Podarcis muralis (common wall lizard): 114604762
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Entry
114604762 CDS
T06059
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03030
DNA replication
pmua03410
Base excision repair
pmua03420
Nucleotide excision repair
pmua03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114604762 (RFC1)
03410 Base excision repair
114604762 (RFC1)
03420 Nucleotide excision repair
114604762 (RFC1)
03430 Mismatch repair
114604762 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmua03032
]
114604762 (RFC1)
03400 DNA repair and recombination proteins [BR:
pmua03400
]
114604762 (RFC1)
DNA replication proteins [BR:
pmua03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114604762 (RFC1)
DNA repair and recombination proteins [BR:
pmua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114604762 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
BRCT_2
AAA_14
AAA_30
AAA_5
RuvB_N
Rad17
RNA_helicase
AAA_19
AAA_17
AAA_16
PTCB-BRCT
AAA_18
AAA_33
Zeta_toxin
nSTAND3
AAA_7
NPHP3_N
TIP49
NTPase_1
Motif
Other DBs
NCBI-GeneID:
114604762
NCBI-ProteinID:
XP_028601072
UniProt:
A0A670JAL2
LinkDB
All DBs
Position
9:complement(16904278..16946010)
Genome browser
AA seq
1145 aa
AA seq
DB search
MDIRKFFGAVIPRNKQECDTTRKNEKPPNKEGASGEKSKLKEIKVKNSSRGEDSGHKQVN
KKKRIIYDSDSEEEVQVVKKSKKPPDRKQSSRPDKILKKDPVVYVSETDEEEDFVNKKVA
PKPKENGTSVAIRFGTPGASKTDPKPKLKNKPLSPVKLTPTSVIDYFGTGSIQRSEKKLV
SSKRKELSQSRDPTLDDEAVARQLQLEENTELERQLHEDEEFARTLAMLDETPKKKKPRK
DPEEKQITSTVKTSPIEAEKHKQAPKVKPASSTVDTRPNSAKDQVCSESTKTWSQHPESS
VSKERKDLGNKVLPSKPSSKLAVLKQKSESIKVENGTPKGETIKNESRTPKVKSVLPEET
PKKEKVTPPKSKSVSPEDSEKKRANYQAYRSYLNREGPRALGSKEIPQGGENCFEGLTFV
ITGILESIERDEAKSLIERYGGKVTGNISKKTDYLVKGRDCGAAKSDKALALGTKIIDED
GLFDLIRSMPGKKSKYEVAAEAEAKKAKSKCVKTPPKAEAERRKISPPTRESEPKKKKVT
PEKDNTVRSPKKQTMEARRGLDFDQKAPEKKDPKDVGSPIQKGSKGGAEVLLWVDKYKPT
SLKTIIGQQGDQSCANKLLRWLRNWHRNISQDKHAKPSKFGVKDDGASSKAALLSGPPGV
GKTTTASLVCEELGLSYVELNASDTRSKNSLKEVVAESLNNTSIKEFCSGTSSSVSTKHV
LIMDEVDGMAGNEDRGGIQELIDLIKHTKVPIICMCNDRNHPKMRSLVHYCFDLRFHRPR
VEQIKGAMMSIAFKEGLKIPPPAMNEVILAANQDIRQVLHNLSMWCARSKSLTYDGVKED
ANKAKKDIKLGPFDVVRKVFATGEETSHMSLIDKSDLFFHDYSLAPLFVQENYIHVTPAA
AGGNMKKHLMLLSKAADSICDGDLVDRQIRSRQNWSLLPTQAIYSSVLPGELMRGYMKQF
PNFPSWLGKFSSTGKHDRIMQELSMHMSLRTHASKRAVNLDYLSYLRDAIVKPLTCLGTD
GVQEAVAFMDTYCLMKEDVESLMEITSWGGKPSEFSKIDSKVKSAFTRAYNKEAHLAPYS
LQVVHKANRRAGSTVDEELEAEEIPSENEQDTIENDAMIKKTTKTAKQPKRNGDVKRGKA
KKKSK
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatatccggaaattctttggagcagtaattcctagaaataaacaagaatgtgacact
accagaaagaatgagaaacccccaaataaggagggggcttcaggtgaaaagtcaaaattg
aaggaaatcaaggtgaagaattcatctcgcggagaggattctgggcacaaacaggtgaac
aagaaaaagaggataatctatgattcagattctgaagaggaggtccaggtggtgaagaaa
tctaagaagccgccagatagaaaacagtcttcaagacctgataagattctaaagaaggac
cctgttgtttatgtttcagagacagatgaagaagaggactttgttaataagaaggtcgct
cccaaacccaaggaaaatgggacatctgtggctattcgttttgggacacctggagcatca
aagactgatcccaaaccaaaactgaaaaataaacccctatctccagtaaaactgacacca
acctctgtaattgattactttggaactggtagcattcagcgatcagagaagaaactggtg
