KEGG   Podarcis muralis (common wall lizard): 114599670
Entry
114599670         CDS       T06059                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    114599670 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114599670 (RAE1)
   03036 Chromosome and associated proteins [BR:pmua03036]
    114599670 (RAE1)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     114599670 (RAE1)
Chromosome and associated proteins [BR:pmua03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    114599670 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd EIF3I WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C WD40_RFWD3 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_IFT140_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_ACSF4 NBCH_WD40 Beta-prop_Nup120_160 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th ExoI_SH3 Beta-prop_SPT8 B-prop_COPA_B_2nd PepSY
Other DBs
NCBI-GeneID: 114599670
NCBI-ProteinID: XP_028591109
LinkDB
Position
6:83679011..83690543
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACSFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacatcagggtttggaactggaggtaccagcatgtttggcagc
acagctacagataatcacaaccctatgaaggatattgaagttacttcaccacctgatgac
agcataggctgtttagctttcagcccaccaacattgccggggaatttcctcattgcagga
tcatgggcaaatgatgttcgttgttgggaagtccaggataatgggcagacaattccaaaa
gcacagcagatgcacacaggacctgtgctagacgtttgctggagtgacgatgggagtaaa
gtgtttacagcatcttgtgataaaactgccaaaatgtgggatctcaacagcaaccaggca
atacaaattgcacagcatgaagctcctgtaaagactgtccattggattaaagcaccaaat
tatagctgtgtgatgactggaagctgggataaaactctgaagttctgggacacccgatca
cccacgccaatgatgaccctgcagttgcctgagcggtgctactgtgctgatgtagtatac
cccatggctgttgtagctacggcagagagaggcttaatagtttatcagttagagaatcag
ccttctgaatttagaagaatagactctccacttaagcatcagcatcgctgtgttgctatc
tttaaagacaaagtgaacaagccaacagggtttgcccttggaagcatcgaaggaagagta
gccattcattacattaacccaccaaatcctgccaaagacaacttcaccttcaaatgtcat
cgttccaatggcacaaacacatctgcacctcaggatatctatgctgttaatgggatcgcc
tttcaccctgcccacggcacccttgcaaccgtaggatctgatggcagattcagcttttgg
gataaagatgcacggacgaagctaaaaacctcagaacagctggaccagccaatatctgct
tgctccttcaaccacaacggcaatatatttgcatatgcgtctagttacgattggtcaaag
gggcatgaattctataatccgcaaaagaagaactatatatttctgcgcaatgctgctgaa
gagttaaaacccagaaataagaagtag

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