Podarcis muralis (common wall lizard): 114597811
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Entry
114597811 CDS
T06059
Symbol
COL4A3
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04382
Cornified envelope formation
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04518
Integrin signaling
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114597811 (COL4A3)
04518 Integrin signaling
114597811 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114597811 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114597811 (COL4A3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114597811 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114597811 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114597811 (COL4A3)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114597811 (COL4A3)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114597811 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114597811
NCBI-ProteinID:
XP_028586950
LinkDB
All DBs
Position
5:71140027..71214257
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AA seq
1682 aa
AA seq
DB search
MKEPARPGSGCLALLFLAALLSASQGQQEDRLPIAVAAKNCVCNGKSHCSCDAIKGSKGE
KGFPGFPGPPGQMGFPGPEGPPGPQGPKGFPGPAGFVGPKGSRGLPGVPGYSGPPGLPGE
AGNAGAPGRPGIPGCNGTKGEQGFPGFPGQGGLPGLPGPKGIKGEKGCSASGYDQGYSSQ
GDPGLPGMPGFQGDPGPRGLPGLIGPEGPPGFPGALGRPGLPGPKGLMGVKVIGAKGLKG
DNGLMGPPGPTGTVIVTLTGAENMTELKGNKGDIGSPGPPGPPGDSGSPGDFRSAKGDPG
EAGPQGRPGKDGTPGPPGLLGEKGEQGLPGRPGKVGPKGQKGEIGSKGIRGPTEYYDELP
GEKGNQGYPGLPGLKGQFGAPGPRGPPGATGRPGVSRPGPRGLTGPPGLKGSKGDRGQPG
MNAIGPPGLPGLQGRPGPAGSPGLSGPPGIITFERGPLGPPGTPGCIGPPGLSGDSGAKG
EEAGPCDQCTFLTGPPGLPGVPGAQGEQGVKGIEGALGPKGSQGTPGIQGPPGIQGLPGL
PGNQGLKGLKGEPGYAEPEGPKGDRGEPGQRGSSGENGADGLPGKPGLKGSRGSVGEPGP
DGTKGDRGAPGSVGISGLPGERGLPGPPGYGPPGVEGSKGSQGNPGLPGLVGEAGPKGEP
GQVNAIPGPPGLRGPDGRPGPQGERGSVGSRGPRGYPGLPGPEGDPGFSEYGFPGYPGIK
GDKGSPGPTGPPGCPGQLGEPGLPGKPGIPGEKGEPGPVIPGQQGRLGSPGVDGMPGEKG
ERGFPGLPGLQGQRGRDGADGPRGEPGSPGVPGEKGVPGKIGDCLIGLPGPPGLCGLMGP
PGKRGVLGAKGDPGFPGLDIPGFPGPFGLPGLPGPQGDEGSPGIKGQPGRPGVPGVPGLR
GEIGLMGTVGNPGLPGVFGNPGIRGSRGSPGFPGPKGRKGSSGEKGEPGDKGSPGTSESK
VSFGDKGDRGPKGFPGRLGLKGEKGEQGLKGCIGPDGLPGRPGPPGSKGDKGLPGILGGQ
GSTGAPGDRGDMGVPGSKGERGSSGLPGSPGIPGPPGLLGIPGDKGEPACPGSGPPGDPG
PEGDPGPPGERGRKGESGSPGRPGLVGEPGLPGNRGESGLPGIPGQSGPTGSNGIKGTKG
LPGQNGIRGSPGSPGLLGDDGPPGEKGSQGQDGIPGPPGEKGAQGSPGQQIPGPPGIPGP
KGVKGDIGVPGIPGPPGMKGSMGDQGPIGPPGLPGQPGLPGKPGAIIAGQKGNRGPPGPD
GKPGVPGIPGPAGLPSYSIKGNKGVRGNDGLPGPPGTRGDLGLPGPAGTEGIPGYQGPRG
EPGFXGFPGIKGEMGNQGPPGQIGVPGPAGSKGPPGPPGAPVAAVSFPGNPGPAGPPGNL
GSPGDPGPRGPPGPPGPPGVKGQLGRLGIPGIPGPPGLKGDKGFQGPKGLPGMLGFPGEK
GLPGFPGSCLTGPVKRGFIFSRHSQSTEIPSCPSGTSQIYSGYSLLFVQGNEQAHGQDLG
SAGSCLQRFTTMPFLLCNPSNVCRFASRNDYSYWLSTAEPMPLDMAPISGKALEPYISRC
