Podarcis muralis (common wall lizard): 114606208
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Entry
114606208 CDS
T06059
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
pmua
Podarcis muralis (common wall lizard)
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmua03021
]
114606208 (CHD1)
03036 Chromosome and associated proteins [BR:
pmua03036
]
114606208 (CHD1)
Transcription machinery [BR:
pmua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
114606208 (CHD1)
Chromosome and associated proteins [BR:
pmua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
114606208 (CHD1)
SLIK complex
114606208 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
114606208
NCBI-ProteinID:
XP_028603990
LinkDB
All DBs
Position
11:complement(39412285..39456000)
Genome browser
AA seq
1798 aa
AA seq
DB search
MNGHSDEESARNSSGESSQSDDDSGSASGSGSGSSSGSSSNGSSSQSGSSDSDSGSESGS
QSESESDTSKEKKVQAKPPKVDGAEFWKSNPSILAVQRSAMLRKQQQQSKAASSNSGSEE
DSSSSEDSADDSSSEIKRKKHKDEDWQMSGSGSVSGTASDSDLEESRDKSSCEESESDYE
PKNKVKSRKPPSRIKQKSGKKSGGQKKRQLDSSDDDDDDDDYDKRGSRRQATVNVSYKEA
EEAKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGATTTIYAVEADGDPNA
GFDKATEPGDVQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWLKN
ASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWED
GALIAKKFQSRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRDYQ
LNGLNWLAHSWCKSNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSW
QREIQIWAPQMNAVVYLGDITSRNVIRTHEWMHLQTKRLKFNILLTTYEILLKDKSFLGG
LNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPDKF
SSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQY
YKWILTRNYKALSKGSKGSTSGFLNVMMELKKCCNHCYLIKPPDDNEFYIKQEALQNLIR
SSGKLILLDKLLIRLRERGSRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQ
ALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK
QVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKEEL
SAILKFGAEELFKELEGEEQEPQEMDIDEILKRAETRENETGPLSVGDELLSQFKVANFS
NMDEDDIELEPEQNSRNWEEIIPEVHRRRLEEEERQKELEEIYMLPRMRNCAKQISFNGS
EGRRCRNRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPL
ERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDISSGQERAGGRLGKVKGPTFRIS
GVQVNAKLVISHEEELEPLHKSIPSDPEERKRYTVPCHTKAAHFDIDWGREDDSNLLIGI
YEYGYGSWEMIKMDPDLNLTQKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQRL
SGAGGSKRRKMRTKKSKTIKAAKIKEETKSDTSPPPSDKSEEEEEEDSKDEMAAVKHPSK
KIKAEKENEEKSDADIVLKKEADDKREAKENKRELKRERKEKEDKKELREKDAKEKKESK
AKEYMQREKEVKEEKMNESKSESKDKSKKSPSADTPVHITASSEPVPISEESEELDQKTF
SICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQW
RKNLWIFVSKFTEFDARKLHKLYKHAIKKRQETQQHNDQNISSSVNTHLIRNPADVERLK
ENTNHDDSSRDSYSSDRHLSQYHDHHKDRLHGDTYKKSDSRKRPYSSFSNGKDHRDWDHY
KQDSRYYSDGKHRKLDDHRNRDHRSSLEGSLKDSRSHSDHRIHLDHRSSSDYSHHKSSRD
YRYHSDWQMDHRASSSGPRSPLDQRAYDSRSPLGHRSPFEHSSDHKSTPEHMWSSRKT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgcaaggaacagtagtggagaatcaagccagtca
