Podarcis muralis (common wall lizard): 114597687
Help
Entry
114597687 CDS
T06059
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114597687 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114597687 (VPS8)
Membrane trafficking [BR:
pmua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114597687 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
zf-RING_Vps41
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
zf-RING_11
Clathrin
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
114597687
NCBI-ProteinID:
XP_028586645
LinkDB
All DBs
Position
5:60834814..60920962
Genome browser
AA seq
1411 aa
AA seq
DB search
MEDELKMESQNLDQDQGPFVADESSQQPLCQETSSPKLSVTELSRELDSKSELIDDKEFD
IPQVDTPPTLESILNETDDEEEPFVLEDPSLLNIDNIDTHSYDTSSVASSDSGDRTHLKR
KKKLRDSFSIHGSVIRLSLLKGISAQIVSAAAKVDAGLPTAIAASSLIAVGTSHGLALIF
GKDPNQALRLCLGSTAVGAQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSIT
DAHPPGTAILHIKFTDDPTLAICNDSGGSVFELSFRRVMGVRTCESRCLFSGSKGEVCCI
EPLHAKTELRDHPITQYSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHF
VAVQTSVNPVLAFCRGDVVHFLLVKRDESGAIHVTKQKQLHLHYDLINFTWINSRTVVLL
DSVEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSIS
NCGGQIFYLGTKSVHVMTLRSWRERIDHLLKQDCLNEALALAWSFHEGKAKAVVGLSGDE
QKRKAVVADRMVEILIHFADRTMKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRMDLLF
SQMYDKMSENSVAKGVFLECLEPYILSDKLMGITAQIMKDLLLHFQDKNLMANMEACIVH
MDITSLDIQQVVLMCWENRLYDAMIYVYNSGMNDYITPMEKLFKVIAHPLSAGKSLSDEQ
VIMGNKLLVYISCCLAGRAYPLGNIPEDLVPLVKNQVFEFLIRLHSAEAPTDEEVYPYVR
TLLHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFL
ARQLAKPNNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEENRLIH
MAEKAEFYQICEFMYEREHRYDKIIDCYLRDPLRKEEVFTYIHNILSIPGYNTEEKQSVW
QKAMKHIEELLSVSPFKAADLISVHFSEQIEQIIQNLQDQCLLFQFLRSLLDPREGVNQE
LLQLSPFVTEQFIELLCRYDPDQVLETLQFLESYRLEEAIQITQKYQLHEASSYLLEKKG
DIHGAFLVMLEWLQSKLLTLTCEDESSIEFPSLKDIEDSLAKTIALCQRNSHKLNQPQRE
ALWFPLLEAMMSPQKLSSSTALCHYSEFLKNLTMQVLNNMAAFIALPLILQKILQDPVYG
RGKLGEIQGLVLGMLDSFNYEQTLLETTTNLLNHDLHWSLRNLKASVTRGLNPKQDYCCI
CLQQYKRRQETADQIIVFSCGHLYHSLCLLSKECGTETEGQMRWTCFKCNASNKGGKLSG
ACLEMKKGTPVSLAQTNSEAILDPQQAQAFDQLCRLYRGTSRLALLAELSRDRGGEKHGL
LHISQGDSALNSVFQNETFQLHLTPPPLVED
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaactgaagatggagagtcaaaaccttgaccaagatcaaggtccctttgtg
gcggatgaatcaagtcagcagccattgtgccaggaaacctcttcccccaagctgtctgtg
actgaactgagtagagagttggactccaagagtgagctgatagatgacaaggagtttgat
attcctcaggttgatactcccccaacactggaaagtattttaaatgagactgatgatgaa
gaagagccgtttgttcttgaggatccttcccttctaaatatcgataacattgacactcac
tcatatgatacttcatctgtagcgagctctgacagtggcgatagaacacacctgaaaagg
aagaagaagcttcgtgattctttctccatccatggctctgtgatacggctgtcccttctg
aaaggaatctctgctcagatagtttctgcagcggccaaagtggatgctggcttacccact
gcaattgcagcatcaagtctcatagcagtgggaacatcccatggactggcactgatattt
ggcaaagatcctaaccaggctcttcggctttgtttgggcagtaccgcagttggagcacag
tatggggctatatctgctcttagcatcaacaacgattgttcaagacttctgtgtggtttt
gcaaaaggacagattacaatgtgggatctggctagtggaaagcttttgagatcaataaca
gatgctcatcctccaggaacagcaattttgcacattaagtttacagatgatccaacgcta
gcgatttgcaacgacagtggaggctcagtattcgaactctctttcaggagagtcatgggt
gtgagaacatgtgagtcacgctgcttgttcagtggttccaagggagaagtctgctgcatt
gagcctttacatgcaaagactgaactgagagaccatcccatcacccagtactccctgctt
gcaatggcttccttaacaaagattcttgtcattggcttgaaaccgtctttgaaagtgtgg
atgactttcccatacggtcgtatggacccctccagtgttccattgctagcatggcatttt
