Podarcis muralis (common wall lizard): 114607156
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Entry
114607156 CDS
T06059
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04140
Autophagy - animal
pmua04148
Efferocytosis
pmua05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114607156 (VPS41)
04148 Efferocytosis
114607156 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114607156 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmua04131
]
114607156 (VPS41)
Membrane trafficking [BR:
pmua04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
114607156 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_EML_2
Vps39_1
TPR_GEMI5
WD40_WDHD1_1st
Beta-prop_RIG_2nd
zf-RING_5
Beta-prop_IFT140_2nd
zf-RING_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114607156
NCBI-ProteinID:
XP_028605910
UniProt:
A0A670JJV0
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All DBs
Position
12:complement(55804576..55919851)
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AA seq
854 aa
AA seq
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MAEAEPQEPRCNEESTDESEEDDSEEEPKLKYERLSNGVTEILQKDVASCMMVHEKFLAL
GTHYGKVYLLDVQGNITQKFDISPVKINQISLDESGEHMGVCSEDGKVQVFGLYTGEEFH
ETFDCPIKIVAVHPQFVRSHCKQFVTGGNKLFLYEKSWMNRWKPSVLHEGEGNIRNVKWR
GNLIAWANNMGVKILDVIAKQRITNVPRDDINLRPDMYPCSLCWKDNLTLIIGWGNSVKI
CSVKERHASEMRDLPSRYVEIVSQFNTEFYISGIAPLCDQLVILSYVKEISEKTEKECCS
RPRLDIIQPFPESCEEISSDALTVRRFQENECRDYCLEYSEGESLFYIISPRDVVVAKER
DQDDHIEWLLEKKKYEEALMAAEISQKTMKKHKIQDIGLAYINHLMEIGEYDLAARKCQK
ILGKNTDLWEFEVHRFKEIGQLKAISRYLPRRDSVLKPFIYEMVLHEFLESDYEGFATLI
KEWPGNLYNNAIIVQAVVDHLKKDPQNRTLLKTLAELYTYDQRYGKALEIYLTLRHKDVF
QLIHKHNLFSSIRDKIVLLMEFDSEKAVDMLLDNEDKISIDKVVEELKNRPELQHVYLHK
LFKRDHHKGQKYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELYDVDKAIEFAKEQDDAELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
RGVLVDEENICETCLSPILPTDASKSFSVTVFHCRHMFHKECFPELSTDSSVHFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcggagccgcaggagcccaggtgcaatgaagaatctacagatgagtctgag
gaagatgacagtgaagaggagcccaagctgaagtatgaaaggctttctaatggtgttacg
gaaattcttcaaaaggacgtcgccagttgcatgatggttcatgagaagtttttggcgctt
ggaacgcattatggcaaagtttatttactcgatgtccaggggaatatcacccagaagttt
gacattagtccagttaagataaatcaaattagcctggatgaaagtggagagcacatgggt
gtttgctctgaagatggcaaggtgcaggtgtttggattgtacacaggggaagaattccac
gaaacatttgattgccctattaaaattgtcgctgttcaccctcaatttgtgagatcacac
tgcaagcagtttgtaactggagggaacaaattgtttttatatgaaaagtcatggatgaac
agatggaaaccttcagttttacatgaaggagagggaaatatcagaaatgttaaatggaga
ggaaacctgattgcttgggccaataatatgggcgtgaagatactcgacgtgattgctaag
caaagaatcaccaacgtgccccgagacgatataaacctccgtcctgatatgtatccctgc
agcctttgctggaaagataatttaacactgattattggctggggaaattcagtaaagata
tgctcagtcaaagagcgacatgccagtgaaatgcgagatctgccaagtcgttacgtggaa
atagtttcccagttcaacactgaattttacatcagtggaattgcacctctctgtgaccag
cttgtcatactttcatatgtaaaggagatttcagagaaaactgaaaaggagtgttgttcc
agacctaggctggatataatccagccatttcctgaatcttgtgaagaaatctcctccgat
gccctaactgtgaggcgcttccaagaaaatgaatgccgtgattattgtttggaatattca
gagggtgaatcactgttttatatcatcagtccaagagatgttgttgtggccaaagaacgt
gaccaggatgaccatattgaatggctcttggaaaagaagaaatatgaagaggctttgatg
gcagctgagatcagccagaagaccatgaaaaaacacaagattcaggatataggtttggcc
tacataaaccatctgatggaaattggagagtatgacctggcagcacgaaaatgccagaaa
atacttggcaagaacacagatctctgggaatttgaggtgcacaggtttaaagaaattgga
caacttaaggcgattagccgctatttgccaagacgggattcagtcctgaagccttttatc
tatgaaatggtcctacatgaatttctggaaagcgactatgagggttttgcaacattaatt
aaggagtggcctgggaacctttataacaatgcaatcattgtccaagcagtggtggatcat
ctgaagaaagatccacagaacaggactttgctgaaaacgcttgcagagttgtacacctat
gaccaacgctacggaaaggcccttgaaatttatctcacactgagacataaagatgttttc
cagctgatccacaaacacaatcttttcagctccatcagggacaaaattgttctgctaatg
gagtttgattcagagaaagcagttgacatgcttttggataatgaagacaagatctctatt
gataaagtggtggaagaattaaaaaacaggcctgaactgcagcatgtgtacctgcacaag
ctgttcaagagagaccatcacaaaggacaaaagtaccatgagaaacagatcagtctgtat
gctgaatatgaccggccaaatttacttccgtttctcagagacagcactcattgcccttta
gaaaaggctcttgaaatctgtcagcaaaggaactttgtagaagagacagtttatcttttg
agcagaatgggcaatagtcgaagtgctctgaagatgatcatggaggaattatatgatgtg
gataaggctattgaatttgctaaggagcaagatgatgcagaactgtgggaagatctcatc
ttgtactccattgacaaaccaccttttattaccggcttgttaaataacattgggacccac
gttgaccccatcctcctgatccaccgcattaaggaaggcatggagattccaaacctgaga
gattcactggtaaaaattcttcaggattataacttacagattttgctccgggaggggtgc
aagaagattcttgttgctgactcgctttccttgctgaaaaagatgcaccgaacacaaatg
agaggagtccttgtggatgaggagaatatatgtgaaacatgcctttcccctatactgcct
acagatgcatctaaatctttcagtgtaacagtgtttcactgcaggcatatgttccacaaa
gagtgttttcctgaacttagcacagattcgtcggtacacttctgtaacatctgcagtgct
aaacacagaggtccaggcagtgccatcttggagatgaaaaaataa
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