Podarcis muralis (common wall lizard): 114603101
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Entry
114603101 CDS
T06059
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114603101 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114603101 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114603101 (SUPT5H)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114603101 (SUPT5H)
RNA polymerase I system
114603101 (SUPT5H)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
114603101 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
114603101
NCBI-ProteinID:
XP_028597679
UniProt:
A0A670JCD6
LinkDB
All DBs
Position
8:complement(2019370..2053731)
Genome browser
AA seq
1082 aa
AA seq
DB search
MSDSEDSNFSEDESERSSEAEEVEENEAEEERVSVVGSEKEEVEEEEEEEEEEYDEEEEE
DDDDRPAKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEFEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAQSSVRETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAIALMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRMGYWNQQMVPIKEMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NQISLKMIPRIDFDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVNRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTIG
GFQPMSPRINSPMHPSAGGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGMVK
DATESTARVELHSTCQTISVDRQRLTTFGSRKPGGMTSTYARTPMYGSQTPMYGSGSRTP
MYGSQTPSHDGNRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEFDYGFDDEPT
PSPQGYGGTPNPQTPGYPDPSSPQVNPPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPS
PSPQSFHQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGVPSPGAYNP
HTPGSGIEQSSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVTGGMCSVYLKDSEKVVSI
SSEHLEPVIPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLEEQLKILNLRFLGKLL
EA
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcgaggacagcaacttctctgaagatgagagcgagcgcagcagtgaggca
gaagaagtggaggagaacgaggctgaagaggagcgtgtcagtgtcgtaggcagcgagaag
gaagaagtggaggaagaggaagaagaggaggaggaagagtatgacgaagaggaggaagag
gacgatgatgaccggcctgcgaagaaacccagacatggcggatttattttagatgaagct
gatgtggatgatgagtatgaggacgaagaccagtgggaggatggtgcagaggacatcctg
gagaaagaggaatttgaagcgtccaacatcgacaatgtggttctggacgaggatcgctct
ggagcacggaggctgcaaaacttgtggagggaccaaagagaggaggagctgggcgagtat
tacatgaagaagtatgcccagtcttcggtgcgcgagacggtgtacggcggctccgacgag
ctttctgacgacatcacgcagcaacagctacttcctggagtcaaggatcccaacctctgg
actgtgaaatgcaagattggagaggagcgggccacagccattgcgctcatgaggaagttc
atcgcctaccagttcacagatacacccttgcagatcaaatcggtggtcgcccccgagcac
gtgaaagggtacatctacgtggaggcctacaagcagacgcacgtcaagcaggccatcgaa
ggggtgggcaacctccggatgggttactggaaccagcagatggtgcccatcaaggagatg
acggacgtgcttaaggtggtgaaggaggtgaccaacctgaagcccaagtcgtgggtgcgc
ctcaagaggggcatctacaaggacgacatcgctcaggtggattacgtggagcccagccag
aatcagatttccctgaagatgattccccgcatcgatttcgaccgcatcaaagcccgcatg
agcctgaaagactggtttgccaaacggaagaagttcaagcgcccgccgcagcgactcttt
gatgccgaaaagatccggtctttggggggcgacgtggcctccgatggggatttcctcatc
tttgaggggaaccgctacagcaggaagggcttcctcttcaagagctttgctatgtctgcc
gtgatcacagaaggagtgaagcccaccctgtctgagctggagaaatttgaagaccaaccg
gaaggcattgacttggaggtggtgacagaaagcacagggaaggagcgggagcacaacttc
cagcccggcgacaacgtggaggtgtgtgagggggagttgatcaacctgcaaggcaagatc
ctgagcgtggacgggaacaagatcaccatcatgccgaagcacgaagacctcaaggacatg
ctagaattcccggcccaggagttgcgcaaatacttcaaaatgggggaccacgtgaaggtg
attgccggccgctttgagggcgacacgggactgattgtccgtgtggaggagaacttcgta
atccttttctccgacctcacaatgcatgagctcaaagtcctcccccgagaccttcagctc
tgctcggagacagcctctggcgtggatgttggcggccagcacgagtggggggagctggtg
cagctggacccccagacagtgggggtcattgtccgcctggagcgggagaccttccaggtc
ctcaacatgtatggcaaagtggtgacagtcaggcaccaggctgtgaaccggaagaaggac
aaccgctttgccgtggcgctggactctgagcagaacaacatccacgtcaaagacatcgtg
aaagtcatcgacgggccccattcgggtcgcgagggcgagatccgccacctcttcagaagc
ttcgctttcctgcattgcaagaagctggtggaaaacgggggcatgtttgtgtgcaagacg
cgccatttggttctggccggaggctcaaagccccgggatgtcacaaacttcaccattggc
ggcttccagcccatgagtcctcgcatcaacagtcccatgcatcccagcgccggagggcag
cgcggcggctttggaggaggcgggatgagccgaggccgcgggcgcagagataacgacctc
attgggcagaccgtgcggatttcccaaggcccctacaaaggctacattggcatggtcaag
gatgccacggaatccaccgcccgcgtggagctacattctacctgccagaccatctctgtg
gaccgacagcgtctcacgaccttcggttcaaggaaaccaggtggcatgacctccacttat
gcacggacacccatgtacggttctcagacccccatgtatgggtcagggtcccgcacaccg
atgtatgggtcacagactccgtcgcatgatggaaaccggactcctcactacggctctcag
acccccttgcacgacggcagccggacccccgcgcagagtggggcttgggaccccaacaac
cccaacactccctccagggcggatgaagagttcgactatggttttgacgacgagcccacc
ccttctccacaaggctacggaggaacccccaacccacagactcctggctatcccgaccct
tcttccccgcaggttaacccgccgtacaaccctcagacgcctgggaccccagctatgtat
aacacagaccagttttctccctacgccgttccatccccacagggctcctaccagccgagt
ccaagcccgcagagtttccatcaagtggcgcctagcccagtcggctaccaaaacacccac
tctccggccagctaccacccaacaccgtctcccatggcttaccaggctagtcccagccct
agcccagtgggctacagccctatgactccaggggttccctctccaggagcttacaacccc
cacacaccaggttccgggatcgagcagagctccagcgactgggtcaccaccgacatccag
gtcaaagtacgtgacacctacttggacagccaggtcgtggggcagaccggagtcatccgc
agcgtgaccggtgggatgtgctcagtctaccttaaggacagcgagaaggtagtcagcatt
tcgagcgagcacctggagcctgtgataccaaccaagaacaataaggtcaaggtcatcctg
ggagaggaccgagaggccaccggtgtcctgttgagcattgacggggaggatggcatcgtc
cgcatggacttggaagaacagctcaagattctcaacctccgcttccttggcaagctgctg
gaggcctag
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integrated database retrieval system