gttgctgtgcagacatctgtgaatcccgtgcttgccttctgccgaggagatgttgtccat
ttccttctggttaagagagatgaatctggagcaatacatgttacaaagcagaagcagcta
catctccactatgacctcattaattttacatggataaattcacgcacagtggtgcttctg
gatagtgtggagaaactgcatgtgatagatcgtcagacgcaggaggaacttgagactgtg
gagatctcagaagtccagttggtgtacaacagcagccatttcaaatcattggctacagga
ggcaatgtcagccaagcactggcgctggtgggggagaaagcttgttaccagtcaatcagc
aactgtggtggtcaaatattttatttaggtacaaagtctgtccatgtgatgacactgaga
agctggagagagagaatagatcaccttctgaaacaagactgccttaatgaagcactggct
cttgcttggtcctttcatgaagggaaagccaaggctgttgtagggttatctggagatgaa
cagaaacgaaaggctgttgttgcagacagaatggttgaaattcttatccattttgctgat
cgaacgatgaagaaatgtcctgatcagggtaaaatccaggtgatggagcagcactttcag
gatatggtgcctgtcattgttgattactgccttctgcttcagcggatggatctgttgttt
agccagatgtatgacaagatgagtgaaaattctgtggcgaagggtgtctttctggagtgt
cttgagccatacattttaagtgataaattgatgggaattacagctcaaattatgaaagat
ttactgcttcacttccaagataagaatttaatggcaaacatggaggcttgcattgtacat
atggatatcaccagcctagacatacagcaggtggtcctcatgtgctgggagaatcgtttg
tatgatgccatgatctatgtctacaacagtggcatgaatgactatattacaccaatggag
aaattgttcaaggtcattgctcatcctcttagtgctggaaagtctctctcagacgagcaa
gtcatcatgggcaacaagctgcttgtctatataagttgctgtttggctggtcgagcttat
ccactgggcaatatccctgaagatctggtacctttggttaaaaatcaggtctttgaattc
ctcattcgtttgcactcagcagaggcacccaccgatgaagaggtttacccttatgtccgc
acactgctgcacttcgatacacgagagttcctcaatgttcttgcactgacatttgaagac
tttaagaatgacaagcaagctgtagagtaccaacagagaattgtggacatccttctgaag
gttatggtggagaattctgattttaccccctcacaagttgggtgtctcttcactttcctt
gcccgacagcttgctaagcctaacaacacactgtttgtaaataggacgctatttgatcag
gtccttgaatttctctgcagtcctgatgatgattcacggcactctgagagacagcaggtt
cttctagaattgctccaagctggaggcatagtacagtttgaagagaacagactcattcac
atggcagaaaaagctgaattctatcaaatctgcgagtttatgtatgaacgggaacatcgc
tatgataagataattgattgctacttacgagatccattgagaaaggaagaagttttcact
tacatccacaatatactctccattcctggatataacacagaagaaaaacagtctgtgtgg
caaaaagctatgaaacacattgaggagctgctgtcagtgagtccctttaaagcagccgat
ctgatttcagttcacttcagtgagcagattgaacaaataattcagaaccttcaggatcaa
tgtttgcttttccagtttttgaggagcctccttgacccaagggaaggtgtcaatcaagag
ttgcttcagctttctcccttcgttactgagcagtttattgagttgctgtgtcggtatgat
cctgaccaggttttagagactttgcaattcctggagtcctacaggctggaagaggcaatt
cagatcacacagaaataccaactccatgaagcttcttcctatctacttgagaagaaagga
gatattcatggtgccttcctagttatgcttgagtggctgcaaagcaagttgttgacactt
acatgtgaagatgaaagttcaatagaatttccttcattaaaggatattgaagatagctta
gcaaaaacaattgcactttgccagaggaattcacacaagttaaatcaaccacagcgagag
gcactatggtttccactcttagaagcaatgatgtctccccaaaagttatccagttctact
gcactgtgtcattactctgaatttttgaagaacttgacgatgcaagtgttgaacaacatg
gcagcattcattgccctgccactgatcttgcagaaaattctacaggatccagtctatgga
agaggaaaactgggagaaattcagggtcttgtcctgggcatgctagacagctttaattat
gaacaaactcttttggagactacaaccaacctactcaaccatgacctccactggtcctta
cgtaatttgaaagcatctgtgactagagggctgaaccccaagcaagattactgttgtatt
tgtctacagcagtacaagagaagacaagagactgctgaccaaatcatagtcttcagctgt
ggccacttgtaccactctctctgcctcctgagtaaagagtgtggcactgaaacagagggc
cagatgagatggacttgttttaaatgcaatgcaagtaacaaaggaggaaaactaagtggt
gcttgcttagaaatgaagaagggaactcctgtatctctggcacagaccaattctgaggcc
atcttggatccacagcaagctcaagcttttgaccagctttgtcgtctgtaccgaggaaca
tcgaggttggctcttctggctgaactctcacgggaccgtggtggagaaaaacatgggctc
ctccatatctcccagggtgattctgcactgaatagtgtcttccagaatgagaccttccaa
cttcacctcactcctcctcctctagtggaagactaa
DBGET
integrated database retrieval system
