Podarcis muralis (common wall lizard): 114607442
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Entry
114607442 CDS
T06059
Name
(RefSeq) collagen alpha-6(VI) chain-like isoform X1
KO
K06238
collagen type VI alpha
Organism
pmua
Podarcis muralis (common wall lizard)
Pathway
pmua04510
Focal adhesion
pmua04512
ECM-receptor interaction
pmua04518
Integrin signaling
pmua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114607442
04518 Integrin signaling
114607442
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114607442
09142 Cell motility
04820 Cytoskeleton in muscle cells
114607442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmua04147
]
114607442
00536 Glycosaminoglycan binding proteins [BR:
pmua00536
]
114607442
Exosome [BR:
pmua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114607442
Glycosaminoglycan binding proteins [BR:
pmua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114607442
Hyaluronan
Extracellular matrix or blood plasma proteins
114607442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
vWA_SIBA-E
DJ-1_PfpI
Motif
Other DBs
NCBI-GeneID:
114607442
NCBI-ProteinID:
XP_028606462
LinkDB
All DBs
Position
12:47314410..47388583
Genome browser
AA seq
2248 aa
AA seq
DB search
MKMFLIFLLVTLGAKTSTAQRPASESADIVLLIDSSDALGRRAFPSVKSFVNRIINSLPI
GPNRYRIALVQYSDDVKVEFQLDDYKAKNPMLNQLKKVSFKGGPLRTGNAIRRVHETFFR
SPRKDRSQIVVVTTSATSDDPVEEAASRLRRDGIKIIALGIQEAVPQALQSIATPPFHYK
FGTPRDLLAFSQNMSEVIGKAAQMEIFTATPTPAPPSVTESVTGTFGPVSPEALTCHKNS
VADIVFIVDEGVSQANAEHIREFLQNTVNSLDVKEACIRMGIVTYSTEAKVLTSLGDETK
KTDILQKIRSFSPKEGKSHLGAAINMTTKRVFADRRRSVEKVATIITHRPSDDDITGAAS
LISRAGVTVFAIGVERADTAQLTQVVSYPSEPNIIKLTEFSDLPRQDKTFHKKLFNKIKL
RLYIQPEMKKQIKSGCMDTERADIYFLLDDSSSIHVEEFKNMTSFVMEAIKLFTIGPDNV
RFGVVQYSENTILPIRLGQHTTRISLEKEMNRIRHRALLETNTGAAINFTRPLFKDARQQ
CRGNVPCYLIVLTDGKAHDDVKVAAQLLRQANVSIYAIGVKNASKEELFHIAGSTSRVYF
VQQFEALEEIKNVVVRDICNEKACEVRKVDVMFLVDSSGSIHPEDFAKMQNFMAEFVKKS
NIGPEQMCVGAVQFSGTTKEKFPLNRYLTKNDIIDAIGSMSLIGANTLTGEALVFISDYF
EAAKGARPGAHKVLILITDGEAQDEVKTPATALRDKGITIYSVGVFNANKTQLEEISGKP
ERVFYVENFDVLNKVQNELRFGVCNPEEECKRLERLDIVFVIDSSGSIGPNNYNLMKNFM
IGIVNKSDVGKELVQFGALKYSDDPHILFDLDDHSTQSAVIDAIRSDTHLGGNTYTAAAL
EHSKALFTEARGSRKHRGVSQILMVITDGESHDKERLEKVSKKLRDDKITILAIGIKEAK
LDELLTMAGSEENLYFVDTFEGLQNISKKLSDNLCNNSRPECEIQADLVFLIDGSRSIPP
KDFERMKVFLKNLLDLIDYNDNVRVGMAQFADRYEEEFGLGAYQNKPELQEKIISVTMMK
