KEGG   Podarcis muralis (common wall lizard): 114599455
Entry
114599455         CDS       T06059                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pmua  Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmua01009]
    114599455 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmua03036]
    114599455 (KDM5B)
Enzymes [BR:pmua01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     114599455 (KDM5B)
Protein phosphatases and associated proteins [BR:pmua01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     114599455 (KDM5B)
Chromosome and associated proteins [BR:pmua03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114599455 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_2 PHDvar_NSD
Other DBs
NCBI-GeneID: 114599455
NCBI-ProteinID: XP_028590557
LinkDB
Position
6:66392580..66442405
AA seq 1551 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDLVCKDRKWTKIATKMGFAPGKAVGSHIRAHYERILYPYNLFQTGASLLAPDICSKLMC
LVDDAVLEKCLQKPDITSGTKDKEYKPHDIPQRQSVQLSETCPPARRAKRMRAEATNIKT
DLEEATATETKTHNLRRRMGTTPPKLEPESDKESQALVKRETVEKKQPIWETEREKPKGR
SKKSFNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQ
CCILITQECNKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWR
LVSTIEEDVTVEYGADIASKEFGSGFPVRGGKIKLKPEEEEYLDSGWNLNNMPVMEQSVL
AHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLED
VMKKLAPELFESQPDLLHQLVTIMNPNTLMSHGVPIYRTNQCAGEFVITFPRAYHSGFNQ
GFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYCVFSHDEMICRMAAKAETLDVVVASTVE
KDMAIMIEDEKALREAVCKLGVTDLERVNLEILPDDERQCIKCKTTCYMSAVYCSCNPDL
LACLYHVEDLCTCPAYKYKMGYRYTLDELYPMMNALKLRAESYNEWASNVNEALEAKVNN
KKSLMNFKALIEESEMRKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGK
SQNQLTVNELRLFVRQLYALPCVISQTTLLKDLLNRVEDFQKYSQKLLSEEIPSASEIQE
LLDVSFDFDVDLPQLSELRIRLEQAHWLEDVQHVCLDQNSLTLDDMRRLIDSGVGLAPHP
AVEKAMAKLQELLTVSEHWDDKARTLIKARPRQSLSSLEAAVKEIEEIPAYLPNGIALKE
AVKKARDWLQEVEGLQVGGRVPVLDTLVELVSRSRSIPVHLEYLPRLESLVAEVQTWKEC
ASNTFLTDNSPYSLLEVLCPRCDIGTLGFKRKMKKLKEPVPNGKKKSTKLESLNDLERAL
SESKETAAAMATLGEARLKEMEALHSLRAANEKKIFSTEQDVEIKVCLCQSEPAAPMIQC
ELCRAVFHTSCVSVPRTLQEPRVWLCPHCHRSEKPPLEKILPLLASLQRIRVRLPEGDAL
RYMIERTVNWQHRAQQMLSSGNIKLIQDKVGSGILYSRWQTMAGQLQETSKVSQTIGATS
FSLPHDWNNRPMHLHSPFSTGQNCIPLHAISAELNELMMEAQLLQVSLPEIQELYEILFT
KQSPVAKTEQRSPVGPTSEKTDFCRGKRDGICSVERKLKRHFERGDFCSEMRTRVRKIAP
NKKKLKLSHLRELGTSKLERNRLFDIQRSGESQLLLSDMSFSEQEESEDEDAICPAVNCL
QPEGDEVDWVQCDGCCNQWFHQVCVGVSPEMAEKEDYICVSCTGKNSPYRK
NT seq 4656 nt   +upstreamnt  +downstreamnt
atggccgagttcctgccgccgcccgagtgcccggtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcctatagccgagcagaccgggatctgc
aaggtgcggccgccgccggattggcagcctccatttgcatgtgatgttgataaacttcac
tttactccacggatccaaaggctgaatgagttggaggctcagacccgcgtaaaactgaat
tttctggaccagattgcaaagttttgggaacttcagggatgcacactgaaaattccacat
gtagaaagaaagatcttggatttattccagcttaataggctagttgcagaagaaggtgga
tttgacttggtgtgtaaggacagaaaatggactaaaatagctaccaagatggggtttgct
cctggaaaagctgtgggctcacatattcgtgctcattacgagcgcattctttacccttac
aatttatttcaaactggagctagtctgctggcgccagacatttgttccaaactgatgtgt
ttagtggatgatgcagttctggaaaagtgtcttcagaagccagatattaccagtggcaca
aaggacaaggaatataaaccacatgatattcctcaaagacagtctgttcagctgtctgaa
acttgtccacctgctcgtcgagcaaaacgcatgagagcagaggctactaatattaaaact
gatttggaggaagctacagctacagaaaccaaaactcacaatttgagacgtagaatggga
accacacctccaaagcttgagcctgaaagtgataaagagtctcaagcccttgtgaaacgg
gaaacggttgaaaaaaagcaacccatctgggaaacagaaagagaaaaaccaaagggacgt
tctaagaaaagctttaatgcagtggatttgtatgtttgtctcttgtgcggcagtggtaat
gatgaggatcgtctgctcctatgtgatggctgtgatgacagttaccataccttttgctta
ataccacctcttcatgatgttcccaagggggactggagatgcccccaatgcctagctcag
tgctgtattttaattacacaggagtgtaataaaccacaagaagcatttggttttgaacag