gatgatgattctggttcagcatcaggttctggatctggttccagttctggaagcagtagc
aatggaagtagcagccagtcgggaagcagcgattcagactctggttcagagtctggcagt
caatcagaatcggagtctgatacatctaaggaaaagaaagtccaagctaaacctccaaag
gttgatggagctgagttttggaaatcaaacccaagtattctggctgtacagagatcagca
atgctcaggaaacagcagcagcagtcaaaagcagcatcctcaaacagtggctcagaagag
gactcatcaagtagtgaagattctgccgatgactcatccagtgaaatcaagaggaagaaa
cataaagatgaagactggcaaatgtctgggtcaggatctgtctctggaactgcttcagat
tctgatttggaagaaagcagagataaaagtagttgtgaagagagcgaatctgactatgag
ccaaaaaacaaggtcaagagcaggaagcctccgagcagaataaagcaaaaaagtggaaag
aaaagtggggggcagaagaaaaggcagcttgactcatcagatgatgatgacgacgatgac
gattatgataaaagaggatctcgccgccaggcaacagtaaatgttagttacaaagaagct
gaagaagcaaagacagattcagatgatctgctggaagtctgtggagaggatgtcccacag
cctgaagaagatgaattcgagacaattgaaaaattcatggatagccgcattggaagaaaa
ggagcaactggtgctacaaccactatctatgcagttgaagctgatggagatccaaatgca
ggatttgataaagcaacagaacctggtgacgtgcagtacttgattaaatggaaaggctgg
tctcacatccataacacttgggaaacggaagaaaccctgaaacagcagaatgttagagga
atgaagaaactggacaactataagaaaaaggatcaagaaacaaaacggtggttaaaaaat
gcttctccagaggatgtggaatattataactgccagcaagaactcacagatgatttgcac
aaacagtatcaaatagtagaaagaataattgctcattcaaatcagaagtcagcagcaggt
tatccagactattattgtaaatggcagggtctcccttactcagaatgcagctgggaagat
ggtgctctcattgcaaaaaaattccagtcacgcattgacgagtattttagcagaaatcaa
tccaagacaactccttttaaggactgtaaggttttaaagcagaggccaaggtttgtggcc
ctaaagaaacaaccatcttacattggagggcatgaaggtttagagctaagagattatcag
ttaaatggactgaactggttagctcactcttggtgcaagagcaacagttgcattcttgca
gatgaaatgggcttgggcaaaacaatacaaactatctcctttctgaattatttgtttcat
gaacaccagttatatggacctttcttgctggtagtaccactttccactttgacatcttgg
caaagagaaatccagatatgggctccccagatgaatgctgtagtttatctgggggatatt
actagcagaaatgtgataagaacacatgaatggatgcatctacagaccaaaagattgaaa
tttaacatccttctgacaacttacgaaattttactgaaggataagtcattccttggtggt
ctgaactgggcatttataggagtagatgaagcccatcgattaaaaaatgatgattccctc
ttgtacaagacgttaatagacttcaagtccaatcatcgcctccttatcactggaacacct
ctgcaaaattccctgaaagagctctggtccttgctgcacttcatcatgccagataagttt
tcttcttgggaagattttgaagaggaacatgggaaaggaagggaatttggctacgcaagt
cttcacaaagaactcgaaccatttctattaaggagagttaagaaggacgtagaaaaatct
cttcctgccaaggttgaacaaattttaagaatggagatgagtgcattgcaaaagcaatat
tataagtggattttaactaggaattacaaagccttaagtaaaggttcaaagggcagtacc
tcaggctttctgaatgtcatgatggagctcaaaaagtgttgcaatcattgctacctcatt
aaaccaccagatgataatgaattctatattaaacaggaggccttacagaatttaatccgg
agtagtgggaagctcattcttttagacaagctgctgattcgcttacgagaacgtggcagc
agagtgcttatattttctcaaatggtgcggatgctggacatccttgctgaatatttgaaa
tatcgtcagtttccctttcagaggctagatgggtcaataaaaggagaactgaggaaacaa
gcactggaccattttaatgcagaaggttctgaggacttctgctttttactgtctaccaga
gctggaggtctaggcataaacttggcatctgcagatactgttgttatatttgattctgac
tggaaccctcagaatgatctgcaagcacaggctagagctcataggattgggcagaagaaa
