KEGG   Podarcis muralis (common wall lizard): 114607088
Entry
114607088         CDS       T06059                                 
Symbol
WDR48
Name
(RefSeq) LOW QUALITY PROTEIN: WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    114607088 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmua03400]
    114607088 (WDR48)
DNA repair and recombination proteins [BR:pmua03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     114607088 (WDR48)
SSDB
Motif
Pfam: DUF3337 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 114607088
NCBI-ProteinID: XP_028605723
LinkDB
Position
12:complement(9893646..9928569)
AA seq 677 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPALWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPITPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEMNHVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETESM
LLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEHV
YEKIINLDNESQTTSSSNNEKAGEQXKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcggctcatcaccgacagaacacggcggggcggcggaaagtgcaggtctcctatgta
attagagatgaggtggagaagtacaatcgaaatggggtaaatgcactgcagctggaccca
gcgctaaacagactttttacagcaggccgagactccatcatcaggatatggagcgtcaac
cagcacaagcaagacccttatatagcatctatggaacatcatacagactgggtgaatgat
attgtactctgctgcaatggcaaaacgttgatatctgcttcatccgatactactgttaaa
gtatggaatgcacataagggattttgcatgtcaacactaaggacccacaaggattatgtg
aaagccttggcgtatgcaaaagataaagagctggtggcatctgctgggctggacagacag
atattcctctgggatgtaaatacgctaacagcactgactgcctcaaataacactgtcacg
acttcttccctcagtgggaacaaagattctatctacagtcttgccatgaatcagatggga
acagtaattgtatcagggtccactgaaaaggtattaagggtctgggatccaagaacctgt
gcaaagcttatgaaactcaaggggcacacagacaatgttaaagctttgctattgaacaga
gatggcacacagtgtctttctggcagctctgatgggactatcagactctggtcccttggt
cagcagagatgtatagctacatacagagtccatgatgagggtgtatgggcacttcaagtc
aatgaagccttcactcacgtatattcaggtggaagagacagaaagatatactgtacagat
ctacgaaatcctgatattcgggtgctcatttgtgaagaaaaggcacctgtccttaagatg
gagctagatcgatcagctgaccctcctccagccctctgggttgcaacaacaaaatcatct
gtgaataagtggactttgaaaggaattcacaactttagagcttccggggactatgacaac
gactgtaccaacccaatcacacccctttgtacacagcctgaccaagttattaaagggggt
gctagtattattcagtgccacattctcaatgacaaaagacacatattaaccaaagacaca
aacaacaacgtggcgtactgggacgtgttgaaggcatgtaaagtagaagaccttgggaaa
gtggactttgaagaagaaattaagaaaaggtttaaaatggtttacgtgccaaattggttt
tcagtagacttaaaaactgggatgttgacaattactttagatgagagtgactgctttgca
gcttgggtctcagcaaaagatgctgggtttagcagtccagatggctctgatccaaaattg
aacctgggagggctcctactgcaagctctcttagagtattggcctagaacccacatcaat
cctatggatgaagaagaaaatgagatgaaccatgtgaacggcgagcaggagaacagagta
cagaaaggaaacggatacttccaagtgccaccgcacacgccagttatttttggcgaagct
ggaggacgcactttgtttagattgctatgtcgggattccgggggtgagactgaatccatg
ctccttaacgaaacagtgccacaatgggtaattgacatcactgtggataagaatatgcca
aaatttaataagattcctttctacctccaacctcattcctcttccggagcaaaaacgtta
aagaaggatcgactgtcagccagtgacatgttgcaagtcaggaaggtgatggagcatgtt
tatgaaaaaataataaatctggacaatgaatctcagacaaccagctcttccaataatgaa
aaggccggggaacaangaaaagaggaggacattgctgttttagcagaagagaaaattgaa
cttctgtgccaggaccaggtattggatccaaatatggaccttcgaaccgtcaaacacttc
atatggaagagtggtggcgacttgactctccactaccgccagaagtcgacgtga

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