Podarcis muralis (common wall lizard): 114597812
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Entry
114597812 CDS
T06059
Symbol
COL4A4
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04382
Cornified envelope formation
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114597812 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114597812 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114597812 (COL4A4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
114597812 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114597812 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114597812 (COL4A4)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
114597812 (COL4A4)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114597812 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
114597812
NCBI-ProteinID:
XP_028586951
LinkDB
All DBs
Position
5:complement(71070782..71139993)
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AA seq
1680 aa
AA seq
DB search
MCSLKRITFIFTAACWLLFVLSLQPVKGGQYAYISRCGGQDCTACQCFPEKGSRGQPGQM
GPQGPIGALGSIGPIGLPGVKGQRGDIGLPGPSGQRGSQGPTGVPGFSGLDGIPGLPGPD
GPRGKPGLDGCNGSRGDPGFPGEAGRIGPRGSFGIPGQKGEKGNSVYVSQFIKGPSGERG
DPGARGMPGPRGERGPRGPPGFPGQPGIQGTTGPPGLSGEQGNPGIGVEGQKGEPGDVGP
PGSAGQPLLVGPPDSQLLKGEKGVKGMPGTIGAKGLPGRKGSLGIGEKGERGIPGFPGLR
GSPGSYGSPGIPGSKGETGMAGFPGEDGLPGIKGDLGESGLPGPPGPRGIPRPGIKGLQG
DPGDPGPPGNVGADGLTGPPGAYGRQGEDGASIPGPKGILGVQGPQGFRGDPGLPAIADM
ALGRPGSPGLPGFPGTPGKQGLPGPPGVACTGRGSPGPSGAKGQKGSPGERGAKGEKGSA
SSCLCGAGPCGAPGIRGPPGVPGRKGEVGLPGKYGRTGDPGLPGALGPPGSPGIPGPFGL
TGEKGDKGDPARIRIKGIKGQRGLQGEPGFPGRNGIAGRNGELGLPGEKGFKGLDGRALP
GDKGFPGSPGLPGPKGPIGPTGFGIQGLQGVRGLPGSPGSPGIRGPPGPKGEKGATLPYT
AAYPGNPGAPGFKGISGPKGLQGQPGRAGPNGFDGFKGQQGRPGIPGNPGPEGFRGETGD
QGAQGESGPRLDGAPGLPGPPGFDGPKGILGDNSYGPPGIPGNRGRPGLPGLQGLRGEPG
FAGVQGRPGIPGFPGAKGLRGRKGDIGVPGGPGSPGLPCDKGLQGLPGPPGSFGPPGFPG
LQGFKGPKGDMGAPGPAGMKGMPGFPGVQGPPGLPGLRGKPGLPGENGLPGRPGQKGSQG
SQGMQGFPGLPGSEGEMGALGMKGEEGQAGLHGPPGECGSMGLKGERGPPGEDGRVFILK
EKGQKGEPGFPGDKGIPGTQGDKGNTGFRGIPGSPGRNALPGTRKGEPGDAGQAGFQGPP
GLPGPTGLRGITGFQGPQGDQGAQGLPGIPGSSGLDGAKGSKGNRGDPAVSYGQPGKKGP
AGDRGLPGLDGLPGDQGITGVQGRPGRQGPKGLTGYSGTPGFPGIQGAAGIPGAPGEQGN
PGLLGAPGFQGLPGSPGRKGLSGPPGLNGLNGLQGQKGLPGSPGLSEMGPAGCIGEPGPK
GNRGEPGLPGISRPGPPGDAGLLGPPGKPGASGSAGPMGQPSVNIIPGPPGDQGPAGLDG
VRGLPGKPGPPGKTILIKGDPGDCGAXGAPGAPGPPGKPGPKGISGNQGREGSKGPTGNP
GPQGPPGAPGEPGDQGLRGSTGCMGPKGCRGDPGEPGSVDYSSCPKIPGPPGVLGPRGSP
GVVGLRGPAGFPGPPGEKGEEGSLGQQGQDGLPGPPGPPGDEGNIGEKGYTGLQGFPGEI
GMPGPPGPDTRAPGGFLIVVHSQSDQVPLCPEGMPRLWTGYSLLYLEGQEKAHNQDLGLA
GSCLPVFSTMPFAYCNIHQVCYYASRNDKSYWLSSAAPLPMMPLSEEEIQPYISRCAVCE
APAQAVAVHSQDQSIPPCPSNWGSLWIGYSFLMHTGSGDQGGGQSLMSTGSCLEDFRSAP