gcagcacgagactacacacttcgcacatttggagaaatggcagatgccttcaagtcagat
tatttcaatatgccagtgcatatggttcctacagaattggttgagaaagagttttggcgt
cttgttagcacaattgaagaagatgttacagtggaatatggtgctgatattgcttcaaag
gagtttggcagtgggtttcctgtgagaggtgggaaaatcaaattaaaaccagaagaagag
gagtatcttgatagtggatggaatttgaacaatatgcctgtgatggaacagtctgtactg
gctcacatcactgcagatatatgtggaatgaaattgccttggctatatgtagggatgtgc
ttttcttcattttgctggcatattgaggatcactggagctattccatcaactatctgcac
tggggggagcctaaaacatggtatggagccccaggatatgcagctgagcaactggaagat
gtaatgaagaagttggctcctgagctatttgaatctcagccagaccttttacaccagctg
gttacaattatgaatcccaatacattaatgtctcatggtgtgcctatttaccgtaccaac
cagtgtgctggtgaatttgtgattacgtttccaagagcctatcatagtggctttaatcaa
ggtttcaactttgctgaagctgttaatttttgcactgttgactggttgccattgggacgt
caatgtgtggagcactatcgcttattaaaccgctattgtgtgttttctcatgatgaaatg
atatgcagaatggctgccaaagcagagactcttgatgtagtagtagcatctactgttgag
aaagacatggctattatgattgaagatgaaaaggctttacgggaggctgtgtgtaaactg
ggggttactgatttagagagagtgaatttggaaatattgcccgatgatgaacgacagtgc
ataaagtgtaaaaccacttgttacatgtctgcagtctactgttcttgtaatcctgactta
ttggcatgcctgtatcatgtagaggacctctgcacatgtcccgcttataaatacaaaatg
ggatatcgttacacattagatgaactctatccaatgatgaatgcacttaagctgcgggct
gaatcctacaatgaatgggcttctaatgtaaatgaagctttggaggcaaaagttaataat
aaaaaaagtctcatgaatttcaaagctttaattgaagaatctgaaatgaggaagtttcca
gacaatgatttgcttcgacaccttcgtttagttactcaggatgcagagaaatgtgcctca
gttgcacaacagcttcttaatggcaaacggcaaactaggtatcggtctggaggaggaaaa
tctcaaaatcagctgactgtgaatgaactccgtttatttgttaggcagctctatgcttta
ccatgtgtcatcagccaaacaacattgctgaaggatcttcttaatcgcgtggaagacttt
cagaagtatagccaaaaactcctctctgaagaaattcccagtgcttcagaaatacaggaa
ctgttggatgtcagttttgactttgatgttgatcttccccagctaagtgaattacggata
cgcctagagcaagcccactggctggaagatgtgcagcatgtttgcttggaccaaaattct
cttactctggatgatatgagaagacttatagactctggtgttgggctcgctcctcatcct
gctgttgagaaggcaatggctaagctgcaagagctgttgacagtatctgaacactgggat
gacaaggctagaaccctgataaaagccagaccacggcagtcattaagtagtcttgaagca
gcagtgaaggagattgaggaaattcctgcttaccttccaaatggcatagctctgaaagag
gctgtaaaaaaggccagagactggctacaggaagtggagggcttgcaggttggtggacgt
gtgcctgtgttagatacacttgtggaacttgtgtctagaagtcgctctattccagtacat
cttgaatatctgccaagattagaatcattagttgctgaggttcaaacttggaaagagtgt
gcaagcaatacttttttgactgataattcaccgtattctcttcttgaggtgttgtgtcca
agatgtgatattggaacattgggatttaaaagaaaaatgaagaaattaaaagagcctgtc
ccaaatggaaaaaagaagagcaccaaattagagagtttaaatgatttggaaagagcttta
tctgagagtaaggaaactgctgctgcgatggccacacttggtgaagcccgcttaaaggag
atggaagcactgcattcacttagagcagcaaatgaaaaaaaaatattctccactgaacag
gatgtagagatcaaagtttgtctctgccagagtgagcccgcagcaccaatgatacagtgt
gaactatgcagagcggtcttccataccagctgtgtttcagtgcccagaactttgcaggaa
cctcgggtgtggctctgccctcactgtcatagatctgaaaagccacctttagaaaagatt
ctacctttactggcttccttgcagcgtattcgagtgagactgcctgagggagatgcttta
cggtatatgatagagagaaccgtgaactggcaacatagagcacagcagatgttgtcctca
gggaatataaaacttatacaagacaaagtgggctcaggtatactgtacagcagatggcaa
accatggcaggccagttgcaagagacaagtaaggtttcacagacaattggtgctacatct
ttctctttgccacatgactggaataacagacccatgcatttacactctcctttctctaca
ggacaaaactgcatcccccttcatgccattagtgcagagctgaatgaactgatgatggaa
gcccaactactacaggtttcactacctgaaatacaagagctgtatgagatcttattcaca
aagcaaagcccagttgcaaagacagaacagaggtcaccagtaggaccaacaagtgaaaag
actgatttttgtcgagggaagagagatggaatttgctctgtggaaaggaagctgaagaga
cattttgagagaggagatttctgcagtgagatgagaacacgagtcagaaaaatagctccc
aacaagaaaaaactgaaattatctcatttgagggagctgggtactagcaagctggaaaga
aacaggttgtttgacatacagcggtctggtgaaagccagttgcttctttcggacatgtcc
ttctctgaacaagaagaatctgaagatgaggatgccatctgcccagctgtcaattgcctg
cagcctgaaggtgatgaggtggactgggtccagtgtgatggctgctgcaatcagtggttc
catcaagtatgtgtgggtgtctccccagaaatggcagaaaaagaagactacatatgtgtg
agctgtacgggaaagaactccccatatcgaaagtaa

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