Podarcis muralis (common wall lizard): 114597519
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Entry
114597519 CDS
T06059
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmua03009
]
114597519 (PDCD11)
Ribosome biogenesis [BR:
pmua03009
]
Eukaryotic type
90S particles
Other 90S particles
114597519 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Suf
HAT_PRP39_C
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
OB_RRP5
TPR_19
ARM_TT21
ARM_TT21_5th
HAT_Syf1_M
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
114597519
NCBI-ProteinID:
XP_028586216
LinkDB
All DBs
Position
5:complement(54808416..54838135)
Genome browser
AA seq
1843 aa
AA seq
DB search
MPFAGLRIRFRVTEQMATLTPQACQKITMSSVEENFPRGGPQRKSQEEKAARQSTVEQDN
LFKTQHEEVAKKRKKNHQDETKPKKLKIEKKAVVKIGVKHFEFLTVESLTAGVLLLGCVK
ESNQFELVISLPNGLTGFVQATRISDAYNEMLNEQVATDAHLEDLNSLSDLFTPGMLVRC
AVVGVEKTTTGRQSIQLTINPKDVNKALNAATLRPGMLLSGCISSVEDHGYLIDIGIPST
KAFLPRQKAKAYLQSANKGTELKIGQYFNCLIEEVKNGGRIIRMAINQSEVAAAIATEEQ
NWSLGNLQPGLVVKAQIQEVTPFGISLSFLSSFSGLVDYMHMSSTKTRNYSPGQTVKACI
LFNNPTSKAIRLSLRPVFLQPGTQLGKLSSDQIGRVVPDSTVETFLKKTGAIFKLDSGCL
AFAHIKHLSDTAKSFKPAAFKPGSKHKCRIIDYSPMDDVVVVSLKQHIIEAPFLRYHDIH
PGQVVEGTVLALKPFGMQVKVTEHIKGLVPRLHLADVLLKQPEKKYSVGSTVRCRVLSCN
PEARKLALTLKRTLVNSKLPALSSFEDAKPGLTTHGFVACAREFGCIVKFYNDIKGLVPK
TELGGAPSIVPQETFYAGQVVKVIVLKCEPEQERLLLSFKLTNEALAEDGGEKKTSKKRE
VTYETGRIVDVKILRKKEDGLEVTILPDNVFAYLSTNHLSDYVSNSKLWWSCLKADDILH
RVLCLHDKGGHVTLSRKPSVISAIEEERVVKSFSDIQPGLLLTGFVRNVMPYGVFVEFPY
GLTGLAPKSAMSDKFVTETKDHYVVGQTVVAKVTSIDEEKQRILLSLKVSECSSEDSVSE
SFCLLHKYFKELQEIKSIRSGRDDVDVVQKVCELKPGQKLMLTARKVNTDGSALFDSTSV
SGLTIMAIHSHLGGKSIVEGEKTRAVVLCIDSLESKVYVSLREELLSPKPKKLKQNSQHQ
AIVQHVATEHAVVSLVGNGQLVAIPVASHFNDTFRFDSEKLKVGQSVLVVLKTLQPGDCG
LLLAVQDQKKRKAVIRSRRESETLGETSAIVNHSLCLGDVVKGTVKSIKPTHVLVAINDQ
LIGSIHASQILDKVSIGTFPTSVLRVGQQLTARVIGGKDIKNHRYLPITHPHFTRTCPEL
SIRPSELSGESKTALGPEDGNPEEILKPFKPGQMVTCFVKKYAAANKWLEVEVTPNIRGR
VQQLLLSLRPTVLKHAGKHFRNGQALAATVTGSDVTETKLHLSLTGVYSLEKGTVTLGYV
SKVIPHVGLNVQLPFERKGKVSLFHLSDSYAEQPLEMFSIGKIVRCYILSSEGKKMEVSL
RQSRINPKSHCKVEDPEITSLDDLQNGQLVRGYVKSITPSGIFFGLSDSVVGQIPPQLIS
PLFISDHSLCAKYIHAGQFITAKVFSINKEKNLAELSLLPEDTGKPSIIPESLEQPVGEK
DAQPRKRKRENSESEQEVKARKKKTRCPEDDDSGVEVYYREEEEGEEKKCATKSKEKKVP
RLQVSASFTWEEGLSVLDTTMLKQREQSSDSEEEDDDVTESTTKKQTKKKKELEKQKAEK
ELSKLEAALMDPSRQPQAADDFDRLLLGNPDSSILWLQYMAFHLQATEIEKARAVAERAL
KTISFREEQEKLNVWVALLNLENMYGTEEALMKVFERAIQYNEPLKVFQQLADIYSGSEK
YTQADDLYNTMLKRFRQEKSVWVKYATFLLKRGLVEAAHKLLPRALKCLPVKEHLDLISK
LAQLEFQFGDLEYGKTVFENTLSTYPKRTDIWSVYIDMMIKHGSQKEVRDIFERVIHLSL
AAKKMKFFFKRYLEYEKKYGTAETVQAVKAAALEYVESKSSLA
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgctggccttcgaattcgtttccgggttacggagcagatggcgactctcacg
ccccaggcgtgccaaaagataaccatgtcatctgtagaagagaatttccctcgaggtggc
ccacaaaggaaaagtcaagaagaaaaagcggccagacagtcaacagtagagcaggataat
