Podarcis muralis (common wall lizard): 114600162
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Entry
114600162 CDS
T06059
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmua03009
]
114600162 (IGHMBP2)
03012 Translation factors [BR:
pmua03012
]
114600162 (IGHMBP2)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
114600162 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
114600162 (IGHMBP2)
Ribosome biogenesis [BR:
pmua03009
]
Eukaryotic type
Other ribosome biogenesis factors
114600162 (IGHMBP2)
Translation factors [BR:
pmua03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114600162 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
ResIII
nSTAND3
Helicase_RecD
UvrD-helicase
DEAD
AAA_16
AAA_22
SLFN-g3_helicase
AAA
Flavi_DEAD
IstB_IS21
Zot
AAA_25
DnaB_C
PhoH
UvrD_C_2
NTPase_1
AAA_33
Motif
Other DBs
NCBI-GeneID:
114600162
NCBI-ProteinID:
XP_028591826
UniProt:
A0A670HNA0
LinkDB
All DBs
Position
1:80636152..80699431
Genome browser
AA seq
1009 aa
AA seq
DB search
MATAAVQDFVSRQLEMLKEEREAEISEARAWKESFSLKELQRKGVCLLKLEVASQRTGLY
GRLLVTLQPRKHSSETELPCNNFGPGDIVGLYETAGQGDQLSTGLVTRIAPKSITIAIDE
PQSNLVSLDQGNSYRLLKLTNDVTYKRLKRALNTLSQYRSGPASGLIGVLFGSSKPSDAN
NIKLLKYYNESLDASQKEAVCFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLC
CAPSNIAVDNLVERLAGCKERILRLGHPARLLESIQCHSLDAVLAHGDNAQIVADIRKDI
DQAFVKSRKAQDKGERSHFLNEIKTLRKELKEREEAAMTEILTKANVILATNTGASSDGP
LKLLPENHFDLVVIDECAQAFEASCWIPLLKAKKCVLAGDHKQLPPTIISHKAATEGLSL
SLMERLIQKYDDHVVKMLTVQYRMHQTIMQWASTEMYGGRLSAHCSVAQHLLRDLPGVAS
TEETCIPLLLIDTAGCGLFELELEDEQSKGNEGEARLASLHVQALVEAGVKARDIAVIAP
YNLQVDMLRELLCHKYPDLEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRLNVA
ITRARRHVAVICDSQTIGNHIFLKRLVDYMNQHGEVRTAFEYLDDIVPDNYAAPKSSQGL
GDQEKRLKCNTPLAPKADGEKPRGKPAKRTGQRPIEASVQSPAWGATVDTVVKGNSCKHE
ARILEFLESSETQLDFPSSLNAHDRLIVHRLAEEHGLQHVSTGEGRERYISVRKRGTTTD
FSLGDAKACEQELSCRPAGTPKESRASEKELTCRPPSPSKDTHAYCEESGSHMSKKKVDL
KTLHMERMQREKAKREERAKQSREPNVNLQEITGNKHGSEAKGKASVKTKVEGSAEEDFD
ALISAAIKADNTCGFPKCKASVTTLGQLCLHCNKRYCLSHHIPEIHGCGEKAKAYARQRI
SKEASLCAGSGLKDKPLDPAKRAHLQRRLDKKLSELTSQRKSKKKDKEK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcggttcaggattttgtctctcggcagctggagatgctgaaggaggaa
agggaggccgaaatttcggaagccagggcatggaaggaaagtttctccctcaaagagctg
cagcgcaaaggtgtctgcttgctgaaacttgaagtagccagtcaaagaacggggttgtat
ggccgtctgcttgtaactttacaacctagaaagcatagctcagaaacggagctgccctgc
aataattttggtcctggtgacattgttggactttatgaaacagcaggccaaggtgatcag
ctctccacaggacttgtcacccgtatagctcccaaatcaatcacgattgcaattgatgag
cctcaaagtaaccttgtgagcttggaccaggggaactcctatcgtctgctgaaacttacc
aatgatgtcacatacaagaggcttaaaagggccttaaacacacttagtcaatatcgctct
