Podarcis muralis (common wall lizard): 114603906
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Entry
114603906 CDS
T06059
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114603906 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114603906 (SMARCA5)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114603906 (SMARCA5)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
114603906 (SMARCA5)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
114603906 (SMARCA5)
RSF complex
114603906 (SMARCA5)
WICH complex
114603906 (SMARCA5)
B-WICH complex
114603906 (SMARCA5)
NORC complex
114603906 (SMARCA5)
BRF complex
114603906 (SMARCA5)
NuRF complex (fruit fly)
114603906 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
RRG8
AAA_14
Motif
Other DBs
NCBI-GeneID:
114603906
NCBI-ProteinID:
XP_028599221
UniProt:
A0A670IIA4
LinkDB
All DBs
Position
9:complement(41906987..41930185)
Genome browser
AA seq
1036 aa
AA seq
DB search
MSAAGQENENAGSLPAGASVPVAENAGAGAAEGPPGGDAEGADVVDDESPGIQKENQEPD
PTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
VGDYRHRRTEQEEDEELLTESSKTTNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRA
VCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTNNCLGD
QKLVERLHMVLRPFLLRRIKAEVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNS
AGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKE
QDSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSKFVFML
STRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERI
VERAEMKLRLDSIVIQQGRLVDQNLNKLGKDEMLQMIRHGATHVFASKESEITDEDIDGI
LERGAKKTAEMNEKLSNMGESSLRNFTVDTESSVYNFEGEDYREKQKMAFTEWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIG
YKVPRNPDLPNASQAQKEEQIKIDEAEPLNEEELEEKEKLLTQGFTNWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSLVQKRK
LDGTPDGRGRKKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggcggggcaggagaacgagaacgccggctccctgcctgccggcgcttcggtt
cccgtcgcggagaacgcgggggcgggcgccgcggaggggccgcccggaggagacgccgaa
ggagcggatgtggttgatgacgaatctccaggaatacaaaaagagaaccaagaaccagat
cctacatatgaagagaaaatgcaaacagacagagcaaatagatttgagtatctgttgaag
caaacagaattgtttgctcatttcattcagcctgctgctcaaaagactccaacttcaccc
ttgaaaatgaaaccaggacggccacgaataaagaaggatgaaaaacaaaatctcctatca
gttggcgactatcgccatcgcagaactgaacaggaagaggatgaggagctgttaacagaa
agctcaaagaccactaatgtctgcacccgctttgaagactctccatcatatgtaaaatgg
ggaaaactgcgtgattatcaagtccgagggttgaattggctcatttctttgtatgaaaat
ggcatcaatggtatcttagcagatgaaatgggtctgggaaagacactgcaaacaatttct
ctccttgggtatatgaaacactacagaaatattcctggtcctcatatggtattagttccc
aaatcaactttacataattggatgagtgagtttaagagatgggtgccaactcttcgggca
gtatgtctgataggtgacaaagaccagcgagccgcatttgtgcgagatgtattgttgcct
ggtgaatgggatgtctgtgtaacatcatatgaaatgctcattaaagagaaatctgtgttc
aaaaaatttaactggagataccttgttattgatgaagctcacagaatcaaaaatgaaaaa
tcaaagttgtcagaaattgtgagagagttcaagactacaaatagactactgttaactgga
acaccattacagaacaacttgcatgaactttgggcacttcttaactttttactgccagac
gtctttaattcagctgatgattttgattcatggtttgatacaaacaactgtcttggggat
caaaaactagtggaacggctccatatggttctacgaccatttctcttgcgtcgtattaaa
gctgaagtagagaaaagtttgcctccaaaaaaggaagttaaaatatatgtaggtctcagc
aaaatgcagagagaatggtatacaagaatcttaatgaaggacattgatatattgaattct
gctggaaaactggacaaaatgagattactgaacattcttatgcagttgcgaaaatgttgt
aatcatccatacctgtttgatggagcagagcctggcccaccttacacaacagatatgcat
ttggttactaacagtggcaaaatggttgtcttggacaaactgttgccaaaattgaaagaa
caagattcacgcgtcctaatcttcagtcagatgaccagagtcctagatatcttagaagat
tattgcatgtggcgaaactatgaatattgtaggcttgatgggcagacgcctcatgatgag
agacaagcctccattaatgcgtacaatgaacctggaagctcaaagtttgtgttcatgctg
agcacacgagctggtggtttgggaatcaatctggctacagctgatgttgtaatcatttat
gattcagactggaatcctcaagtagatctacaagctatggatcgagcacatagaattggt
caaacaaagactgttagagtattcaggtttattacagacaacactgtagaagaaagaata
gttgaaagagcagaaatgaaacttcgcttggattccatagttattcaacaaggaagacta
gtggatcaaaatctgaacaaactggggaaagatgagatgttgcagatgattaggcatgga
gctacccatgtctttgcttccaaggagagtgaaattaccgatgaagatattgatggaatt
ttggaaagaggggcaaagaaaactgcagaaatgaatgagaaactctccaacatgggtgaa
agctcactcagaaattttacggtggatacagagtcaagtgtctataactttgaaggagaa
gattatagagagaagcaaaagatggcattcacagagtggattgaaccacctaagcgtgag
agaaaagcaaactatgctgttgatgcttatttcagggaagctcttcgtgtcagtgaacca
aaagcaccaaaagcgccacgccctccaaaacagcctaatgttcaggatttccagttcttt
ccaccacgtttgtttgaactgttggaaaaagagattctttattacagaaaaaccattggg
tacaaggtacctcgtaatcctgacttacccaatgcatcccaggcacaaaaggaagagcaa
attaaaattgatgaagctgagccccttaatgaagaagagttggaagaaaaagaaaagtta
ctaacccaggggttcacaaattggaataagagagacttcaatcagttcatcaaagctaat
gaaaaatggggtcgcgatgacattgaaaatatagcccgggaagtagaaggaaaaactcca
gaggaagtcattgaatattctgctgttttctgggaacgatgtaatgaactccaggatata
gaaaagataatggcacagattgaaagaggtgaagctcgaattcaaaggcggatcagtatt
aaaaaggcacttgacacaaagattggcaggtacaaagcaccttttcaccagctgaggata
tcgtatggcactaacaaaggaaaaaattatacggaagaggaagatcgctttttaatctgc
atgcttcacaagctaggatttgacaaagaaaatgtttatgatgagttgaggcaatgtatt
cgcaactctccccaattcagatttgattggttcctcaagtctagaactgcaatggagctg
caaagacgatgcaacaccttgatcactttgattgaaagagaaaacatggaattagaagaa
aaagagaaggcagaaaagaaaaaacggggcccaaagccatctttggtgcagaaacgtaag
ctggacggtactcctgatggtagagggaggaaaaagaagttaaagctgtga
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