ttattcaaaacgcaacatgaagaagtggccaagaaaagaaagaaaaaccaccaagatgaa
acaaagccaaaaaaactcaagattgagaagaaagccgttgtaaaaatcggtgttaaacat
tttgaatttctaacagttgagtccctcactgcaggggtactgctcttaggatgcgtgaaa
gagtctaatcagtttgagctggtgatcagcttgcccaatgggctcactggatttgtgcaa
gcgacacgtataagtgatgcctacaatgagatgctgaatgaacaggtggctacagatgcg
cacttagaggatctgaattctctctcagatctctttaccccaggaatgctggtcagatgt
gctgtggttggtgtggagaagactactacaggtcgtcagagtatacagctaacaatcaac
cccaaagatgtcaacaaggctttgaatgctgccactctgagacctggcatgctgctctct
ggctgcatctctagtgtggaagatcacggctaccttattgacataggcatcccatcaaca
aaagcatttctgcctcgtcagaaagccaaggcctacctccagtcagccaataaagggact
gagctgaagataggccaatacttcaactgccttattgaagaagtaaagaatggtggaagg
ataatccgcatggccattaatcagtcggaggttgctgcagctattgccacagaagaacaa
aactggtcccttggcaatttgcaacctgggctggtggtgaaagcccagattcaggaggtg
actccttttggaatttctctaagttttctgtcttccttctctggacttgtggactacatg
cacatgagttctacaaaaacaagaaactactcaccaggtcagacggtgaaagcatgcatt
ctcttcaacaatcctacctccaaggcaatacgcctatctctgcgcccagtattcctccag
cctggcactcaacttggcaagctgtctagtgatcagattggcagggtagttccagactcc
acagttgagacctttctcaaaaagactggtgccatcttcaagctggatagtggctgccta
gcttttgcacatataaaacatctttcagatactgccaaatctttcaaacctgcagcattc
aagcctggaagcaagcataaatgccgaattattgactacagcccaatggatgatgtggtg
gtggtgtctctcaaacaacacattattgaggctccattcctgagataccatgatattcat
cctggacaggtggtggaaggcacagtgttggctctgaagccctttggcatgcaagtaaag
gtgactgagcacatcaagggcctggttccccgactgcatctggcagatgtgcttctgaaa
cagccagagaagaaatacagtgtggggagcactgtccggtgtcgggtgctttcctgcaat
cctgaagcaaggaaactcgctctgacgcttaagagaacacttgtcaattccaaactccct
gccctttccagtttcgaagatgcaaagccaggcttgaccacccatggttttgttgcctgt
gctagggagtttggctgcattgtgaaattctacaacgacataaagggccttgtccccaaa
actgagcttggtggggcaccttcaattgttcctcaggaaacattttatgcaggccaggtg
gtcaaagtgattgtcttaaaatgtgagccggagcaggagagactgctgctgtcattcaag
ctgacaaatgaagcactagctgaggatggtggagaaaaaaagacttcaaagaagcgagaa
gtaacatatgaaaccggacggattgttgatgtaaaaattctgaggaaaaaagaagatggc
cttgaagttacaatcttgccggacaatgttttcgcctacctttctacaaatcatctctct
gactatgtgtccaatagcaagttgtggtggtcctgtcttaaagcagatgatattctccat
agagtgttatgcctccatgacaagggaggtcatgttaccctgagcagaaagccatcggtg
atttcagcaattgaggaggaacgggtggtgaagagcttttcagacatccagcctggattg
ctgctgactggctttgtgagaaacgtcatgccttatggtgtgtttgtggagtttccatat
ggtctgacagggctggcacccaagtcggcaatgagtgacaagtttgtgacagagaccaaa
gaccattatgtggtaggtcagactgtagttgccaaagtgaccagcattgacgaggagaag
caacgcatcctgctgtccctgaaggtgtctgagtgctcctccgaggattctgtttctgag
agtttttgtttgctgcacaaatacttcaaggagctgcaggagatcaagagtatcaggagt
ggaagagatgatgtcgatgtggttcaaaaagtctgtgaattaaaacctgggcagaagctg
atgctgacggctcgcaaagtcaacactgatggttcagcactatttgatagcacctctgtt
tctggcttaactataatggctattcatagtcaccttggaggcaaaagcattgtcgagggt
gaaaaaacaagagctgtggttctctgcattgattccctagaatcaaaggtctatgtgtca
cttagagaggagttgctgtcccccaaacctaagaagttaaaacagaactctcagcaccaa
