Podarcis muralis (common wall lizard): 114598405
Help
Entry
114598405 CDS
T06059
Symbol
TNN
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin-N
KO
K06252
tenascin
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114598405 (TNN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114598405 (TNN)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114598405 (TNN)
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114598405 (TNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
EGF_2
Pur_ac_phosph_N
DUF4998
EGF_Tenascin
Fn3_Dep-1_2nd
DUF4959
DUF460
Ig_ILCR1
Motif
Other DBs
NCBI-GeneID:
114598405
NCBI-ProteinID:
XP_028587901
LinkDB
All DBs
Position
6:3221965..3256163
Genome browser
AA seq
960 aa
AA seq
DB search
MSFWNIVHLKHLNASHQMKQDDLLEFPSGVLLHCPLQGALAQLPTQPENCSGKSQISFSH
SYKIDVPKSSQIKVDPDPRPLQDDSHTLLSTGEMQEGEEQNIIFRHNIRLQAPKGDCELL
GQLKPLLERLEKIELEVRHLRXICAPQRCCGRAQEVSSCSGHGVFIQEICACNCDEGWEG
QDCSRPTCPGNCNGNGRCVGGRCICNARYAGEDCSRLLCPENCSGNGLCVNGVCHCYKEF
IGEDCSEKRCPNDCSGNGYCDTGECYCEDGFIGLDCSKVLAPQNARVLKTTEDSVAIGWD
QVVDVDGYLISYFPVGYEASVKQVRVSKDQTTYEILGLLPGTKYIITLRNVKKGIASDPE
LLQASTEVSAIGAIWVTEETDNSLEVEWENPSTEVDYYKLRISSLLRPGEEKEVLVPKSS
DAKSRYVITGLKPGTQYVITVISMKDEMEGKPSSVNGWTDIDGPTDLVTDQVTEDTATIS
WNGAQAPIDRYVVSYTSADGDTKEIFVGKDKKTTTLVGLHPGMEYTIYIWAVKGTQQSRK
ASITAETEIDGPTNLKTDQATENTATISWNKALAPIDRYILSYTSADGDTREITVGKDKT
STTLTGLKPGMEYVIYIWAMKGSQQSKRTITKTLTEIDPPRNVRVSDVTQSSGLVTWTPP
DAQISGYLITYREPDGTIKEVRLGPNEERFVLEGLTRGTKYTIHIMAFKGDRWSRKTTTT
FSTVSLRYPFPADCSQTQENGHSASGMYTIYLNGDVNRPLQVYCDMATDGGGWIVFQRRN
TGQLDFFKRWRNYVEGFGDPAGEFWLGLEKLHQLTSSAPVPYELRVDLRTHNESAYAVYD
LFQVGSSRERYKLSVGNYRGTAGDAMTYHNGWRFTTWDRDSDIALSNCAITHHGGWWYKN
CHLANLNGKYGEDKHSEGINWEPWKGHLFSIPYTEMKFRPRSHPILGRKRRSLAGKEPRV
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctggaacattgttcatctgaagcatctgaatgcatctcatcagatgaaacaa
gatgatcttttggaatttccttctggggttctgctgcactgccctctccagggagctctg
gcacagctgccgactcaaccggaaaactgctctggcaaaagtcagatctccttcagtcac
tcatacaagattgacgtgcccaagtcctctcagatcaaagtggatccagacccacgtccc
ctccaagatgacagtcacacactgctgtcgactggtgaaatgcaggagggcgaggagcaa
aatattatattcaggcacaacattcgcctgcaggctcccaaaggtgactgtgaactccta
ggccagctcaagcctttgttggaaaggctggagaagatagagctggaagtgcgacatctg
aggnggatctgtgctcctcagaggtgctgtggcagagcccaagaagtttcatcctgcagc
ggccacggagttttcatccaagagatttgtgcctgcaactgtgacgaaggctgggaaggc
caggactgctcccgccctacctgcccaggaaactgcaatggtaacgggcgctgtgttggc
ggccgatgcatctgcaatgcacgctatgctggcgaggattgcagccggctcttgtgtcct
gagaattgcagtggaaatgggctctgtgtgaatggcgtatgtcactgctacaaggagttc
attggtgaggactgcagtgagaagaggtgccccaatgactgcagtgggaatggatattgt
gacactggcgagtgttactgtgaggacggcttcattgggcttgactgctctaaagtgctt
gctccccagaatgcacgagtcctcaagaccacagaagattccgtggccattggctgggat
caggtggtggatgtggatggttatctcatcagctactttcctgttgggtatgaagcctct
gtgaagcaagtgcgagtgtccaaagatcaaaccacctatgagattctgggtcttcttcct
ggcacaaagtatattattactctccgcaatgtaaagaaggggattgccagtgacccagaa
ctcctgcaagccagcacagaggtctctgccattggtgctatatgggtgacagaagagaca
gataattctctggaagtggagtgggagaatccttcaacagaggtggattattacaagctg
aggatcagctctttgctccggccaggggaggagaaggaggtgctggtccctaaaagcagt
gatgccaagagcagatatgtcatcacaggcctgaagccaggaacccagtatgtgatcacc
gtcatatctatgaaggatgagatggaagggaagccgtcctctgtgaacggctggacagat
attgatggcccaactgatctggtaaccgaccaagtaacagaagacacagctaccatttct
tggaatggggcccaggctccaatagatagatatgtggtgagctacacctcagctgatggt
gacaccaaagagatctttgtggggaaggacaagaaaaccactaccctggtgggtttacat
ccaggcatggagtataccatctatatctgggctgtgaagggaacccaacagagcaggaag
gcaagcataacagctgaaacagagatagatggccctacaaacctgaaaacagaccaagca
acagagaacacagccactatctcttggaacaaggcattggctcctatagaccgatacata
cttagctacacctctgctgatggagacaccagagagatcacagttgggaaggataagacc
agcaccaccttgactggactgaagccaggcatggagtatgtcatctacatctgggctatg
aaggggagccagcagagcaagaggacaatcacaaagacactgacagaaattgaccctccc
aggaatgtccgtgtgtcagatgtaacacagtccagtggactggtcacttggacaccacct
gatgctcagatcagtggctatcttatcacctatcgggaaccagatggtactatcaaggaa
gtgcggttaggtcctaatgaggaaaggtttgtcctagaaggccttactcgaggaaccaaa
tacaccatacatatcatggcctttaagggagaccgctggagtcgaaaaacaaccaccacc
ttttctacagtcagtttgcgctatcccttccctgcggactgcagccagacccaggaaaac
ggacactctgccagcggcatgtacaccatctacctgaacggtgacgtcaacagacccctg
caggtgtactgtgacatggccactgatggaggcggatggatagtctttcagagacggaac
acagggcagctggatttctttaagcgctggaggaattacgttgaaggctttggagaccct
gctggggaattttggcttggccttgaaaagctgcatcagctcaccagtagcgcccccgtt
ccctatgaactgagggtggatttacgaacgcacaatgagtctgcctatgccgtctacgac
ctcttccaggtgggctccagcagggagcgatacaagctctccgtggggaattacagaggc
accgctggggatgccatgacttaccacaatggttggagatttaccacctgggacagggac
agcgacatcgctctcagcaactgcgcaatcacacatcacggtggctggtggtataagaac
tgccacttggccaatctgaatggcaaatatggcgaagacaagcacagtgagggaattaac
tgggagccatggaaaggccacttgttctccatcccttacaccgagatgaagttccgtcca
cgctcacacccaatcttgggtagaaaaaggagatctctagcagggaaggaacccagggtt
taa
DBGET
integrated database retrieval system