tcaagcaaacgaaaagaactgtcacaaagcagggatcccacactagatgatgaggctgtt
gccaggcagctacagcttgaagagaatacagagttggagaggcaactgcatgaagatgaa
gaatttgccagaactctggccatgctggatgaaacaccaaagaagaaaaagcctcgaaaa
gatccagaagagaaacagataacttcaacagtcaaaactagtccaattgaagcagaaaaa
cataaacaggctcctaaagtaaaacctgccagttcaactgtggacacaaggcctaattct
gcaaaggaccaggtttgctcagaaagtacaaaaacatggagtcagcaccctgagtcttcc
gttagtaaagagaggaaggatttggggaataaggtgctgccctcaaagccaagttccaag
ttggctgtgctgaagcaaaaatcagaaagtattaaagtggaaaatggaactccaaaagga
gaaacgataaaaaatgaaagtaggactccaaaagtaaagtccgttttaccagaggagaca
cctaaaaaggagaaggttactcccccaaaatctaagtctgtaagtcctgaggactctgaa
aagaagcgagccaactatcaagcttatagaagctatcttaatcgtgaaggcccaagagca
cttggctctaaggagatcccacaaggtggtgaaaattgctttgaaggcctgacgtttgtg
atcacaggcatcttggaatccattgaacgcgatgaggccaaatctctgattgagcgctat
ggagggaaagtaactgggaatatcagtaagaagacagactatcttgtgaagggtcgtgac
tgcggcgcagccaagagtgacaaggccttagctttagggacaaaaataattgatgaagat
ggtttatttgacctgattcggagtatgccaggcaagaagtcaaagtatgaagtggcagct
gaagcagaggcaaagaaggccaaatccaagtgtgtgaaaaccccaccgaaagctgaagcg
gaaagaagaaaaattagccctccaactagagagagtgaacccaaaaagaaaaaagtcact
cctgaaaaggacaataccgtcagatctcccaagaagcaaacaatggaagcaaggagaggt
ctggactttgatcagaaagcgccggagaaaaaggatccgaaggatgttgggagcccaatt
caaaaaggcagtaaaggtggagctgaggtgttattatgggtggacaaatacaagcccaca
tcccttaaaacaatcattgggcaacaaggcgaccaaagctgtgccaataaactcttacgt
tggcttcgaaactggcacaggaatatttcgcaggacaaacacgcaaaacccagtaagttt
ggagtcaaagacgacggtgctagttcaaaagcagctttgctctctggccccccgggggtt
ggcaaaacgaccactgcttcactagtttgcgaagaactgggcttgagctatgtggaatta
aatgccagcgacactcgcagtaagaacagcctgaaggaggtggttgccgaatctctaaat
aacaccagcatcaaagagttctgttcaggcacatcatcttcagtcagcacaaagcatgtc
ctaattatggatgaggtggatggaatggctggcaacgaagacaggggcggcatccaggaa
ctgattgacctgattaaacatacaaaggttcctatcatttgtatgtgtaatgatcggaat
cacccaaagatgcgttcccttgtccactactgctttgatcttcgctttcacagaccacgc
gtggagcagattaagggtgccatgatgtccattgcctttaaagaggggttaaagattcca
ccaccagcaatgaatgaagtcatcttggcagccaatcaggatatcagacaagttttacat
aatctcagcatgtggtgtgcaaggagcaaatctctgacctacgatggtgtcaaagaggat
gctaacaaagcaaagaaggacatcaagctgggccctttcgatgttgtcaggaaggttttt
gctaccggagaagagacctctcacatgtcccttatagacaaatcagacctcttcttccac
gattactctctcgccccgctctttgtccaggagaactacatccacgtgaccccagctgct
gcagggggtaacatgaagaaacacctgatgttgcttagcaaagcagctgacagtatttgc
gatggcgacttagttgaccggcagattcgcagccgacaaaattggagccttctacctacg
caggccatttattcaagtgtcctccccggggagctgatgagaggctacatgaaacaattc
ccaaatttcccaagctggctgggcaaattttcatcaacaggaaagcacgaccgtatcatg
caagagctgtcgatgcacatgagcctcaggacacatgcaagcaagagagcagtaaatctg
gactatttgtcgtacttaagagatgcaattgtgaaacctttgacttgcctgggaacagat
ggagtgcaggaggctgtagcatttatggatacttactgcttgatgaaggaagatgtcgaa
agcctaatggaaataaccagttggggaggcaagcctagtgaattttctaaaattgattcc
aaggttaaatctgccttcacgcgagcctataacaaagaggcacaccttgcaccatattct
ctgcaagtggtgcataaggcgaatcgacgagcaggatcgacggtggatgaagaactggaa
gctgaagaaatcccgtctgagaatgagcaagacactattgaaaatgatgcaatgattaag
aagacaaccaagactgctaagcaaccaaaaaggaacggagatgttaaaagggggaaagca
aagaagaagtctaaataa
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