gccatcgtgcagcatgtggctacagagcatgcagttgtttcattggtaggaaatggtcag
ctggttgccatacctgtagcttcccacttcaatgacactttccgctttgattctgaaaaa
ctgaaagtgggacagtcggtcctagtggttctgaaaactctccagccaggtgactgtggg
ctcttacttgctgttcaagatcagaagaagagaaaggctgtaatcaggtcacggcgtgaa
tctgaaacacttggagaaacctcggccattgtgaatcactcactgtgcttgggagatgtg
gtcaaaggaactgtcaagtcaatcaagcctactcatgtcctagtggcaattaatgatcag
ctgatcggctccattcatgcatcccagatcctggataaagtttccattggcacctttcca
acatcagtgctaagagttgggcagcagttgactgctcgggtgattgggggcaaagacatt
aaaaatcacaggtatttgcccatcacccatccccattttacccgtacctgcccagagctc
agcatccgaccaagtgagctgtctggagaaagcaaaactgccctgggtccagaagatggc
aatccggaagaaatactgaaaccctttaagcctgggcagatggtgacatgctttgttaag
aagtacgctgctgcaaataaatggctggaggtggaggtcacccctaacattagagggaga
gttcaacagctgctactttcccttcgacccacggtcttaaaacacgcagggaaacacttc
agaaatggacaagctttggctgcgacggtgaccggctctgatgtcactgaaactaagctc
catctgtcacttacaggagtttactctctggagaaaggaaccgtcacgctaggctatgtg
agcaaggtgattccgcatgttggcctgaatgttcagcttccctttgaaaggaaggggaaa
gtcagccttttccacctgagtgattcatatgctgagcagccactagaaatgttcagcatt
gggaaaattgtcaggtgctatatcctttccagtgaaggtaaaaaaatggaagtgtccctt
cgacaatccaggataaatcccaagagccattgtaaagtggaagaccctgaaatcacatcc
ctcgatgatcttcagaatggtcagcttgtcagaggctatgtcaaatccatcactccatcg
ggcatcttctttgggttgtctgactcggttgtgggtcaaatcccaccacaacttatctct
cctctcttcatctcggatcattcattatgtgcaaaatacatacatgccggccagtttatt
actgccaaggttttcagtataaataaagaaaagaaccttgcagagctctctctccttcct
gaagacactgggaagccaagcattatcccagagtccctggaacagccagttggtgaaaag
gacgcgcagccgagaaagcgaaaaagggaaaactctgaaagtgagcaggaggttaaagca
cgaaagaagaaaactcgttgccctgaagatgatgatagtggtgttgaggtttactatcgg
gaagaagaggagggagaagagaagaagtgtgcaacaaaatctaaggaaaagaaagttcca
aggctgcaggtttcagccagcttcacatgggaggaaggcttaagtgtgctggatacgacc
atgttgaaacagagggagcaaagctctgacagtgaagaagaagacgacgatgttacagag
tccacgaccaagaagcagacaaagaagaaaaaagagcttgagaagcagaaggcagagaag
gaactctccaaacttgaagctgccctgatggatcccagccggcaacctcaggcagccgac
gactttgaccgattgctccttggcaacccagacagctccatcctctggttgcagtacatg
gcttttcacctccaggctacggagatagagaaagcaagagctgtggcagaaagggcactc
aaaaccatctcctttagagaggagcaagagaagctgaatgtgtgggttgcgctgctgaac
ctggagaacatgtatggcaccgaggaagcgctaatgaaagtcttcgaaagagccatccag
tacaatgagcctctgaaggtcttccagcagctggcagacatctacagtggctctgagaaa
tatacgcaagctgatgacttgtacaacacaatgctgaagcgctttcgtcaagaaaagtct
gtgtgggtgaagtatgccacttttctcctgaaaagaggcttagtagaggcagctcataag
ctcctcccacgtgcactgaagtgcctgccagtcaaagaacatctggatctgatatcaaag
ctggcacagctggagttccagtttggtgatctggagtatggcaagaccgtttttgagaat
accctgagcacctacccgaagcgtacagacatctggtcagtgtacatagacatgatgatc
aaacatggcagccaaaaggaagtacgggatatttttgaacgtgtaatacacctaagccta
gcagcgaagaagatgaagtttttctttaagcgctatctggaatacgagaagaagtatggc
acagcagaaacagtccaggctgtgaaggcagcagcactggaatatgtggaatccaagagc
agtcttgcttga
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integrated database retrieval system
