Podarcis muralis (common wall lizard): 114597520
Help
Entry
114597520 CDS
T06059
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114597520 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114597520 (TAF5)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114597520 (TAF5)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
114597520 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
114597520 (TAF5)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
114597520 (TAF5)
STAGA complex
114597520 (TAF5)
TFTC complex
114597520 (TAF5)
SAGA complex
114597520 (TAF5)
SLIK complex
114597520 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
CDK5RAP3
Cytochrom_D1
RAB3GAP2_N
eIF2A
Motif
Other DBs
NCBI-GeneID:
114597520
NCBI-ProteinID:
XP_028586219
UniProt:
A0A670I196
LinkDB
All DBs
Position
5:complement(54843260..54856200)
Genome browser
AA seq
804 aa
AA seq
DB search
MAALPEEPAEAVTVKPDPDAGAPPAPPPPPPALPQSPAAAAGATAVAGVAAAPSAPSVAA
PLAEGGEPLAAGADAKPPVAPSPAPPASQLPTDRQTLLAVLQFLRRSNLRESEEILRREA
RLLADEVAADPGSSAPGVQASHGGEGQEPGGGAPGSGDVLLSSVTFGQSGATISPGAAAA
PPAVALGPPGKVGVFVEDQPDVSAVLSAYNQQGDPALYEEYYSGLKHFIECALDCHRAEL
SQLFYPLFVHMYLELVYNGHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMRGNET
MLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMV
GSLAGEAKREANKAKVFFGLLKEPEIELPLDDEDEEGENEEGKPKKKKPKKDSMGSKSKK
QDPNAPPQTRIPLPELKDSDKLDKIMNMKEATKRVRLGPDCLPSICFYTFLNAYQGLTAV
DITDDSSMIVGGFADSTVRVWSVTPKKLRSVKSAADLSLIDKESDDVLERIMDERTASEL
KILYGHSGPVYGTSFSPDRNYLLSSSEDGTIRLWSLLTFSCLVGYKGHNYPIWDTQFSPY
GYYFISGGHDRVARLWATDHYQPLRIFAGHLADVTSTRFHPNSNYVATGSADRTVRLWDV
LNGNCVRIFTGHKGPVHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTIYT
LRFSRDGEILASGSMDNTVKLWDAVKAFEDLETDDFTTATGHINLPESSQDLLLGTYMSK
STPVTHLHFTRRNLLLAAGAYGPQ
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggcggctctgccggaggagccggccgaagcagtcacagtgaagccggaccccgacgcg
ggagcaccgccggcgccaccccctcctcctcccgctctccctcagtcgccggcagcagca
gcgggagcgacggcggtagcgggagtcgctgccgctccctctgccccctcggtcgccgct
cctctagcggaagggggcgagccgttggcggcaggagccgacgcgaagccgccggtggcg
cccagccctgcgccgcccgcttcgcagctgcccaccgaccggcagacgctgctggctgtg
ctgcagttcctgaggcgcagcaacctccgcgagtccgaggagatcctccgcagggaggcc
cggctgctcgccgacgaggtcgcggcggatcccggctcctcggcgcccggagtccaggcg
tcccatggcggggaagggcaggagcccggcggcggcgcccccggctctggggatgtgctg
ctcagctcggtcacctttggccagagcggggccaccatctctccgggcgctgccgcggcg
cctcccgcagtggccttggggccacctgggaaagttggagtctttgtggaagatcagcca
gatgtaagtgcagtactgtctgcttacaatcagcaaggagacccagcactttatgaagag
tactacagtggactgaaacacttcattgaatgtgctctggactgtcatcgggctgagtta
tcacagcttttttatcctctctttgtacatatgtacttggagctagtctacaatgggcat
gaaaatgaagcaaagtccttctttgaaaagtttcatggggatcaggagtgttattatcaa
gatgacttgcgtgtactatcaagtttaaccaaaaaagagcacatgagagggaatgagaca
atgctcgattttcgaacgagcaagtttgtgctgcgaatttcccgtgattcttatcagcta
ttgaagagacaccttcaggaaaaacagaacaatcagatctggaatattgttcaggaacat
ctttacattgatatctttgatggaatgcctcgtagtaaacaacagattgatgctatggtg
ggaagtttggcaggagaggcaaaacgggaggctaataaagcaaaggtcttttttggctta
ctaaaagaaccagaaattgagttgcctttggatgatgaagatgaagagggggaaaatgag
gagggcaagccaaagaagaagaagccaaaaaaagacagcatgggatcaaaaagtaaaaag
caagatccaaatgctcctccacagactagaatcccacttcctgagctaaaggattcggat
aagttggacaaaataatgaatatgaaagaagccactaaacgtgtacgtcttggtccagac
tgcctgccttccatttgtttctacacattccttaatgcataccagggccttacagcagtg
gacattacagatgactctagcatgatcgttggaggctttgctgactccactgtcagagtg
tggtctgtgactcccaaaaagctacgcagtgtgaaatcagcagcagatctcagtctcata
gataaagaatcagatgatgttttagaaaggatcatggatgagagaacagcaagtgagttg
aagattttatatggtcacagtggacctgtctatggtaccagcttcagtcctgataggaac
tacttgctatcatcttcagaggatggcactatcagactgtggagccttttaaccttttct
tgtctagtcggatacaaaggacacaactatcctatatgggatacacagttctctccctat
ggatattactttatatctggaggtcatgacagagtggctcgcttatgggctacggatcac
taccagcctttgcggatctttgctggccatcttgctgatgtcacatcgacgcgttttcac
ccaaactccaactacgttgctacaggctcagcagataggactgtgcggctgtgggatgtc
ctgaatgggaattgtgtcagaattttcacaggacataagggaccagttcattcattggca
ttttctcctaatggaagattcttggcaactggggcaacagatggaagagtgcttttgtgg
gatattgggcatggtttgatggttggagaattaaaaggacacacagacacaatctacaca
ctgagattcagtagagatggagagatcttagcatcaggttcaatggataacacggtaaag
ctgtgggatgctgtgaaagcctttgaggacttagaaacagatgattttaccacagccact
ggacatataaacctgcctgaaagctctcaagacttgctgttgggtacatacatgtccaaa
tcgacccctgtcacacatcttcattttacccgcagaaatttgcttcttgctgctggggca
tacggtcctcagtga
DBGET
integrated database retrieval system