GGNTYIGEALKGVKAFFNSTRRRIPRHIVVPKLLLITDGVSDDPVADSARALAADGVEIH
AIGVGTVDRAKLMEITDDSDRIYSVANFTDLPSILTRVTKEMCQDKSEAICFMDVVIGFD
ISSQKAGDHIFHEQHLLETYLPDILKDFTSYGAVSCNKGTKTQFSVANLIENTDTPFLRT
LQVDHEKILEDLRKVRLNGPSYLNVEFLDSLWNVFENVSGNHMRSQVLLVFSDGLDADKE
VLKKKSEELRKKGLDGIITVALEGVTNFADLLDIEFGKGFGYNKQLSMGTQNIASRLFAF
VTQIAERTCCCKFCTCMPEEGPRGPKGKIGTQGSTGLSGHHGYTGEDGEPGSRGFPGPEG
PQGYRGDPGSQGMKGLQGRTGRKGEKGDGGIDGTEGEEGSHGLPGHKGEKGDAGLQGSPG
PSGLPGGEGEKGFQGDHGDSGEDNDVEGAKGYKGSQGSRGEKGSQGFTGENGSPGNSGPE
GRSGLPGPPGTKGNRGPRGLEGKQGFEGQQGTSGIPGVKGEKGHSGNKGLPGNLGIPGPK
GNQGKPGLRGNEGEPGDTGTKGPAGPRGPQGMRGDEGIPGYGEEGKKGSKGEEGFPGDIG
LQGEHGDPGLPGKPGPKGARGRMGIPGLKGEPGGPGAWGLPGRPGPKGEKGLSSFSPCEL
TEYLREHSPCWRGTLECPVYPTDLVFALDASQDTTPQIFEQMREMVIAVVNNTQIRESNC
PVGARVAVVCYNSETHYLIRFSDFHNKQRLLEEIAKLSYQRSTNRRDTGTSMRFVARNVF
KRTLPGANMRKVAVFFSNGPSDNGDSLSTAVLEFSAFDIHPAVIAFKTIPSIHRAFALGD
TRLFQVIQPGRDYTLALQRLQSCVLCYDKCKPDSSCFRAETPRARGYVDAAFILENSRKI
SPVEFQKLKDFLSAALDSFDISAEPETSLTGDRVAVLSHAPLEFRPRTRRSPVEIEFDFL
TYGSKLRMKRHIQESIQQLNGVAALGHAIQWTVSNIFSEAPNQRKYKAIFVVSVGETSRW
DKEVLRDAALRAKCLGYALFVLSLGDEYDDVEIEELASLPLEHHVVQLGRIHKAELGYAV
KFLKPFLRLLKSEMNKYPQAQLKRKCTSISEQRPLYGPPKRIFAVDNTMSNGAMLLDAES
AFREPTPYDFVTPGNPFSSGQQIIVPGN
NT seq
6747 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgtttctaatttttcttctggttactcttggagcaaagacgtctacagcacag
agacctgcctctgaatctgcagatattgtccttttgatcgacagctctgatgcccttggg
agaagggcttttccatctgtgaaatccttcgttaacagaatcatcaacagcctcccaatt
ggcccaaacaggtatcgaattgcactcgtgcaatacagcgatgacgtgaaggttgaattc
cagctggatgactataaagcaaagaaccccatgctgaaccaactcaaaaaggtttcgttc
aaaggtggacctttgaggactgggaatgccatacgaagggtccacgagacgtttttcaga
agcccgagaaaagacaggagccagattgtggtggtcacaacttcagcgacgtcggatgat
cccgtggaagaagcagcaagccgattgaggcgggatggaataaaaataattgcattagga
atccaggaggcagtgcctcaagcgctgcagtcaatagctactcctccattccactataaa
tttggtacaccaagggatcttctagcgttttctcaaaacatgtctgaagttattggaaag
gcagcacaaatggagattttcacggccacgccaacgcctgcgcctccaagtgtgacagaa
agtgtcacaggaacctttggtcctgtatctccagaagctctgacgtgccataagaactca
gttgcagacatcgtatttatcgtggatgagggtgtttcacaggcgaacgctgaacatatc
agagaattcttgcagaacacagtaaactctctcgacgtgaaggaagcgtgcataaggatg
ggcatcgtgacgtacagcacggaggccaaagtattaacttctctgggagatgaaacgaag
aaaacagacattcttcagaaaattaggagcttttcccctaaagaagggaaatctcatttg
ggtgctgccattaatatgaccacaaaacgtgtttttgccgacaggagaaggagtgtagag
aaggtagccaccattatcacccacaggccctcggatgatgatataacaggggcagcttct
