggct
cccacaagagagctggcagtgcagatatatgaagaagccagaaaatttgcatatcgctcc
aaagtccgcccctgcgtcgtgtatggtggggccgacattggtcaacagatacgtgacttg
gaacgtggttgccatttgcttgtagcaactccaggtcgtcttgtagatatgatggagaga
ggaaagattggactggacttttgcaaatacttggtactggatgaagctgatcgtatgctt
gacatggggtttgaacctcaaatccgtcgtattgttgagcaagacactatgccacccaaa
ggtgtccgtcagactatgatgttcagtgctacttttccaaaggaaattcagatgcttgct
cgtgacttcttggaggaatatatctttctggctgttggcagagttggctctacatctgag
aacatcacacagaaagtagtgtgggtggaagagtcagacaaacggtcatttctgcttgac
ctcctaaatgccacaggaaaagattccttgactctggtgtttgtggagactaaaaagggg
gctgattctctggaggatttcctctaccacgaaggctatgcttgcacaagcatccatggt
gatcgctctcagcgagacagggaagaggcattgcaccagttccgttcaggcagaagtccc
atcttggttgccactgcagtagcagcaagaggattggatatctcaaatgtaaaacacgtc
ataaactttgatttgccaagtgacatagaagaatacgtgcatcgcattggccgtacaggc
cgtgtcgggaatcttggtcttgccacatcattcttcaatgagaggaacataaatatcaca
aaagatttgctagatctacttgttgaagctaaacaggaagtaccatcttggctagaaaat
atggcatatgagcagattcacaagggtggaagcagtcgtgggcgatcaaaaggccgtttc
agtggaggatttggtgcccgagattatcgaacaagtagcagtaccagcagcagcagtagc
tttggcagcagccgcacaagtagtgggcgcagcggtggcagtggtggtggcggtggccat
ggaggcagcagaggatttggaggtggaggtggtggctatggcggcttctataacagtgat
ggatatggaggaaactataactctcagggggtagattggtggggcaactga
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