Podarcis muralis (common wall lizard): 114597032
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Entry
114597032 CDS
T06059
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmua04121
]
114597032 (ZSWIM8)
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
114597032 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
114597032
NCBI-ProteinID:
XP_028584872
LinkDB
All DBs
Position
5:13549589..13608558
Genome browser
AA seq
1865 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDTNAAPLLE
ILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPHRRRDLCTQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEEAY
PIPGITYSNADKKNSFCWVKAIQQRNCRPQCGETICEAGRAHGLDVSGTCLQLGDRSRPA
SQEPAVRPKELIGKRKVVSEGPQRVLRRLSAEGDKAAYKTAVNKGGKLPVGKTLASKHSG
KRRMSSEDSSLEPDLAELALDDSSLALGAEASNTFSFTDSPLSRSYRDTFEDDGGVYFSE
ATEPTLRSSPSSKKNPKNPVGEVGSGDDDIPCPDESTGGVSLKPKEVGENGAAGGGGEEE
EDDYQVYYLNPQEVAKEEDDKAEGGVEEEQDIFAGIKPLEQENRMEILFACAEALYAHGY
SNEACRLTVELAKDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLTVLS
ERQEYHNLAFQIGMFALELQRPPASTKALEVKLAYQESEIVALLKKIPLGSNEMNTIRGR
AEELREGTLCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNWNNEMPGDEELGFEAA
VAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHK
PQTLSSFYSSSKPTVANQKSPSKHATQSAAPIQHLPGTPVTQQAGVTTAVQSNTSEPFLE
KSSQDNPQRSPCDPPMEPSVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTAKDSK
HNASINMWHGYIQNTVYSSGHPIKTKIGMASIDSSAPETTSDSSPTLSRRPLRGGWAATS
WGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAKTVEVGRYKGRRPESHAPHVPNQPS
EAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNF
VSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDSNM
VRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNLMLEKACLAVEEAAKGGGVYPEVLF
EVAHQWYWLYEQTVGGTLAQREGATGCSASGARASCEAVRGLADTRVTSEPTTVTVAAAV
TAAATVVPVISVGSTIYQQHTMAGPAMAHAHTQGLHPYTTLQTHIPCNPQYIGHPIQHMP
RPAVFPVPGSAYPQAGLPCPLPLQGVHPAFIGAQYPYSVTTPSLAATAVSFPGVPVPSMT
QIAVHPYHAETGLSLSSNVAIGSVHAGSTFPAIQGTSLTSLSSQPSSLVTGGFPSEDEQH
SQPAGNQGVHHLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLGLAAKLGV
NYVHQFCLGAAKGVLSPFVLQEIIMESLQRLNPAHVHNHLRTPAFHQLVQRCQQAYIQYI
HHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRSKQTKDLWQRVSLEM
TTFSP
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgtttgcagagtgggaggacggggaaaggttttcattcgaagattctgac
cgctttgaagaagactccctttgttccttcatctctgaggcggagagcttatgccagaat
tggagaggatggcggaagcaatctgccggacccaattcccccactgtcaaaatgaaagat
gggctggtgatcccgctggtggagttgtcagcaaaacaggtggcatttcacattccattt
gaagtggttgagaaagtctacccacctgtgcccgaacaactgcagcttcgtattgccttt
tggagcttcccagaaaatgaagaggacatcaggctgtactcctgcttggcaaatggcagt
gcagatgagttccagagaggcgagcaactcttccgaatgagggctgttaaagatccactg
cagataggtttccatctgagtgccacagtggtacctccccagatggtaccaccaaaagga