ctcattagcagggctggtgtgactgtctttgccatcggtgttgaaagagcagacaccgct
cagttgactcaggttgtgtcatatccgtcagaaccgaatattatcaaactgacagaattt
tctgacctgcccagacaggacaagacgtttcacaagaaactcttcaacaaaataaaatta
agactctatatccaacctgaaatgaaaaaacagatcaaatcaggatgtatggacacagaa
agggctgatatttattttctccttgatgattcgtcaagcattcatgtagaggagttcaag
aatatgacgtcttttgtgatggaagctattaagctgtttactataggacctgataatgtt
cgatttggagttgttcagtattcagaaaatactatcttaccaattagacttggtcagcac
accacccgcatcagtttagaaaaagaaatgaatcgtatcagacatagagcactactagaa
acaaatacaggagcagctataaatttcacacggccattgtttaaagacgcaagacaacag
tgtcgcggcaatgttccctgctatctcattgtgctgacggatgggaaagcacatgatgac
gtgaaggtagctgctcagctgctgagacaggcaaatgtcagcatttacgccattggagtg
aaaaatgccagcaaagaagagttgtttcatattgcgggctcaacgtcaagggtttacttt
gtgcaacagtttgaagccttggaagaaataaaaaatgttgttgttcgggatatatgcaat
gaaaaggcctgtgaggtgaggaaggttgatgtcatgttcctagtggacagctctggtagc
atacaccctgaggactttgcaaaaatgcagaacttcatggcagagtttgtgaaaaaatct
aacattggcccagaacaaatgtgcgttggtgctgtgcagttcagtggcacaaccaaagaa
aagttccccctcaataggtacttgacaaagaatgatatcattgacgctattgggagtatg
tctcttatcggagccaacacactcactggagaagcactggtatttatttccgattatttt
gaggctgccaaaggggcacgacctggcgcccacaaagttctcatcctgatcactgatggg
gaagcacaagatgaggtgaaaactccagccacagccctgagagataaaggcatcacaatc
tactcagttggtgtttttaatgccaataaaactcagctcgaagagatcagtgggaaacct
gagagggtgttttacgtggagaactttgatgttttgaataaggtacagaatgagctcagg
tttggtgtgtgcaaccctgaagaggagtgcaaaaggctagagcgtttggatatagtattt
gtaattgatagttctggcagcattggtcctaacaactataatctcatgaaaaacttcatg
attggcattgtgaataaatctgatgttggcaaggagcttgttcagttcggagctctcaaa
tattcagatgatccacacattctgtttgatctcgatgaccatagtacacaatcagcagtc
attgatgctatcaggagtgacacacatttagggggcaatacatacactgctgcggctctt
gagcattcaaaagctcttttcactgaggcaaggggcagccgcaaacacaggggcgtttcc
caaattcttatggtcataaccgatggtgaatcccacgataaagaaagacttgagaaagtg
tctaaaaaactcagggatgataaaattactatcttggccattgggataaaagaagccaaa
cttgatgaacttttgactatggctggatcagaagaaaacctgtattttgtggacacattt
gaaggactgcaaaacatatccaagaaattatcagataatctatgcaacaattcaaggcca
gaatgtgagatccaagctgatcttgttttcctgattgatggttccagaagtataccccca
aaagacttcgagaggatgaaggtcttcctgaaaaacctgcttgatttaattgattataat
gacaacgtgcgagttggtatggcccaatttgctgaccgatatgaagaagaatttggtctg
ggcgcttatcagaacaagccagaacttcaagaaaaaattattagcgttacaatgatgaaa
ggtggtaatacatacattggagaggctctcaaaggagtgaaggccttcttcaactccaca
agacgcagaatacctagacacatcgtcgtgcccaaattgctgctaatcacagatggagtc
tccgatgaccctgttgctgacagtgcaagagccctggctgccgatggtgtcgagattcac
