Podarcis muralis (common wall lizard): 114602380
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Entry
114602380 CDS
T06059
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03013
Nucleocytoplasmic transport
pmua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114602380
03015 mRNA surveillance pathway
114602380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114602380
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114602380
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
114602380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114602380
NCBI-ProteinID:
XP_028596376
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All DBs
Position
8:66691034..66716399
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AA seq
504 aa
AA seq
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MATDSWALAVDEQEAAAESMSNLHLKDEKSKPDSNALRAKGNPDTVAAARIVQSRTTQGT
GAVLKTDDNTEKIEEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPTSPLYSVKSFE
ELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSR
VEPEHRYPQCLCLSPTYELALQTGKVIEQMGRFYPELKLAYAVRGNKLERGQKIAEQIVI
GTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKDCQMLLFSA
TFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSREEKFHALCNIYGAITIAQ
AMIFCHTRKTAGWLAGELSKEGHQVALLSGEMMVEQRAAVIDRFREGKEKVLVTTNVCAR
GIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKHSLNILNRI
QEHFNKKIHKLDTDDLDEIEKIAN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggattcctgggctctggcggtggacgagcaggaagcggcggcggagtcgatg
agcaacttgcacctgaaggacgagaaatccaagccagattctaatgcactcagagcaaaa
ggcaaccccgacactgttgctgcagctagaatcgtacaaagcaggacaactcaaggcaca
ggagcagttctcaagacagatgacaatacagagaagattgaagaggaggaaaaagaggac
cgagccgcccagtcgttgctcaacaagctgatccgcagcaacctggtggacaacacgaac
caagtggaggttttgcagagggatcctacgtcgcctctctactccgtgaagtctttcgag
gagctgcggctgaagccacagctgctgcagggtgtctatgccatgggtttcaacagacca
tccaaaatccaagagaacgccttgcccatgatgctggcagaacctccacagaacctgatt
gcgcagtcacagtctggtaccggtaagacggcagcttttgtcttggcgatgcttagcaga
gtggagccggagcacagatacccccagtgtctctgcctctctccaacctatgagctggct
cttcagacagggaaggtgatcgagcagatgggcaggttttatccggagctgaagctggcc
tacgcggttcgaggcaacaaactggaacgtggccagaagattgctgaacagattgtcatt
ggcacacctggcaccgtcctggattggtgctccaagctgaaattcattgaccccaagaag
atcaaagtctttgtcttggatgaagccgatgtcatgatagccacccagggtcaccaggat
cagagcatccgcatccagaggatgcttcccaaagactgccagatgttgctcttctcagcc
acgtttgaagactctgtgtggaagtttgcccagaaagttgtccccgaccccaacatcatc
aagctgaagcgggaggaagagactttggacaccatcaagcagtattacgtcctgtgcaac
agccgtgaggagaaattccatgccctctgcaacatctatggcgccatcacaattgcgcaa
gccatgatcttctgccacactcgcaaaacagctggttggctagctggggagctctccaag
gagggtcaccaggtggctctcttgagtggcgagatgatggtggagcagcgtgccgcggtg
atcgatcgcttccgggagggcaaggagaaagtgttggtgactacgaatgtctgtgcccga
gggatcgacgtggagcaggtctccgtcgtcatcaactttgaccttccagtggataaagac
gggaatccggacaacgagacatatcttcaccgcattggccgcacaggacgttttggcaag
cggggcctggccatcaacatggtggacagcaagcacagtttgaacatcctcaacaggatc
caggaacatttcaacaagaaaattcacaaactggatacagacgatttggatgaaattgag
aaaatagcaaattga
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