KEGG   Podarcis muralis (common wall lizard): 114598139
Entry
114598139         CDS       T06059                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
pmua  Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmua01009]
    114598139 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pmua04121]
    114598139 (TRIM42)
Protein phosphatases and associated proteins [BR:pmua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     114598139 (TRIM42)
Ubiquitin system [BR:pmua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    114598139 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ariadne Fn3_VIN3 FN3_DSCAM-DSCAML_C Ig_Rha78A_N TRIM_CC DUF3858
Other DBs
NCBI-GeneID: 114598139
NCBI-ProteinID: XP_028587679
LinkDB
Position
5:67268318..67281093
AA seq 733 aa
MPRATCHCCLTCPCCPGCPCCYELVRFRRYLFSRSIFACCLCWRFLFSDERNCDCFYCPH
SEDETCQCCHCTCSQNPNCRCCCCSCANNPHCKYLCCTDENDDCQCYESTCCNYLNYIPY
KHRYRLRRRKLISNSSVISLDKESSGHAFLDQLICPLCQELFLRPFMLPCNHCICDKCIM
KSQLQAEITENFFIITCPICNKAHCLPFAKKIQLRMNYLRARLARKYMRRYGFLRWRFDR
SRLPIYCQLCDERRKATKRCVTCQLNYCNLCLRNFHQDISYQNHVYAKISDEVWEERNCL
IHGDSMISKYCLDDHELLCEYCADAHHTDHDTVPLPLACSKLSAALFGSIAKFKKVRFII
DNDLMEVLVLKNNFKSYKETKRREIRNGFMRLQSILQQREKELMEAVENLEIQKQKALYE
FAEYTSKRIDQMDSLMQYSKEALKEQSQLAFLQSAYGLVVEIEDAIANIYQPSPLLREDP
IKHLKVNFEELAQKLQTIFPALSKKVYDKTGKFPYPCSSDIMIPRDVSSAHVQNPLGMDR
SQSLASFTSLDQDIMNDMYLRPKSLPPNLKDNGMYAIWDAASDTSRSDRRFQNQGIYYNP
ELHEEAQSTTVPGIVIVYQTLVFPTLAKIYWTCPTEEVDSFEVAYYEVVDEEAAENLIQP
QLVGVLTGIAQQNLEIHNLTPNTEYLFKVRAVNEHGPGPWSEICKVVTPEIRAKVKGKWG
LLRNVQSAFHKQS
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgcctcgcgcaacatgtcactgttgcttgacatgtccatgttgcccaggttgtccgtgc
tgctatgaattagttaggtttcggcgttacttgttcagcagatccatattcgcatgctgc
ttgtgttggcgttttctattcagcgatgaacggaactgtgactgcttctactgtccacac
agcgaagatgaaacctgtcagtgctgccactgcacatgctcacagaacccaaattgccgc
tgctgctgctgctcctgtgctaataatccacactgcaagtacttgtgctgcacagatgag
aatgatgactgccagtgctatgaaagcacgtgctgcaactacctcaactatataccgtac
aagcatcggtacagacttagaagacgcaagttgataagcaactcatctgtcatttcgctg
gataaggaatcatcgggacatgcttttcttgaccagcttatttgccctttgtgccaagag
ctgtttctccgaccttttatgttgccatgtaatcactgcatttgcgataagtgcataatg
aagagccaacttcaggctgagatcacagagaacttcttcatcatcacatgccccatttgc
aacaaggcccactgccttccatttgctaagaaaatccagctgcggatgaattacctaaga
gccagattggccaggaaatatatgcggcgatatggttttctgcggtggaggtttgacaga
agccggctaccaatttattgccaactttgtgacgagcgccggaaggccaccaagagatgt
gtgacatgtcagttgaattactgtaatctttgcctgaggaactttcaccaggatatctcg
taccaaaatcatgtctatgccaaaatcagtgacgaagtttgggaagaaagaaactgtttg
atccatggtgattcaatgatctcaaaatactgtcttgatgaccatgaactgctttgtgaa
tactgcgctgatgcccaccacacggatcatgacacagttcctttgccactagcatgttca
aaactgtctgctgcattattcggttctattgcaaagtttaaaaaagtacgatttataatt
gataatgatctaatggaagtccttgtattaaaaaacaattttaagtcctataaagaaaca
aaaaggagggagatcaggaacggtttcatgaggttacagagcatccttcaacaacgggag
aaagagctgatggaggcagtagaaaaccttgagattcaaaaacagaaggcactttacgag
tttgccgaatacacaagcaagagaattgatcagatggacagccttatgcagtattctaag
gaagctctaaaggaacaaagccagcttgcattcctgcagtctgcatatgggctagtagtt
gaaatagaagatgcaattgctaatatttatcagcctagcccacttctcagggaagaccct
attaagcaccttaaagtcaactttgaggaacttgcacaaaagttacaaaccattttccca
gcactttcaaagaaagtgtatgataaaacaggcaaatttccttatccttgcagttctgac
ataatgattccaagggatgtttccagtgcgcacgtccaaaatccattaggaatggatcgt
agtcagtctttagcatcatttacttcattagatcaagacataatgaacgacatgtatcta
agacccaaatccttacctcctaacttgaaagataatgggatgtatgcaatttgggacgca
gcatcagatacttcaagaagcgataggagatttcaaaaccaaggtatctactacaatcca
gaattacatgaagaagcccaatctaccactgttcctggcattgttattgtctaccaaaca
cttgtatttccaactcttgctaagatttactggacatgtcctacagaagaagttgatagc
tttgaggttgcttattatgaagtagttgatgaagaggcagctgagaatttaattcagcca
caacttgtaggagtgctaactgggatcgcccaacagaatctggaaatacataatctgaca
cctaatacagaatatctcttcaaagtccgggctgtcaatgagcatggtccaggcccatgg
agtgaaatttgtaaggtggtgactccagaaattcgtgcgaaagtaaaaggcaaatgggga
ttgctacgaaatgttcaatctgctttccataaacagtcctga

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