gcatacaatgtggcagtgatgtttgacagatgcaggatcacctcatgcagctgcacttgt
ggagctggggccaaatggtgtgcccatgttgtagccctctgccttttccggatacacaat
gcatctgcagtgtgcttgcgagcacctgtctcagaatccctgtctcgactgcagagagat
cagctgcagaaatttgcacagtacctcatcagtgaacttccccagcagatccttcctact
gctcagcgcttgctggatgagttgctctcttctcagtccactgctatcaatactgtatgt
ggagccccagatcccactgccggtccctctgcctcagatcaaagcacctggtacttggat
gaatctacattaagcgacaacataaagaaaacccttcacaaattttgtggtccatctcct
gttgtcttcagtgatgtgaactctatgtacctttcgtccacggagcccccagctgccgcc
gaatgggcctgtctcttgcgtcctctgagggggagggagccggagggcatctggaactta
ctttctattgttcgggagatgttcaagagacgggacaccaatgcagcccctctgctagaa
attctaacagaccagtgcctgacctacgagcagataactggctggtggtacagtgtaagg
acatctgcatcccatagcagtgcaagtgggcacactggccgtagcaacggccagtcagaa
gtggctgctcatgcttgtgcaagcatgtgcgatgagatggtggttctctggaggcttgct
gtcttggatccgaccatcagccctcatcggcggagagatttgtgcacacagctgaggcag
tggcaattgaaggtaatagacaacgtcaaaaggggacagcacaaaaaatcccttgagaaa
ctgttccaggggttcaagccagctgtggaagcttgctacttcaactgggaggaggcctat
ccaattccaggcatcacatacagcaatgctgacaagaagaactccttttgttgggtaaag
gccatccagcagcgaaactgccgaccgcagtgtggagaaaccatctgtgaggcggggaga
gctcatggtctggatgtttcggggacgtgcttgcaactaggggatcggtcacgccctgcc
tctcaggagcccgctgtgcgccccaaagaactcattgggaagcggaaagttgtgtctgaa
ggtccccagcgggttcttagaagactttcagccgaaggcgataaagctgcatacaagacg
gctgtgaacaagggcggcaagcttccagtgggaaagaccttggccagcaaacatagcggg
aagcgccgcatgagtagcgaggacagctctctggaaccggacttggccgagttggcttta
gatgacagcagtttggcccttggcgccgaggctagcaacacgttcagcttcacagacagc
ccgttgagcagaagttacagggatacctttgaggatgatggtggggtgtatttctcagag
gcaactgagcccaccctcaggagtagtccatccagcaagaagaacccaaagaacccagtg
ggggaagtgggtagtggagacgatgacattccttgccccgatgaaagtactggtggggtg
agtttgaagcccaaggaagtgggggagaatggtgctgctggaggaggaggagaagaggag
gaagacgactaccaggtgtactatctgaatccccaggaggttgctaaggaagaggatgac
aaggctgagggaggggtagaagaagaacaagacatatttgctgggataaagcccttggag
caggaaaaccgcatggagatcttgtttgcttgtgcggaggctctctatgcacatggttac
agcaatgaagcctgtcgcctcacagttgagcttgccaaggacttgttggccaaccctcct
gatctcaaagtggaacagcccccaaccaagggaaagaaaaacaaggtatccaccagcaaa
cagacatggatggcaacaaacacgttatccaaagctgctttcctgctgactgtgctgagt
gaacggcaggaataccacaatctagccttccagattggcatgtttgctctggagctgcag
aggccgccagcctctaccaaggctttggaggtaaagctggcatatcaggagtctgaaatt
gtggccttgttgaagaaaattccacttggctctaatgagatgaacactattcggggaaga
gctgaagagctgagggaaggaaccctgtgtgattaccgccctgtcttgcctcttatgctg
gccagcttcatatttgatgtcttatgcacgccagtggtttctcctacaggatccagacct
ccaagccgtaattggaataatgaaatgcctggagatgaggagctaggttttgaggcagct
gtcgctgctcttggcatgaagacgacagtgagtgaagcagagcaccctctgttgtgtgaa
ggcacccgaagggagaagggagatctcgctctagccctgatgatcacttacaaggatgac
caatctaagctaaaaaaaatcttggataagctgttggacagggagagccaaacacacaag