caggtaaacatttatcggctagtcactaaaggatctgtagaggaagatatcctggaaaga
gccaagaagaaaatggttttagatcaccttgtcattcagagaatggacactacaggaaag
actgtgctgcacacaggttctgcaccttctagctctactccttttaacaaagaggagctg
tcagctattttaaagtttggtgctgaggaactttttaaggaactggaaggtgaagaacaa
gagccacaagaaatggacatagatgaaatcttgaagagggctgaaacacgggaaaatgaa
actggcccattaagtgtcggagatgaattgctttcccagtttaaggtggcaaatttctcc
aatatggatgaagatgacattgaactggagcctgaacaaaattcaaggaactgggaagaa
atcattccagaggtccataggagaagattagaagaagaggaaaggcaaaaggaactggaa
gaaatttatatgttacccagaatgagaaactgtgcaaaacagatcagcttcaatggaagc
gaaggcagacgttgtagaaacagaaggtattctggatcagatagtgactccatctcggaa
agaaaacgacccaaaaaacgtggaagaccacggactattccacgggaaaacattaaagga
tttagtgatgcagagattcggcggtttatcaagagttacaagaaatttgggggacctctt
gaaaggttagatgccatagcaagagatgctgaattagtcgataaatctgagacagacctc
cgacggcttggagagctggtacataatggatgtatcaaggctttaaaggacatctcatct
ggacaagaaagagcagggggcagacttggaaaagttaaaggcccaacgttccgaatatcg
ggagtgcaggtaaatgcaaaactagtcatctctcatgaagaagagctggaaccattacac
aaatccattccttccgatccagaggaaaggaagagatacaccgttccttgtcacactaag
gctgctcattttgatatagactggggcagggaagatgactctaatcttctaataggcatc
tatgaatatggatatggtagctgggaaatgatcaaaatggacccagatctcaacttgaca
caaaagattcttccagatgatccagataagaaaccccaagccaaacagttgcagacccgt
gcagactacctcataaaattactcagtaaggatcttgcaaggaaggaagcacaaagacta
tctggggcaggaggctcaaaaagaaggaaaatgagaacaaagaagagtaagaccataaaa
gcagcaaaaattaaggaggagacaaaaagtgatacatcaccaccaccttcagataagtct
gaggaagaagaagaggaagatagtaaggatgaaatggctgcagtaaaacatccaagcaaa
aagataaaagcagaaaaagaaaatgaagaaaaatctgatgcagatattgttctgaagaag
gaggctgatgacaaaagagaggccaaggaaaacaagagggagctgaaaagggagagaaaa
gaaaaagaggacaaaaaagaattaagggaaaaagatgcaaaagagaagaaggaaagtaaa
gcaaaagagtacatgcagagagagaaagaagtaaaagaagagaagatgaatgagtccaaa
tctgaaagcaaagacaaaagcaagaaatctccttcggcagacactcctgttcatataaca
gcaagtagtgagccagttcctatatctgaagaatctgaagaactggatcagaagacattc
agtatttgtaaagaaagaatgaggcctgtcaaagcagcactgaaacagctggatagacca
gagaaaggtctttcagaaagggaacaactagaacatactagacagtgtcttatcaaaatt
ggagatcacattacggagtgtctaaaagaatacacaaatcctgaacaaataaagcagtgg
cgaaaaaacctgtggatttttgtttccaagtttacagaatttgatgccagaaagctacac
aaattgtacaaacatgcaattaaaaaacgccaagaaacacagcagcacaatgaccagaat
atcagcagcagtgtgaatacacatttgattagaaatccagcagatgtggaacgcctaaaa
gagaatacgaatcatgacgatagtagcagagacagttattcctctgacagacacttatca
cagtatcacgatcatcacaaagatagacttcatggagatacctacaagaaaagtgactct
aggaaaaggccttattccagcttcagcaatggaaaagatcatagagattgggatcactat
aaacaggatagcagatactacagtgatggaaagcacagaaagctagatgaccataggaac
agagatcacaggtccagtctggaaggaagcttaaaagacagtcggtcacactccgatcat
cggatacacttagaccatcgatccagttcagactacagccatcataaatcttcgagggac
tataggtatcactcggactggcaaatggaccacagagcttccagcagcggtcctaggtca
ccattagatcagagagcttatgactccagatctcccttaggacacagatctccttttgaa
cattcatcagatcacaaaagtacaccggaacatatgtggagtagccggaagacatag
DBGET
integrated database retrieval system
