Podarcis muralis (common wall lizard): 114607408
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Entry
114607408 CDS
T06059
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114607408 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmua03019
]
114607408 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pmua04812
]
114607408 (VIM)
04147 Exosome [BR:
pmua04147
]
114607408 (VIM)
Messenger RNA biogenesis [BR:
pmua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
114607408 (VIM)
Cytoskeleton proteins [BR:
pmua04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
114607408 (VIM)
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114607408 (VIM)
Exosomal proteins of other cancer cells
114607408 (VIM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
BLOC1_2
DUF4407
LAMB4
Motif
Other DBs
NCBI-GeneID:
114607408
NCBI-ProteinID:
XP_028606396
UniProt:
A0A670IW75
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All DBs
Position
12:complement(25312496..25326320)
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AA seq
463 aa
AA seq
DB search
MSTTSSSRSSYRRMFGGAGGRPSSSSSSRYVTSSSRYSLGSARPSSVRLVSSAPGGGGLY
ASKAVRLRGSLPPMRMLGMDGGVDFSLADAINTEFKANRTNEKAELQELNDRFANYIDKV
RFLEQQNKILLAELEQLKGKGTSRLGDLYEEEMRELRRQVDQLTNDKARVEVDRDNLAED
IMRLREKLQDEMLQREEAENNLQSFRQDVDNASLNRLDLERKVESLQEEIIFLKKLHDEE
IRELQAQIQEQHIQIDVDVAKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEA
ASRNNDALRQAKQEANEYRRQIQSLTCEVDALKGTNESLERQMREMEENFNLEAANYQDN
IARLQDEIQNMKEEMARHLREYQELLNVKMALDIEIATYRKLLEGEESRITMPIPTFASL
NLRETNLESIPIDTHSKRTLLIKTVETRDGQVINETSHHDELE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaccagcagcagccggagctcctaccgccgcatgttcggcggggcgggcggg
cggcccagctcttcgagcagcagccgctacgtgacgtcgtcgagccgctactcgctgggc
agcgcccggcccagcagcgtccgcctggtgtcgtcggcgcccggcggcggcggcctctac
gcctccaaggccgtgcgcctgcggggcagcctgccgcccatgcggatgctgggcatggat
ggcggcgtggacttctctctggccgacgccatcaacacggagttcaaggccaaccgcacc
aacgagaaagccgaactgcaggagctcaacgaccgcttcgccaactacatcgacaaagtg
cgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggcaaa
ggcacttcccgcctgggcgacctctacgaggaggagatgcgcgagctgcgccggcaggtg
gaccagctcaccaatgacaaggcccgcgtggaggtggaccgcgacaacttggccgaagac
atcatgcgcctgcgggaaaaacttcaagatgagatgcttcagagggaagaagctgagaac
aacctgcaatctttcagacaggatgttgacaatgcctccttgaaccgcctggatcttgaa
cgcaaagttgaatctctgcaagaagagattatcttcttgaagaagctccatgatgaggaa
atccgtgagcttcaggcccagatccaggaacaacatatccagatcgatgtggatgttgcc
aaacctgatctcactgctgccctgcgcgatgtgcgtcaacagtacgaaagtgttgctgct
aagaacctccaggaagctgaagagtggtacaaatccaaatttgcagatctgtctgaagca
gcctcccggaacaatgatgccctgcgccaggccaaacaagaagcgaatgagtaccgcagg
caaattcagagtctcacctgtgaagtggatgcacttaaaggaactaacgaatccctggaa
cgccagatgcgtgagatggaggagaactttaatcttgaagctgctaactaccaagacaac
attgcccgactccaggatgagatccaaaacatgaaggaagaaatggctcgccatctgcgc
gagtaccaagagctgctgaatgtaaagatggctcttgatattgagattgccacttacagg
aaactgctggagggagaagagagcagaatcacaatgcccattccgacttttgcttccctg
aacctgagagaaacaaaccttgagtctatcccaatagacacccactccaagagaacactt
cttatcaagactgttgaaactagagatggacaagttatcaatgaaacttctcaccatgat
gaactggagtga
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