Podarcis muralis (common wall lizard): 114600517
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Entry
114600517 CDS
T06059
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmua04040
]
114600517 (TRPA1)
Ion channels [BR:
pmua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114600517 (TRPA1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
114600517
NCBI-ProteinID:
XP_028592541
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Position
7:34391652..34423204
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AA seq
1114 aa
AA seq
DB search
MRRAFLKLFQSGQSKQDTCYEGVVCEADAASVASQDVFKVISDGSTCRLRSFIKKNRDGL
KKLDELNATPLHHAAAGGQLELMQMIIDGSSTEVLNVTDCSGNTPLHWATKKSQIGSVKL
LLSKGANPNILNSSMMAPLHLAVQCLHNELVKIFVEHSATDVNLEGESGNTPILLACYKD
NTEALKLLIKNGAKICKANSLGCMPVHAAAFSGAKTCMEIIIKKGEELGYSPKNHINFTN
NGKCSPLHLAVQSGDLEMIKMCIEYGAQIDLKQSDKCTALHFAATQGATEILKLMMSSYA
GDEPIVDALDGNKETLLHRAALFDHYDLAEYLISMGAKIDSVDVEGRTPLLLATYCASWK
IVNLLLSKGANVELKDHLGRNFLHLTVLHPGGLKHLNEQFLKMKHIKDLVTDEDNEGCTP
LHYACRQGVPLSVNSLLELNVSICSKSRDKKSPLHFAASYGRINTCQRLLRDMVDTRLLN
EGDKKGMTPLHLAAQNGHEKVVQFLLKKGALFLCDYKGWTALHHAAFGGYTRTMQIILNT
NVKCTDKVDEEGNTALHLAAREGHAKAVRLLLDDSAKVLLNKNEASFLHEAIHNGRKDVV
NTVILHKRWEETVVTFSHHSSTNKCPLIEMVEYLPECLKLVLDNCITESSDDKASKDFCV
EYNFRYLQCPLKLTKKLKEDDDIVYEPLITLNAMVRHNRVELLSHPVCTEYLLMKWMAYG
FRAHLMNLAVYCLGLMPLTLLIIHIEPEGSSNRTVKAGPFENKSSYFTKVCMCLVFIMSL
FGICKEIIQLFQQKLKYLLDYSNLLDWTIYTTNIIFVSSLFIQLPVRLQWECGAIAIFLS
WMNFLLYLQRFENYGIYVVMFWEILRTLIRIIIVFFFLMLAFGLSFHVLLGSQETYGTPY
LSVMQTFAMMLGDINYREAFLEPMLSDHLPYPFLSFAMLVIFSLLIPILLMNLLIGLAVG
DIAEVQKFAALKRIAMQVSLHTNLEKKLPYWFLSRVDQDSITVYPNRPRYCGFMSVFQYC
FGCNDIAANTQNADTTLELEVLKQKYRLKDIAALMEKQHDLLKLVVQKMEIISEAEDEDT
NDLFQHKFRKKQLEHKNSKWDTVLKAVKCKPPEI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgccttcctgaagctgttccagtccgggcagagcaagcaggacacctgctac
gaaggtgtcgtgtgcgaagccgacgccgcctcggtcgcctcgcaggatgtgtttaaggtg
atctcagatggaagtacctgcagactacgaagcttcattaagaagaatcgggatggtctt
aagaaactggatgagctaaatgccactccattgcatcatgctgcagcaggaggtcaactt
gagctaatgcaaatgattatagatggttcttcaactgaagtgctaaatgtgactgactgc
tctggaaacacaccactgcattgggccacgaaaaaatcccagattggaagtgttaaatta
cttctcagcaaaggagctaacccaaacattcttaattccagtatgatggctccacttcac
ttggctgtgcagtgccttcacaatgaattagttaagattttcgtcgaacacagcgctaca
gatgtgaacctggaaggagagagtgggaacacacccatattacttgcatgttataaagat
aatactgaagcactgaaacttctgataaaaaatggtgctaaaatatgtaaagcaaacagt
ttaggatgtatgccagtccatgcagctgcattttctggtgcaaaaacatgtatggagatt
atcataaagaagggtgaagaattaggctattcccctaaaaatcacatcaattttactaat
aatggaaagtgtagtcctcttcatctggcagttcaaagtggagacttggaaatgattaaa
atgtgcattgaatatggagcccaaattgatttgaagcagagtgacaaatgcacagctctt