FIECQGQRGTCQFFTNEYSFWLSTVNPEMQFTSVPRPETFKDEQEQRRNVGRCQVCMKYG
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctttaaaacggattacatttattttcacagctgcatgttggctgctatttgtt
ctttcactccaaccagttaaagggggtcagtatgcatatattagtcgttgtggtggacag
gattgcacagcttgtcaatgttttcccgagaaaggctcaagaggacaacctggtcagatg
gggccccagggcccaattggggctttgggttcaataggacccattggtttgccaggagta
aaaggccagaggggtgatattggtctgcctgggccaagtggacaaagaggaagtcagggt
cctactggcgttccaggattttcaggtttagacggtatacctgggttaccaggacctgat
ggacccagaggtaagcctggcttggatgggtgcaatggctcaaggggagatccaggattt
cccggagaggctggtcgtattggcccaagaggctccttcggtattcctggtcaaaaggga
gaaaaaggaaattctgtgtatgtttctcagttcattaaagggccttcgggagaaagaggg
gatcccggagcccgtggcatgcctggccccagaggagaaaggggacccagaggtccacca
ggatttccaggccaaccaggcatacagggtactacaggtcctcctggtctgtcaggcgag
cagggaaatccaggaattggcgtggaaggacagaaaggggagccgggtgatgttggacct
cccggatctgccgggcagcctttattagttggacctcctgattctcaactgttaaaggga
gaaaagggtgtaaaaggaatgcctggaactataggtgccaaaggattgcctggccgcaaa
ggttcacttggaattggagagaagggtgaaagggggattcctggctttcctggattgcgg
gggagtccaggttcttatggatcaccaggaattccaggaagcaagggtgaaactggaatg
gctggatttcctggagaagatgggcttccaggaattaagggggatctaggagagagtggg
ctgccaggtccaccaggacctcgaggaataccacgccctggaataaaaggtcttcaagga
gaccctggagaccctggacctcctggaaatgtgggggcagatgggttgacgggccctcct
ggtgcatatggcaggcaaggggaagatggagccagtatccctggtcccaaaggtatattg
ggagtacaagggcctcagggctttcgaggtgaccctggtctccctgctatagctgacatg
gcactaggaaggcctggctctccagggttgccgggttttccaggaacaccaggaaagcag
ggtttgcctggaccacctggtgtggcttgtactgggagagggtctcctggaccatcggga
gctaaaggccagaagggatcacctggagaaagaggtgcaaaaggagagaaagggagtgca
agtagctgcttatgtggtgctggtccttgtggtgcacctggaatacgaggtccgccaggt
gtccctggaagaaaaggagaagtagggttacctggaaaatatggaagaacaggtgatcca
ggcttacctggtgcattagggccaccaggttcccccggaataccaggtccatttgggttg
actggtgaaaaaggtgataagggtgacccagctagaataagaataaaagggataaaagga
caaagaggtcttcaaggggagcctggatttcccggaagaaatggtattgctggcaggaat
ggagaactaggactgcctggtgaaaagggctttaaggggcttgatggaagagctttgcca
ggtgataagggatttcctggttcccctggacttcctggccccaaagggccaataggacca
acaggttttggaattcagggtctgcaaggtgtccggggtctgcctgggagtccaggaagc
ccgggtattagaggaccacctggcccaaaaggtgaaaaaggtgctactcttccttacaca
gcagcataccctgggaatccaggtgcacctggttttaaaggtatatcaggcccgaaagga
ttgcaagggcagcctgggcgagctggtcccaatggttttgatggcttcaaaggccaacag
ggcagaccaggaataccaggcaatcctggtccagaaggtttcaggggtgagactggtgat
caaggtgcacaaggtgaaagtggtccaaggctggatggagctccagggttgccaggtcct
cctggttttgacggtccaaaaggcattttaggtgacaacagttatggccctccaggaatt
ccaggcaacagaggtcgtcccggcttaccaggcctgcaaggcttaagaggtgaaccaggt
tttgctggcgttcaaggacggcctggtatcccaggatttccaggagcaaaaggtctcaga
ggtagaaaaggtgacataggagtcccaggaggccctgggtcacctggtctgccatgtgac
aaaggcttgcaggggctgccaggacctccaggctcttttggaccaccaggctttccaggt
