Podarcis muralis (common wall lizard): 114599146
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Entry
114599146 CDS
T06059
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like isoform X1
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmua04121
]
114599146
Enzymes [BR:
pmua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114599146
Ubiquitin system [BR:
pmua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
114599146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
DUF848
Motif
Other DBs
NCBI-GeneID:
114599146
NCBI-ProteinID:
XP_028589635
LinkDB
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Position
6:48438095..48443769
Genome browser
AA seq
736 aa
AA seq
DB search
MEPLNSNRKPERRRLCYQDERGRAPSGNDAARRKSLAPGRGTARLEEDRPDKIMATQSST
SLQDLIREDFLTCKICYDLYVVPKILPCLHTYCQKCLEPLVENGTIHCPECRLQSEAPGG
SVGLKTNFFINSLLELFQMKRNKDLECTVCSSAQKVVAATARCLDCKDFLCQICSQGHCC
SRLTLHHKVVNLEEFLAGHYDTEVRFLQELWCQDHPQEALRFFCDTCSMSICRDCRMLDH
FQHKVVSMSSAVQRKRPSVEQLIKSLQGTITCISEQEKAVEEAMDKLKVESERVKEKICK
YVEDITTYIFAQKDCVLAKLNAFLTEQLERFCLAQKELQSQKDKAMNTQEFSQRILCVGK
DSEILHLEGMIRTRVEELQAHRLPQLQSQIPELTIAWDEPQQLSEGSIFSLVFPGEQPTR
NAQQLELGSESLTSLGEESGEVMGTPSDSDEDSLTSESDSHFKSPFSSTGWSRRAGYAFS
FALDPSLTKQKPNITGIAVVPHSGQVVLLDQANAEIKQYSAFGHFEGVIPLPASNSVFCG
ISVCGKILACSSETHLFFLNLDGLFLRKLQLRGSESSYPLASYGDSYVAVSEGTLCSISL
YSPSGACVGRVQPDNYHGGKFLFIAVNSWEEFVVSDFIKKQIVVMEKSGVVLNVLNPSTS
LLAKPFSICVDEDRNIFVIDQFKVIQFSPYDNTGKVVFSGQGQMGRPRVLAIDGNNLILV
REDGNTHVFYLYGRLL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcttaactcaaacaggaaaccggagaggaggcggctctgctaccaagatgag
cgaggcagagcgccttccggaaatgacgccgcgaggcggaaatcgctcgcgcccggtcga
gggactgcccgcttagaggaagaccgaccagacaagatcatggcaactcagagttccacg
tcactgcaggatttgattcgggaagattttttgacttgcaaaatctgctatgacctgtat
gtggtgcccaaaatcttgccatgcctgcatacctactgccaaaaatgcctagagcccttg
gtagaaaatgggaccatacattgtcctgagtgccgtctgcagtcggaagctcctggaggt
tctgtggggctgaagaccaatttcttcattaatagcctcttggaactgttccagatgaag
cgcaacaaggacctagagtgcacagtctgctctagtgctcagaaagttgtggctgccact
gcccgttgcctggattgcaaggatttcttgtgccaaatatgttcccagggccactgctgc
tcccgcctcactctgcaccataaggtggtgaacctggaagagttccttgcagggcattat
gacactgaggtaagatttttacaggaactgtggtgccaagatcacccacaggaggcgctc
cgtttcttctgtgatacctgcagcatgtccatctgcagggattgtcgcatgctggaccat
ttccagcacaaagtggtatccatgtccagtgcagtccagcggaaacgcccttctgtagag
cagttgatcaagagcttgcagggaacaattacctgcatctctgaacaagagaaagctgtg
gaggaggcaatggacaaactaaaagtagagagcgaacgtgtcaaggagaagatctgcaag
tatgtggaagatatcactacttacatctttgcccagaaggactgtgttttggcaaaactg
aatgccttcctaacagagcagctggagcgtttttgtttagcacagaaggagctgcagagt
cagaaggacaaagcaatgaacactcaagagttttctcagcgtattctatgtgttgggaag
gactctgagatccttcacctggaaggaatgatcaggactagagttgaggagcttcaggcg
cacagactcccacaactccaaagtcagattccagaattaaccattgcctgggatgaaccc
cagcaactctctgaaggatcaattttcagccttgtctttcctggggagcaacccacaaga
aatgcgcagcagttggagctcggcagtgagtcattgacgtctctgggcgaggagagtggg
gaggttatgggcactccttctgattcagatgaagactccctcacaagtgaatctgactcc
cactttaaaagccctttttcctccactggctggagcagaagagcagggtatgctttcagc
tttgcgctagatccatccctcaccaaacaaaagcctaatatcactgggattgctgttgtg
cctcacagtggtcaagtcgtccttttggatcaggcaaatgctgagataaagcaatatagc
gcctttggccactttgagggggtgattcctttgcctgcatctaattctgtcttctgtggc
atctctgtgtgtggaaagatcctggcctgttcctcagagactcatctttttttcctgaat
cttgatggattattcctgcgtaaactgcagctgaggggctctgaatcgtcctatcccctt
gcctcatatggagactcttatgtggctgttagtgaaggaactctctgttccatctcattg
tatagcccatctggggcatgtgttggtagagtccagccagacaactatcatggggggaaa
ttcctgttcattgctgtaaatagctgggaggagtttgtcgtctcagacttcattaagaaa
caaattgtggtcatggagaagtctggggttgttctgaatgtgcttaacccctcaacttca
ctgctggccaagccattcagcatctgtgttgatgaagacaggaacatttttgtgattgat
cagttcaaagtgatacagttctcgccatatgataatactgggaaggttgtgttcagtggc
cagggtcagatgggaagacccagagtcctggccattgatggtaataacctcattttagtg
agggaagatggaaacactcatgtcttttacctatacggtaggttgctatag
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