gggcctgcatctggtcttatcggcgtcctcttcggttcttctaaacctagtgatgccaac
aatataaagctgttgaagtactacaatgaatcactggatgcctctcaaaaggaggctgtt
tgcttctcgctggcacagaaagagcttgccatcatccatggaccacctggaacaggcaaa
acgactacggtggtggagataatactccaagctgttcagcaaggcttgaaagtcttgtgc
tgtgctccatctaacattgcagttgacaacttggtagaaagactcgctggctgtaaagag
cggatcctgcgccttggtcacccggctcgtctcttggagtccatacagtgccattcactt
gatgcagtcttggcacatggggataatgcccagattgtagcagatatcaggaaagatatt
gatcaagcatttgtgaaaagcagaaaagcccaagacaaaggagaaaggagccattttcta
aatgagattaaaacactgagaaaagaactgaaagagcgagaggaagctgctatgactgaa
atactgacaaaagctaatgttattctggcgacaaacacaggagcctcttctgatggtcct
ctgaagctacttcctgagaaccactttgatctggtggtaattgatgaatgtgcccaggcg
tttgaagcaagctgctggatacctctgctgaaggccaagaagtgtgtcctggctggagat
cacaagcagctgcctcccacaatcatctctcacaaggctgccacagagggtctttctctc
agtttaatggaacggctgattcagaaatatgatgaccatgttgtgaagatgctcacggtg
cagtaccgaatgcaccagaccatcatgcagtgggcttccactgagatgtacggcggccgc
ctctcggctcactgctccgttgcgcaacatttactgagggacctgccaggggtggcttcc
acagaagaaacttgcattccattgttgcttattgatacagctggctgtggcttatttgag
cttgagctggaagatgaacagtctaaaggaaatgaaggcgaagcgcgtcttgccagcttg
cacgttcaggctttagtggaagccggtgttaaggcaagagacattgctgtcattgctcct
tacaacctccaggtggacatgctaagggagcttttgtgtcacaagtacccagacctggag
attaaatcggtggatggcttccaaggaagagagaaggaagctgttgtcctctcttttgta
aggtccaacagaaaaggtgaagtaggattccttgctgaagaccggagactaaatgttgca
attactcgtgcccgccgccatgtagctgtgatctgtgactctcagaccattggcaaccac
attttccttaaacgcctagtggactatatgaaccagcatggggaggtgcgcaccgctttt
gaatacctggatgacattgtgccagataactatgctgctcccaagagctctcagggtctg
ggtgaccaagaaaagagacttaagtgcaacactccacttgccccaaaggctgatggagag
aagccaagaggaaaaccagccaaacggaccgggcagaggcccatagaggcttctgtgcaa
agcccagcctggggggcaacagtggatactgtagtgaagggcaattcatgtaagcatgaa
gccaggatactggagtttctggagagtagcgagacccaactggatttcccttcatcatta
aatgctcatgacaggttgattgtccaccgtctggcagaggaacatgggctgcagcatgtg
agcacaggagaaggtagagagagatacatcagtgtccgtaagagaggcaccacgacagac
ttttctctgggagatgctaaggcctgtgaacaagagttgtcctgcagacctgcaggcacc
cccaaagaatcccgggcctctgaaaaagagttaacctgcagacccccaagcccctcgaaa
gacacccatgcctactgtgaggagagtggaagccatatgagcaagaagaaagtggatctg
aaaaccctgcacatggagcggatgcaaagggagaaggccaagagagaggagagggccaaa
caaagtcgtgagccaaatgtaaatcttcaggaaatcactggaaataaacatggaagtgaa
gcgaaagggaaggcttctgttaaaaccaaagtggaaggttcagcagaggaagattttgat
gctctgatttctgctgcaatcaaagctgacaacacatgtggtttccccaaatgcaaagca
agtgtgacaaccctggggcagctctgcctgcattgcaataaacgctactgtctcagccac
cacatcccagagattcatggctgtggggagaaagccaaagcatatgcccggcagagaatc
agcaaagaagcttctctatgtgctgggagtgggttaaaggacaagcccttggatcctgcc
aagagagctcatctccagaggcgcctggacaagaaactcagtgagctcacaagccaaaga
aagagcaaaaagaaagacaaagagaaatga
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