ttacaaggcttcaagggtcctaaaggtgatatgggtgcaccaggcccagctggaatgaaa
ggcatgcctggctttcctggagtacaagggccacctggcctcccaggcttaagaggaaaa
ccaggtcttccaggggaaaatggattgccaggccgcccagggcaaaaagggagccaaggg
tcccaaggaatgcagggcttcccaggactcccaggaagtgaaggagaaatgggagcactt
ggtatgaaaggtgaagaaggacaagcaggtctacatggccctccaggagaatgtgggtct
atgggattaaagggtgaaagaggacctccaggagaggatggccgtgttttcatattgaaa
gagaaaggacaaaaaggggagccaggctttcctggtgataaaggcatcccaggaacacag
ggtgataaaggcaacactggattcagaggaatcccaggatcgccaggcagaaatgcactt
ccaggtactcgaaaaggcgaacctggcgatgctggacaggctggttttcaagggcctcca
ggtctcccaggacccacaggactgagaggaatcactggctttcaaggaccacaaggtgac
cagggtgcacagggattgccagggattccaggaagttcaggacttgatggtgcaaaagga
tctaaaggtaacagaggtgacccagctgtctcttatggccagcctggtaagaaaggtcct
gcaggagatcgaggattgccaggacttgatggattaccaggggaccaaggaatcacaggt
gttcaagggagaccaggaagacagggacctaaaggactaactggatactcaggaacacct
ggcttcccaggtatccagggagctgcaggcattccaggagcaccaggtgaacaaggtaac
cctggtcttttgggagctccaggttttcaaggattacctggcagtcctgggagaaaaggc
ctttcgggaccgcctggattaaatggcctgaatggactacagggtcaaaagggcttgcca
ggatctccaggtttaagtgaaatggggcctgcaggatgcataggagaacctgggccgaaa
ggcaacagaggagaacctggactaccaggaatttcccgtccgggtccccctggagatgct
ggactactaggtccccctggcaagccaggtgcttctgggtctgctggtcctatgggacag
ccttctgtaaatataattcctgggcctccaggtgaccaaggccctgctggattagatggt
gttagaggtctccctggcaaacctggtcctccagggaagactattctcattaaaggagac
ccaggtgactgtggggctnttggggcacctggggctcctggtcctcctggcaaacctgga
cctaaaggtatctcgggaaatcaaggaagagaaggctcaaaaggtccaacgggaaatcct
ggcccacagggacctcctggtgcccctggagagcctggggatcaaggtttgcgaggatca
actggttgtatgggtcccaaaggttgcagaggtgacccaggagaacctggaagtgttgat
tattcctcatgtcccaagattccagggcctcctggtgtattgggcccaagaggatcacca
ggtgtcgtgggattaagagggccagcaggtttccctggccccccaggagagaaaggagaa
gaagggtcattgggtcaacagggtcaagatggcttgcctgggccaccaggaccccctggt
gatgaaggtaacataggagaaaaaggatacacaggactacaaggttttccaggtgaaatt
ggaatgccaggtccaccagggcctgacacaagagctcccggtgggttcctgattgttgtt
catagtcaatcagatcaagtgccactgtgcccagagggaatgccaaggttgtggactgga
tatagcctgctgtatcttgaagggcaggagaaggcccataatcaagatcttggtctcgct
ggatcttgtctccctgtgttcagcaccatgccctttgcctattgcaatatccatcaggtc
tgctactatgcaagtcgaaatgataaatcttactggctgtcaagcgcagctcctttgccc
atgatgcccctctctgaagaagaaatacaaccttacattagcagatgtgctgtctgtgaa
gctcctgcccaagctgttgcagttcatagtcaagatcaatccattcctccctgtccatca
aactggggaagcctatggataggctactcatttttaatgcacactggatctggtgaccag
ggaggtggacaatctctcatgtcaactggaagctgccttgaggacttcagatcagcaccc
ttcattgaatgccaggggcagcgagggacatgccaattctttaccaatgaatacagcttc
tggttaagtactgtaaacccagagatgcagtttacttcagtccctcgcccagagactttc
aaagatgagcaagaacaacgccgcaatgtaggtagatgccaggtctgcatgaaatatggc
taa
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