KEGG   Podarcis muralis (common wall lizard): 114607408
Entry
114607408         CDS       T06059                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
pmua  Podarcis muralis (common wall lizard)
Pathway
pmua04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmua00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    114607408 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmua03019]
    114607408 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pmua04812]
    114607408 (VIM)
   04147 Exosome [BR:pmua04147]
    114607408 (VIM)
Messenger RNA biogenesis [BR:pmua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     114607408 (VIM)
Cytoskeleton proteins [BR:pmua04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     114607408 (VIM)
Exosome [BR:pmua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   114607408 (VIM)
  Exosomal proteins of other cancer cells
   114607408 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri BLOC1_2 DUF4407 LAMB4
Other DBs
NCBI-GeneID: 114607408
NCBI-ProteinID: XP_028606396
UniProt: A0A670IW75
LinkDB
Position
12:complement(25312496..25326320)
AA seq 463 aa
MSTTSSSRSSYRRMFGGAGGRPSSSSSSRYVTSSSRYSLGSARPSSVRLVSSAPGGGGLY
ASKAVRLRGSLPPMRMLGMDGGVDFSLADAINTEFKANRTNEKAELQELNDRFANYIDKV
RFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVDRDNLAED
IMRLREKLQDEMLQREEAENNLQSFRQDVDNASLNRLDLERKVESLQEEIIFLKKLHDEE
IRELQAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEA
ASRNNDALRQAKQEANEYRRQIQSLTCEVDALKGTNESLERQMREMEENFNLEAANYQDN
IARLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRITMPIPTFASL
NLRETNLESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagtaccaccagcagcagccggagctcctaccgccgcatgttcggcggggcgggcggg
cggcccagctcttcgagcagcagccgctacgtgacgtcgtcgagccgctactcgctgggc
agcgcccggcccagcagcgtccgcctggtgtcgtcggcgcccggcggcggcggcctctac
gcctccaaggccgtgcgcctgcggggcagcctgccgcccatgcggatgctgggcatggat
ggcggcgtggacttctctctggccgacgccatcaacacggagttcaaggccaaccgcacc
aacgagaaagccgaactgcaggagctcaacgaccgcttcgccaactacatcgacaaagtg
cgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggcaaa
ggcacttcccgcctgggcgacctctacgaggaggagatgcgcgagctgcgccggcaggtg
gaccagctcaccaatgacaaggcccgcgtggaggtggaccgcgacaacttggccgaagac
atcatgcgcctgcgggaaaaacttcaagatgagatgcttcagagggaagaagctgagaac
aacctgcaatctttcagacaggatgttgacaatgcctccttgaaccgcctggatcttgaa
cgcaaagttgaatctctgcaagaagagattatcttcttgaagaagctccatgatgaggaa
atccgtgagcttcaggcccagatccaggaacaacatatccagatcgatgtggatgttgcc
aaacctgatctcactgctgccctgcgcgatgtgcgtcaacagtacgaaagtgttgctgct
aagaacctccaggaagctgaagagtggtacaaatccaaatttgcagatctgtctgaagca
gcctcccggaacaatgatgccctgcgccaggccaaacaagaagcgaatgagtaccgcagg
caaattcagagtctcacctgtgaagtggatgcacttaaaggaactaacgaatccctggaa
cgccagatgcgtgagatggaggagaactttaatcttgaagctgctaactaccaagacaac
attgcccgactccaggatgagatccaaaacatgaaggaagaaatggctcgccatctgcgc
gagtaccaagagctgctgaatgtaaagatggctcttgatattgagattgccacttacagg
aaactgctggagggagaagagagcagaatcacaatgcccattccgacttttgcttccctg
aacctgagagaaacaaaccttgagtctatcccaatagacacccactccaagagaacactt
cttatcaagactgttgaaactagagatggacaagttatcaatgaaacttctcaccatgat
gaactggagtga

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