Podarcis muralis (common wall lizard): 114597653
Help
Entry
114597653 CDS
T06059
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04136
Autophagy - other
pmua04140
Autophagy - animal
pmua04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114597653 (ATG16L1)
04136 Autophagy - other
114597653 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
114597653 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114597653 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
pmua03029
]
114597653 (ATG16L1)
Membrane trafficking [BR:
pmua04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
114597653 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
114597653 (ATG16L1)
Mitochondrial biogenesis [BR:
pmua03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114597653 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ATG16
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_DCAF12
NBCH_WD40
Ge1_WD40
Beta-prop_WDR19_1st
Beta-prop_HPS5
CCDC93_CC
Beta-prop_NWD2_C
Fez1
GAS
Phostensin_N
Beta-prop_WDR19_2nd
INO80F
HTH_6
AP5B1_middle
Lipoprotein_6
Vps39_1
HEF_HK
Synaptobrevin
FUSC
PUMA_CC
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
114597653
NCBI-ProteinID:
XP_028586538
UniProt:
A0A670IMA5
LinkDB
All DBs
Position
5:complement(59880616..59900057)
Genome browser
AA seq
623 aa
AA seq
DB search
MSSGLRAASLPAWKRHILDELRRRDRLQRQAFEEIILQYNKLLEKSDFHSVLADKLQVEK
YDLPSRHEISPGHDGARNDSHMQEIAQLRIKHQEELTELHKKRGELAQSVIDLKNQIQQK
DSEMQTNNTKIVEYLQKISELETECQDLRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQAKLQKELAEAAKEPLPIEQDDDI
EVLADETSDPADETSPVRAVNRTASKRHSQPAGGLLDSITNIFGLSESPLLGHHSSDTAR
RRSLSSCPTPQDNVEAHPGASKEVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGLDR
RVKLWEVCGEKCELKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDHRLRHTL
TGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDLVCTEQCVMS
GHFDKKIRFWDIRTECVVQEMELLGRITSLDLNPERTELLTCSRDDLLKIIDLRVSAIKQ
TFSAQGFKCGSDWNRAVFSPDGNYVAAGSADGSLYIWNVLTGKVERVLSKHHSNSINAVA
WSPSGAHVVSVDKGNKAVLWSEF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctggactcagggcagcgagcctccccgcctggaagcggcacatcctggacgaa
ttgaggcgacgggaccggctgcagagacaggcctttgaagagattatcttgcagtataac
aagctcctggagaagtcagatttccattcagtgctggctgacaagctacaagtggaaaaa
tatgacttgccaagccggcatgagatcagtccaggacatgatggtgcaaggaatgattct
cacatgcaagaaatagcccagcttagaattaagcatcaagaggagctgacagagctgcac
aagaaacgtggcgagttggcccagtctgtgattgacctgaaaaaccaaatacaacagaag
gacagtgagatgcaaacgaataatacaaagattgtagaatatttgcagaagatatctgaa
ctagagacagagtgccaggacctgcggaacaagctacaagatcttgaaagagccaatcag
actcttaaggatgagtatgatgcactccagattacctttactgcccttgaagaaaaactg
agaaaaactacggaagataaccaagagctggtaacacgctggatggcagagaaagctcaa
gaagctaatcggctcaatgcagaaaatgagaaagattccagaagacggcaagccaagctt
cagaaggaactagcagaagctgcaaaagagccgctgccaattgaacaggatgacgatatt
gaagtgctggcggatgaaacctctgaccctgctgatgagacatctccggtgcgcgctgtc
aatcgaacagccagtaagcgacactcccagccagctggaggccttctcgactctatcact
aatatatttggtctgtctgagtctccccttttgggacatcactcttctgatactgccagg
agacgctctttatcctcatgccccacccctcaagataatgtggaggcacatccaggcgca
agcaaagaggtgcgagtccctaccaccgctctgtgtgtctttgatgcgcacgatggggag
gtgaatgcggtgcagttcagccctggctcccggttactggcaacaggaggcttggaccgg
agagtcaaactctgggaagtttgcggagaaaagtgtgaacttaaaggctctctatctggc
agtaatgcagggattacaagcatagagtttgatagtgcgggctcttatttattagccgct
tcaaatgactttgccagtaggatctggactgtggatgatcatcggttacggcacacgctc
acggggcacagtggaaaagtcttgtcggccaaattcctattggacaatgcgcgcattgta
tctgggagtcacgacagaaccctcaaactgtgggacctgcgcagcaaagtctgtataaaa
acagtgtttgctggctccagctgcaatgatctggtctgcacagaacagtgtgtgatgagt
ggacacttcgacaagaaaattcgcttttgggatattagaactgagtgtgtggtacaggaa
atggaattgcttggtaggattacatctctagatctcaacccagagagaacagaactcctc
acctgttcacgagatgacctattgaagattattgatctcagagtcagtgctatcaaacag
actttcagtgctcaagggtttaaatgcgggtctgattggaacagagctgtattcagccct
gatggaaattatgtggcggctggctcagcagacgggtcactctatatttggaatgtgctt
actgggaaagtggagagggtcctctccaagcatcacagcaactcaatcaatgctgtggcg
tggtcaccatctggagcccatgtggtcagtgtggacaaaggaaacaaggctgtgctgtgg
tctgaattttga
DBGET
integrated database retrieval system
