Podarcis muralis (common wall lizard): 114607223
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Entry
114607223 CDS
T06059
Symbol
CNOT10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114607223 (CNOT10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114607223 (CNOT10)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114607223 (CNOT10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
ARM_TT21_N
TPR_12
TPR_8
ANAPC3
ARM_TT21
TPR_17
TPR_7
SCAF11-like_C
RdRP_head
DUF6058
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
114607223
NCBI-ProteinID:
XP_028606042
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Position
12:45903287..45925174
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AA seq
744 aa
AA seq
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MAADKGGDQGAEKHEAAGTSSGITDQEKELSNSALQAFMAGNYEACLQHLSCLQEINKDD
YKIVLNMAVAEFCKSNQTTTDNLKQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVIL
YHLRQYTEAIIVGEKLYQFIEPFEERFAQAVCFLLVDLYLLTCQAEKALHLLAVLEKMIL
QGGNNKNGKNETGNNTSKEASNHKAESGTLTEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMGKHNLGIFYFKKALQENDNACAQLGTGGSDTGKKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGSSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSVQNIVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPK
QENGSKIGNQLGGNNENSENNEACSSKSHEGDKFVPAPPSSPLKKQELENLRCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSEKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYD
KARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKMLSEMRK
KPVFQPTHLVQPIQMPAFTSAQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggacaaaggcggagatcagggagcagaaaaacatgaagcagcaggcacatca
tctgggattactgatcaagagaaggagctctcaaacagtgctctgcaagcattcatggct
ggcaactatgaagcttgtctgcaacaccttagctgcttgcaagaaattaacaaggatgat
tacaaaatagttttgaacatggcagtagcagagttctgtaaaagtaatcagacgacaact
gacaacttgaagcaaacacttaatcagctgaaaaatcaggttcattcagctgttgaggaa
atggatggattagatgatgttgaaaacagcatgctttactacaatcaagctgttattttg
taccatcttcggcagtatactgaagcaataatagttggagagaagctttatcaattcata
gaaccttttgaggagagatttgcccaggcagtgtgcttcctgctcgtagacttatacctg
cttacttgccaagctgaaaaagccttgcatctgcttgctgtattggaaaaaatgatttta
caaggtggcaacaacaaaaatgggaaaaatgagacaggtaataacactagtaaggaagct
tccaatcacaaagctgaaagtggaaccctgacagaagctgccaagtctaaaatacatcag
tataaggtgcgagcctatattcagatgaagtctctgaaagcatgcaagagggagataaag
tccgttatgaacacagctggaaattctgctccttctctctttctgaaaagcaattttgag
tatttaagaggcaattatcggaaagcagtaaagctgctgaacagctcaaacatcgcagaa
catccgggatttatgaaaacaggtgaatgcttacggtgcatgttctggaataaccttggg
tgcatccattttgctatggggaaacacaacttgggaattttctatttcaaaaaggccttg
caggagaatgacaacgcttgtgcacagcttggaacaggtggctccgacacaggtaaaaag
ttctcaggacgaccaatgtgcaccttgttgactaacaagcgttatgagttgctgtataac
tgcggcattcagctcttgcacattgggagaccgctagctgcttttgaatgcctgatagaa
gctgtccaagtttatcattcgaaccctcgtctctggctaaggatagccgaatgctgtata
gctgccaataaaggaagttcagaacaagaaacaaaaggacttccaagcaaaaagggcatt
gtacagtccattgtaggtcaaggatatcatcgtaaaatagtactggcatcccagtctgta
cagaacattgtttataacgatggccagtcttcagctattcctgtagctagtatggagttt
gcagcaatttgtctaagaaatgccttgctgcttcttcctgaagaccagcaggagccaaag
caggaaaatggatctaaaattggcaaccagttgggagggaataatgagaacagcgagaac
aatgaagcttgcagtagcaaaagccacgaaggagacaaatttgttcctgctccaccatct
tctccactgaagaagcaagaactagaaaatttaaggtgttcaatacttgcttgcagtgct
tatgtggctctggccctgggggacaaccttatggctttgaatcatgcagacaaacttctc
cagcagcccaaactgtcaggatcccttaagttccttggccatttgtatgctgcagaggct
ctcatctctctagacagaatctctgatgccattactcacttgaacccggaaaatgtcact
gatgtgtccctggggatttcttcaaacgagcaggatcaaggatctgagaaaggagaaaat
gaagcaatggaatcctctggcaagcaaaccccacaatgttaccccagttctgtcacatct
gcacggaccatgatgctgttcaaccttggaagcgcctactgcttgagaagcgaatatgac
aaagcacggaagtgtctgcaccaggctgcctcactgattcatccgaaagagatcccaccc
gaggccatcttgctggctgtataccttgaacttcagaatggaaacacacagctggcactg
cagatcatcaaaagaaaccagcttcttcctacagtgaaaatgctctctgagatgcggaag
aagcctgtgtttcagccaacacacctggtccagcctattcaaatgcctgcattcacctct
gctcagaggaagtga
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