Podarcis muralis (common wall lizard): 114604729
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Entry
114604729 CDS
T06059
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114604729 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmua03041
]
114604729 (DHX15)
03009 Ribosome biogenesis [BR:
pmua03009
]
114604729 (DHX15)
Enzymes [BR:
pmua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114604729 (DHX15)
Spliceosome [BR:
pmua03041
]
Complex A
U2 snRNP components
U2 related factors
114604729 (DHX15)
Complex B
114604729 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114604729 (DHX15)
Ribosome biogenesis [BR:
pmua03009
]
Eukaryotic type
90S particles
Helicases
114604729 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
AAA_29
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
114604729
NCBI-ProteinID:
XP_028600994
LinkDB
All DBs
Position
9:complement(10535141..10587268)
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGEDYGSNKKRLAAPDGKDRDRERDRDDRSKDRDRDRDRDRDRERDKEKDLR
PSTNSALLPGVGLPPLKPAVLPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDIL
IRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKTNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEILSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgacctcggggaggactacggctccaacaagaagcggctc
gccgcccccgatgggaaggatcgagatcgtgaacgggatcgtgatgaccggtccaaagac
cgtgacagggatcgagatagagaccgtgacagggaaagagataaggaaaaggatttacgc
ccatcaaccaattccgcactccttcctggtgttgggttgccacctttaaagccagctgtc
cttccacagggtattaatccatttacaaatctaccacatacacctcgttattatgaaatc
ttaaagaaacgacttcagctccctgtctgggaatataaggaaagatttactgatattctg
atcagacaccagtctttcgtacttgttggtgagacaggttctggcaaaacaacacagatt
cctcagtggtgcgttgattatatgcggtcactgccggggccaaagagaggtgttgcttgt
acccagcccagaagagttgccgcaatgagtgtggcccagcgtgttgctgatgagatggat
gtcatgttaggacaagaagttgggtactctattcgatttgaagactgcagtagtgcaaaa
actattctgaagtacatgactgatggtatgttactacgtgaagctatgaatgaccctttg
ctggaacgttatggagtaataattcttgacgaagcccatgaaagaacactggctaccgat
attttgatgggagttctaaaagaggttgtaaggcaaagatctgatttaaaggttatagtt
atgagtgcaactcttgatgctggcaagtttcagatttattttgacaactgtcctctcctc
actattcctggccgtacgcatcctgtggagatcttttataccccagaaccggaaagggat
taccttgaggcagctattcgcacagtaatccagattcatatgtgtgaagaggaggaagga
gatctactactttttcttactgggcaagaggaaatagatgaagcctgcaagaggataaag
cgtgaaattgatgatctgggccctgaagttggtgacattaaaatcattccattatattct
acacttccgccgcagcagcaacagaggatttttgagcctccccctcccaaaaaaacaaat
ggtgcaataggacgaaaggtagttgtgtcaactaatattgctgagacatcattgacaata
gacggcgttgtgtttgtcattgatcctggatttgccaagcaaaaggtatacaatcctcgt
ataagagtcgagtctctcttggtgactgcaataagtaaagcttctgctcagcaaagagct
ggtcgtgctggtcgtactaggccaggcaagtgcttccgactgtatacggagaaggcttac
aaaaccgagatgcaggacaacacctatcctgaaattctaaggtccaacttgggttctgtg
gtattacagctgaagaaactaggcatagatgatttggttcattttgattttatggaccca
ccagctccagagaccttgatgagagcacttgagcttttgaattacctagctgctttaaat
gacgatggagacttgactgaactgggatccatgatggcagaatttcctctcgatccacag
ctggctaaaatggttatagcaagttgcgactacaactgttctaatgagattctatctatt
actgccatgctgtcagtcccacagtgttttgtgcgccccacggaagccaagaaagcggcg
gatgaggccaagatgaggttcgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaaacaaaatcatgaatcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggacaga
tttaatttgccgcgtagaagcacagacttcacaagcagggactattacatcaatattagg
aaggctttggttactggttacttcatgcaggtggcacatttggaacggacaggacactat
ctaacagtgaaggacaaccaggtagtgcagttgcatccttccacagttcttgatcacaag
cctgagtgggtactttacaacgaatttgttcttaccacgaagaactacatccgcacttgt
acagacatcaagccagaatggttggtgaaaattgcccctcaatattatgacatgagcaat
ttcccacagtgtgaagcaaagagacagttggaccgcatcattgccaaacttcagtccaag
gaatactcgcagtactga
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