TVCEVPAVMIAVHSQTTSVPPCPQGWQSVWKGYSFVMYTGAGSEASGQALASPGSCLEKF
HAIPFIECHGRGTCNYYSNSYSFWLASINPRRMFRKPLSQTLKAGEMEKIISRCQVCMRR
PS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagcccgcgcgccccggctccgggtgtctcgcgctgttgtttctcgctgccctg
ctgagcgcttcgcaggggcagcaggaggaccgcctccccattgctgtggctgcaaagaat
tgtgtctgcaatggtaaaagccactgttcttgtgatgcgatcaaaggcagtaagggtgaa
aagggctttcctggtttccctggtccacctggtcagatgggttttcctggtccagagggt
cctcctgggccacaaggaccaaagggttttccagggccagcgggctttgttgggcctaaa
ggttcaaggggtttgccaggagtccctggttattcaggtcccccaggccttcctggcgaa
gcaggaaatgcaggtgctccaggacgtccaggtataccaggttgcaatgggacaaagggc
gagcagggattcccaggattcccggggcaaggagggctcccaggattaccaggtcctaaa
ggaatcaaaggagaaaaaggatgttccgcaagtgggtatgaccagggttatagttcccaa
ggtgatcctggattgccaggaatgcctggatttcagggtgatccaggacctcgaggatta
ccagggctgatagggccagagggccctccaggctttccgggagcactaggaagaccagga
cttccagggccaaagggtcttatgggtgttaaagtcattggtgccaaaggattaaagggt
gacaatggactaatgggccctccaggaccaactggaacagttattgttaccctaactgga
gcagaaaatatgacggaattaaaaggaaataaaggagatattggttctccaggaccccct
ggaccacctggagattcaggctcacctggtgattttcgaagtgcaaaaggagatcccgga
gaggcaggacctcagggtagacctggaaaggatggaactcctggtccacctggcttgctg
ggagaaaaaggagaacagggtttgccaggaagacctgggaaagttggtcccaagggacag
aaaggtgaaatcggcagcaaaggaattcggggtccaacagagtattatgatgaattgcca
ggtgaaaaaggaaaccagggctatccaggactcccaggactcaaaggccagtttggagca
cccggaccacggggtcccccaggtgccactggaaggccaggtgtttcgagacctggtcca
agaggtctaacaggccctccaggcctcaaaggaagtaaaggagatagaggacaacctggc
atgaatgccattggacccccaggacttcctggattgcaaggaagacctggcccagcagga
tccccaggtctttcaggaccaccaggtataataacttttgaaagaggcccactgggaccc
ccaggaaccccaggatgcattggacctccaggcctttcaggagatagtggagcaaaaggt
gaagaagcaggcccatgtgaccagtgcacctttttgacggggccacctggccttcctggt
gttcctggagcacagggtgaacaaggagttaaaggtatagaaggagcattggggcctaaa
ggatcccaaggaacccctgggattcaggggcctcccggcattcagggacttccaggtctt
ccaggaaaccaaggccttaaaggattgaaaggtgagccagggtatgcagaaccagaaggc
ccaaaaggagacagaggagaaccaggacaaagaggaagctcaggagaaaatggtgcagac
gggctacctgggaaacctggactgaaaggctcaagaggttctgtgggagaaccgggacct
gatggcacaaaaggagacagaggtgcaccaggatcagttggtatctcaggtcttcctgga
gagagagggctacccggaccaccaggatatggaccaccaggagtggaagggtctaaggga
tctcaaggaaatcctggtttgcctgggttggttggagaagcaggtcctaaaggtgagcct
ggtcaagtaaatgcaattcctggacctcctggacttcgagggccagatggtaggcctgga
ccacaaggagaaagaggtagtgttggatccagagggccacgtggatatccaggcctccca
ggaccagaaggtgaccctggcttttcagaatatggatttcctggctatcctggcattaaa
ggagataaagggtctccaggacccacagggccaccaggctgtcccggacaattaggggaa
ccaggcttacctggaaaacctggaattcctggagaaaagggtgaaccaggcccagttata
cctggacaacaaggcagactgggttcaccaggagtagatggcatgccaggtgagaagggc
gaaagaggatttccaggacttccagggctccaaggtcaacgaggtcgtgatggtgctgat
gggccaagaggagaacctgggtcccctggagttccaggagaaaagggtgttccaggaaaa
