Podarcis muralis (common wall lizard): 114604305
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Entry
114604305 CDS
T06059
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04140
Autophagy - animal
pmua04148
Efferocytosis
pmua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114604305 (VPS16)
04148 Efferocytosis
114604305 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114604305 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114604305 (VPS16)
Membrane trafficking [BR:
pmua04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114604305 (VPS16)
Hops complex
114604305 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
DUF3939
Motif
Other DBs
NCBI-GeneID:
114604305
NCBI-ProteinID:
XP_028600164
UniProt:
A0A670IVS1
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All DBs
Position
9:complement(74862450..74904281)
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AA seq
837 aa
AA seq
DB search
MDCYTANWDPLGEAAYYRKLDLYTMGWNLREDLRDCLVAAAPYGGPIALLKNKKEKSPSS
RPPLEIYTASGVLLASIPWKNCPAVHLGWTTSEDLLCIQEDGSVLVYSLFCEFKRRFSMG
NEVLQNHVLEAKVFHTEYGTGVAILTGVHRFTIATNVEDLKLRRLPQVPGVQKPPSCWAV
LCQERVTVLLVAVGQELYLLDNTTCSPVTLPGLSPHAGSFLRMAVSFNYRFLALFTDTGY
IWMGKSNLKEKLGESMCEFRAPPKQMVWCTRSRSKQRAVVMAWERRLLVAGDAEQCIQYP
LDEDSYLVPELDGVRIFSRSTHEFLHEIPEASQEVFKIASMAPGALLLEAQKEYEKESQK
ADEYLREIKDQNLLPEAVEQCIRAASYEHEPEIQKSLLRAASFGKCFIDKFPPERFVETC
RDLRVLNAIRDYQIGIPLSFDQYTQVTTEVLLDRLVLRRLYPIAIKICEYLRLSEFQGIS
RILAHWACYKVQQKDKSDEEVAQAINQKLGDTPGISYSEIAARAYECGRTELAIKLLEYE
PRSGKQVPLLLKMKRSQLALSKAIESGDTDLVYTVVLHLKNELNRGAFFMTLQNQPVALS
LYRQFCKYQELDTLKDLYNQDDDHQELGNFHVRASYASDKQIDGRVASLQNAVDEYYKAK
NEFAAKATEDQIKLLRSQRRLQADFDKPYLDESLHDTVYNLILEGNHKRAEQFYRDFKIP
DKRFWWLKINALAEQGDWEELEKFSKSKKSPIGYLPFVEISMKHHNRHEAKKYAPRVAPE
QRVKAFLLVGDLSQASDAAIERKNEAEMNLILSKCTAAADASVVAKINLAKAQLGKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgctacacggcaaactgggaccccctcggggaagcggcctattaccggaagctg
gatttgtacaccatgggctggaacctgagagaagacctacgggattgcttggtcgctgct
gcgccctacggaggccccattgctttgctgaaaaacaagaaagagaaatctcccagttcc
cggccacctctggaaatctacacagcctcaggggtcctcttagctagcattccgtggaag
aactgtccggccgtgcaccttggctggacgaccagtgaggacctcctttgcatccaggag
gatggctcagtccttgtctacagcctcttttgtgagttcaagcggcgcttcagcatgggc
aacgaggtgcttcagaatcacgtgctggaggccaaggtgttccacacggaatacggcacg
ggagtggccatcctgactggggtccaccgcttcaccatagccaccaacgtcgaggacttg
aaactccgcaggctgcctcaggtgccaggtgtccagaagcccccctcctgctgggccgtc
ctgtgccaagagcgagtgaccgtcctccttgttgctgttggccaagagctgtacctactg
gacaacacgacctgctccccggtgaccctgcctgggctcagtcctcacgccggctccttt
ctgcggatggcagtatccttcaactatcgcttcctggctctcttcaccgacacaggatac
atctggatggggaagtcaaaccttaaggaaaaactgggcgagtccatgtgcgaatttcga
gctccgccaaagcagatggtctggtgcacccgctctcgaagcaagcagcgcgccgtggtg
atggcgtgggaacggcgcctcctcgtggctggggacgcagagcagtgtattcagtaccct
ctggatgaggattcgtacctcgtgccggagctcgatggcgtgaggatcttctcccgttcc
acccacgaattcctccacgagatcccagaggccagccaggaagtcttcaagattgcatcc
atggcaccaggagcactgctgctggaagctcagaaggagtatgagaaagagagccagaag
gccgacgaatacctgcgggagatcaaggaccagaatctgctcccggaggccgtggagcaa
tgcatcagggcggccagctacgaacacgagcccgagatccagaaatctctccttcgggcg
gcctcctttgggaaatgcttcattgacaagttcccgcccgagcgcttcgtggagacctgc
agggatctgcgggtgctcaatgccatccgggattaccagatcgggatccccctcagcttc
gaccaatacacacaggtcaccacggaagttttgctggacaggctggttctgcggagactt
taccccatcgctatcaaaatctgcgagtacctgcgtctctccgagttccaggggatcagt
cgcatcttggcgcactgggcctgctacaaggtacagcagaaagacaaatctgatgaggaa
gtagctcaggccatcaaccagaaactgggcgataccccgggcatctcgtactcagagatc
gctgcccgggcgtacgaatgcggccggacagagctggccattaagctgctggagtacgag
ccccggtctgggaagcaggttcctctgctgctgaagatgaagaggagccagttggcgctt
agcaaggccatcgagagcggagacaccgacttggtttacacggtcgtcttgcacctgaag
aacgagctgaaccgcggcgccttcttcatgactctgcagaaccagccggtggctttgagc
ctctatcgccagttctgcaaataccaagagctggatacactcaaagacctctacaaccaa
gacgatgaccaccaggagttgggtaatttccacgtgcgtgccagctatgccagtgataag
cagatcgacgggcgggtggccagtttgcagaacgcagtggatgagtactacaaagccaag
aacgagtttgcggccaaggccaccgaagaccagatcaagctcctccgcagccagcggcgc
ctccaggccgactttgacaagccctacctggacgagtccctccacgacaccgtctacaac
ctcatcctagaggggaaccacaagcgagcggagcagttctaccgcgacttcaagatcccc
gacaaacggttctggtggctgaagatcaacgccttggctgagcaaggagactgggaagag
ctggagaagttctccaagtccaagaagtcccccattggatacctgccttttgtcgagatc
agcatgaagcaccacaaccgccacgaagcgaagaagtacgccccccgcgttgccccagag
cagagggtgaaagccttccttctggtaggggacttgagccaggcttccgacgccgccatc
gaacggaagaacgaggcagagatgaacctcatcctctcgaagtgcacggcggccgcagac
gcttctgtcgttgccaagatcaacctcgccaaagctcagcttggaaagaagtag
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integrated database retrieval system
