Podarcis muralis (common wall lizard): 114597585
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Entry
114597585 CDS
T06059
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114597585 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114597585 (EXOSC1)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114597585 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
114597585 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
114597585
NCBI-ProteinID:
XP_028586388
UniProt:
A0A670HWR5
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All DBs
Position
5:complement(57426040..57433242)
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AA seq
194 aa
AA seq
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MAPARYCVPGERLCSLEEGTPGSGTYTRHGSIYASLAGCLMKKSENGMLPVVSVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDVRATEKDKVEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHSKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgcgcggtactgcgtccctggagagagactctgcagcttagaggaaggaacc
cctggaagcggcacctacacccgtcatggttcgatctatgcctccctggctggttgtctc
atgaagaaaagtgagaatggcatgctcccggtggtttctgtgatgagggacgtggaatct
cagctgcttcctgatgtgggagctacagtgacgtgcaaggtttgcagcattaactctcgt
tttgccaaggtgcacatcttgtatgtcggctctacaccattaaaatccccattccgtgga
actatccggagagaagatgtcagagctacagagaaagacaaggttgaggtttacaagagt
ttccgcccaggagatattgttttggccaaagttatctctctgggtgatgcacagtccaac
tatttgctgacaacagcggaaaatgagctgggggtagtggtggctcatagtgaagcagga
gtacagatggtgccaatcagctggtgtgaaatgcagtgccccagtacacatagcaaggaa
ctgcgcaaggtagccagagtacagccccagtttctgcagacgtag
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