ataggtgactgtcttattggcttaccaggcccaccaggtctatgtggattaatgggcccc
ccaggaaaacgtggagttctaggagccaaaggagacccaggttttccaggattagacatc
ccggggttcccaggaccatttgggctgcctggattacctggcccacaaggagatgaagga
tctcctggcatcaagggacaacctggcaggccaggagtaccaggtgtaccaggtctaaga
ggagaaataggcttgatgggcactgtgggtaatcccgggctacctggtgtctttggaaat
ccaggtatccgtggcagcaggggttctcctggcttcccaggaccaaaaggaagaaaggga
tcctcaggtgaaaaaggtgaaccaggtgataaaggttctcctggaacatcagagtccaaa
gtgagttttggagataaaggagacagaggacctaaaggatttcctgggagactgggactc
aagggagaaaagggagagcaaggtctgaaaggatgcataggacctgatggactaccagga
aggccaggcccaccaggttccaaaggagacaagggacttccaggaattcttggtggacag
ggatcgacaggagctccaggagacagaggggacatgggagtgccaggttctaaaggcgaa
cgaggttcttctggtttgcctgggtcaccaggaataccagggccacctggcttgcttggt
attccaggggataaaggagaaccagcctgtcctggatctggacctcctggggacccagga
cctgagggtgatccaggtcccccaggagaaagaggaagaaaaggtgaaagtggatcacca
ggccggccagggcttgtcggagaacctggactacctggaaacagaggggaatctggttta
ccaggaattccaggacaatcaggacctactggcagtaatggtattaaaggcactaaagga
ttaccaggacaaaatggcatcagaggctctccaggttcacctgggttactgggtgatgat
ggaccacctggtgagaagggtagccaaggacaggatggtatccctggacccccaggagag
aagggagcacaaggttctccaggacagcaaattcctggtcctccaggcattcctggtcct
aaaggtgtcaaaggagacattggggtgcctggtataccagggccaccaggtatgaaaggt
agtatgggagaccagggaccaattggacctccaggcttacctggacaaccaggacttccc
gggaaaccaggtgcaataattgctggccaaaaaggaaacagaggcccccctggtcctgat
ggaaaaccaggtgttcctggtattccaggacctgctggactccctagctatagtattaaa
ggaaataaaggtgttcgaggaaatgatggcttaccaggcccgccaggaactagaggtgac
cttggtctacctgggccagcaggaactgaaggcatccctggctatcaaggtcctagaggt
gaacctggtttcnccggattcccaggcatcaaaggagaaatgggtaatcaagggccacct
gggcaaataggagtaccaggacctgcagggtcaaagggaccacctggtccgcctggagca
cccgtggctgctgtctctttcccaggaaacccaggacctgctggacctccaggaaaccta
ggaagcccaggagatccaggtcccagaggaccaccagggccgccaggacctccaggtgta
aagggccagctaggtcgtcttgggatacctggcatacctgggccacctggactaaaagga
gacaagggctttcaaggcccgaaaggtttgcctggaatgcttgggtttcctggtgagaag
ggactcccaggattcccaggaagttgcttaacgggcccagtcaaaaggggcttcatcttt
tctcggcacagccagtcaacagagattccgtcatgtccatctgggacatctcaaatctat
agtggttattctctcctttttgtacaagggaacgagcaagcacatgggcaagatcttggt
tcagccggtagctgccttcagagatttactaccatgccttttttattatgtaatcccagt
aacgtttgccgatttgcttcccgcaatgactattcatactggctgtcaacggcagagcct
atgccattagatatggcaccaatttctgggaaagctttggagccttatattagcagatgc
actgtctgcgaagtccctgcagtgatgatagcagttcacagccaaaccacttcagttcca
ccatgtcctcaaggctggcagtctgtttggaaagggtattcttttgttatgtacacaggt
gcaggctcagaagcttctggacaagcgctggcatctccaggatcatgcttggaaaaattt
cacgccattccatttattgaatgccatggccgagggacatgcaattattactcaaactcc
tacagcttctggctggcttcaataaatccaagaagaatgttcaggaaaccattgtcgcag
actctgaaagctggagaaatggaaaaaatcataagtcgctgccaagtctgcatgaggaga
cccagctaa
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integrated database retrieval system