cctcagactctaagttcattctactcgtccagcaagcccacagtagccaatcagaaatct
ccttccaaacatgctacccaatcagctgcgcccattcagcacctcccaggaacacccgtt
acgcaacaagcaggggtaaccactgctgtccagagcaacacttcggaaccctttttggaa
aagagttcccaagataaccctcagagatctccttgtgacccaccaatggaacccagtgtc
ttaaagcaagaagggaaagttcctagccgactagcccttggaaatagaggtggctacaat
gggaggtgctggggttccccagtcagacaaaaaaagaagcacacagcgaaggacagcaag
cataatgccagtataaatatgtggcatggctacatacagaatactgtgtacagttctggt
caccccatcaaaacaaaaataggaatggccagcattgacagcagtgctccagaaaccacc
tcggacagttctccaaccctcagcaggcggcctctgcggggaggatgggcagccacttcc
tggggcagagggcaggacagcgatagcatcagtagctcttccagcgactccctgggctca
tcatcctccagtggaagcaggagagctagtggaggagcacgtgcaaagacggtggaggtc
ggcaggtataagggcaggcgtccagagagtcatgctcctcatgtcccaaatcagccctcg
gaagcagctgcacatttctattttgagctggccaagacagttctcatcaaggcgggtgga
aacagcagtacttccattttcacccacccatcctctagtggcggccaccagggtcctcat
cgcaacctccacctctgcgccttcgagattggtctctatgcactggggttgcacaacttt
gtctctcccaactggctgtctcgaacttattcctcccacgtctcttggattacagggcaa
gccatggagattggcagtgcagccttgaacatcctggtggagtgctgggatgggcacctg
acccctccggaggtagcgtccctggctgacagggcttccagagctagggattccaacatg
gtgcgagcagccgctgagctggcattgagctgcttgccgcacgcccacgccttgaaccca
aacgagatccagagagccctggtccagtgcaaggagcaggataatctaatgctggagaag
gcatgcttggcagtagaggaggcagccaaaggaggtggtgtttaccctgaagtcctgttt
gaagttgctcaccagtggtactggttgtacgaacaaactgttggcggaactcttgctcag
agagagggagccacaggctgcagtgcaagtggagcccgggcatcctgcgaagcagtgcgt
ggactggcagataccagagtgacgtcagaacccaccacagtgactgtcgcggctgcagtg
acagcagcagcaacggtggtgcccgtaatttcggtggggtcgacaatctaccagcagcac
accatggcggggccagcaatggcccatgcgcacacccagggtctgcacccttatacaaca
ctccagacccacatcccttgcaatcctcagtatatcgggcaccctatccagcacatgcca
cgtccggcggtctttcctgttcctggctcagcttatccccaagcagggttaccctgtcct
cttcctttgcagggtgtccacccagcgttcattggagcacagtacccatactcggtcact
accccgtctttggcagctacagcagtgtccttcccaggagtgcctgtcccatccatgacg
cagattgctgtgcatccataccatgctgagaccgggctgtctctgtcttccaatgtagca
ataggaagtgttcatgcagggtctacattcccagcgattcaagggacttccttgacgagt
ctatcttctcagcccagctcccttgtcacaggaggctttccttctgaggatgagcaacac
agccagcctgcaggcaatcaaggcgtgcatcacctccactctgcctaccgagttggaatg
ttagcactggagatgcttggccgcagagctcacaatgaccaccccaacaacttctcacgc
agcccaccctacacagaagatgtgaaatggctcctgggattagctgccaaattaggtgtc
aactatgtgcatcaattctgtcttggtgcagccaagggggtcctgagcccttttgtgttg
caagagatcatcatggaatccctgcagaggctcaatcctgcccatgtccacaatcacctg
cgcacaccagccttccaccagttggtacagaggtgccagcaggcatacatacagtacatc
caccaccggctgatccacctcactccggcagactacgatgactttgtgaatgccattcgc
agcgccagaagcgccttttgcctgacccctatgggcatgatgcaattcaatgacatcctt
cagaacctgaagcgcagcaagcagactaaggatttgtggcaaagggtctctttggaaatg
accaccttttcaccatga
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integrated database retrieval system