cattttgctgccacacaaggagctactgaaattcttaaactgatgatgtcatcttatgca
ggcgatgaacctattgttgatgcattagatggaaataaggaaacattgcttcacagggct
gcattgtttgatcactatgacttggcagaatatctgatatcaatgggagcaaagatcgat
agtgttgacgttgaaggtcgaactccactactacttgctacttattgtgcatcatggaaa
attgtgaatttattactatcaaaaggagcaaatgtagaattaaaagatcatcttggtcgt
aattttttgcatctaacagtactacatcctggaggattaaaacatctgaatgaacagttt
ttaaagatgaagcatattaaagatctcgtaacggatgaagataacgaagggtgcactcct
ctacattatgcatgcaggcagggggttcccctttcagtgaacagcctcctcgaactgaat
gtttccatctgttctaaaagccgagataagaaatctcctttgcattttgcagctagctat
gggcgtatcaacacctgtcaacgactcctccgtgatatggtagataccaggctcttgaac
gaaggagataagaaagggatgactcccctgcacttggctgctcagaatggtcatgagaag
gtagtgcagtttctcttgaagaaaggtgccctcttcctctgtgattataaaggctggaca
gctttgcaccatgctgcatttggagggtatactcgcacaatgcagataattttgaatact
aatgtgaagtgcacagataaagtggatgaagaagggaacactgccctccatcttgctgcc
agagaaggccatgccaaagccgttagactgcttcttgatgacagtgccaaagtactcttg
aacaaaaacgaggcttcttttcttcatgaagccatacacaatgggcggaaagatgtcgta
aacactgtcatcttacataaaagatgggaagagactgttgtaacattttctcaccattca
agtacaaataaatgtcctctaatagagatggttgaatatcttcctgaatgtttgaaatta
gttttagacaattgcatcactgaatcatcagacgacaaggcatccaaagacttctgtgtt
gaatataacttcagatatcttcagtgcccactgaagcttaccaagaaattaaaagaagat
gatgatattgtgtatgagccacttatcactcttaatgccatggtccgtcataatcgtgtt
gaactgctcagccatcctgtctgtacagaatatttactcatgaaatggatggcctatggg
tttcgagcacatctcatgaatctagctgtgtattgtcttggcttaatgcctctaacgctc
ctgatcatccacatagaaccagaggggtcttccaacagaactgttaaagcagggcctttt
gagaataagagttcatacttcacaaaagtgtgcatgtgtttagtttttatcatgagctta
tttgggatctgcaaagaaataatacaactcttccaacagaaacttaagtatctcttggat
tattcgaatctcctcgactggacaatatatactacaaacatcatttttgtatcatcttta
tttattcaacttccagttcgtttgcagtgggagtgtggtgcaattgctatattcttgtct
tggatgaatttcttgctatatctgcaaagatttgagaattatggaatatatgttgtgatg
ttttgggaaattttgaggacgttgatccggatcatcattgtcttcttcttcttgatgtta
gcctttgggctcagcttccatgttcttctcggttcacaggaaacatatggcactccatat
ctttctgtaatgcagacatttgccatgatgctaggagatatcaattatcgtgaagctttc
cttgaaccaatgctttccgatcatctgccatatccgttcctgagttttgcaatgcttgtt
atcttctctctccttattccaatccttcttatgaacttgttgattggcttggctgttggt
gacattgcagaggtacagaaatttgcagcactgaaaagaatagcaatgcaggtcagtctt
cacacaaatttggagaagaaactgccatactggtttctcagcagagttgaccaggattca
atcactgtgtatcctaataggccaagatattgtggatttatgagtgtgtttcaatattgc
tttggctgtaatgatatagcagcaaatacgcagaatgctgacacaactttggaactagaa
gtattgaaacagaagtacaggcttaaagatattgcagcacttatggagaaacagcatgac
ctccttaaactggttgttcaaaaaatggaaatcatatctgaggcggaggatgaagacaca
aacgatctattccagcacaaatttaggaagaagcaattggagcataaaaacagtaaatgg
gatacagtattaaaggcagtgaaatgcaaacctcccgagatctag
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