gctattggagtgggaacggttgaccgggcaaaactcatggagataactgatgactctgac
aggatatactctgtggcgaatttcacagatctgccaagtattctaactcgcgtaactaaa
gaaatgtgtcaagataaaagtgaagcaatatgttttatggatgtcgttattggattcgac
atctcatctcagaaagcaggagaccatattttccatgagcagcaccttctggagacttat
ctccctgatattttgaaagactttacatcttatggggctgtgagttgcaacaaaggaaca
aaaacacagttcagtgtggcaaatctaatagaaaatacagacacaccttttctgcggaca
ctccaagttgaccatgaaaaaatcctagaggatctccggaaagttaggctgaacggccca
tcatatctcaatgtcgaattcctagacagcctttggaatgtatttgaaaatgtatctggt
aatcacatgcgaagccaggttttgcttgttttctccgatggcttggatgctgacaaagaa
gttcttaaaaagaaatcggaagaacttcgaaaaaagggactggatggaataataacagtt
gctctggaaggagttaccaactttgcagatcttctggatattgaatttggaaagggattt
ggatataacaagcaattaagtatgggtacgcaaaatattgccagcaggctgtttgccttt
gtgacacaaattgctgagagaacatgctgctgcaaattctgtacgtgtatgccagaggaa
gggccccgtggaccaaaagggaaaattggaacacagggatctactggtttgtccggccat
cacggatatacaggagaggatggcgagccaggttccagaggattccctgggccagaggga
ccccaaggctataggggagacccaggcagtcaaggaatgaaggggctacaaggccgaact
ggaagaaagggagagaaaggggatggtggaattgatggaactgagggagaagagggatca
catggactcccaggacacaaaggagaaaagggggatgcaggcctgcagggcagcccagga
ccaagtggacttcctggtggtgaaggtgagaaaggcttccagggagatcatggagattct
ggagaggataatgatgtagaaggagcaaaaggttacaaaggttcacaagggagcagggga
gaaaaaggatcacaaggttttacgggcgagaatggatctccaggaaacagtggaccagag
ggacgaagcggacttccaggcccaccggggacaaaaggaaaccgtggccccagaggtctg
gaaggaaaacaaggctttgaaggtcaacaggggacaagtggaattcctggtgtgaaagga
gagaaaggacattcgggaaacaaaggtcttccgggaaacttgggaatcccaggccctaaa
ggaaatcaagggaaacctggactaagaggaaatgaaggagaacctggggatactggaacg
aaaggaccagcaggcccccgtggtccacaaggaatgaggggagatgagggaattcctgga
tatggtgaggaaggaaagaaaggatcaaagggagaagaaggctttccaggagacattgga
ctgcagggcgaacatggagacccaggccttcctgggaaaccaggaccaaaaggcgctagg
ggaagaatgggtatcccaggattaaaaggtgaaccaggtggcccaggagcctggggtctt
ccaggacgtccgggtccaaaaggcgagaagggcctgtcctcattttcgccttgtgaactc
actgagtatctgcgtgaacacagcccttgttggaggggaacattggagtgcccggtatat
ccgacagacttagtatttgccttggatgcatctcaagacactacaccccagatatttgag
cagatgagagagatggtcatagcagttgtgaacaatacccaaataagggaaagcaactgc
ccagtgggagccagagtcgccgttgtgtgctacaactccgaaactcactatctaatccgc
ttctcggacttccacaataagcaacgtttgctggaggagatagctaagctttcttaccag
aggtcaaccaacagacgggacactggcacatccatgaggttcgtggccaggaatgttttc
aagagaactctcccaggtgctaacatgagaaaagttgctgtcttcttcagcaacggccca
tctgacaatggagattctctcagcaccgcagtcctggagttcagcgcctttgacatccac
ccagcggtcattgcttttaaaactatccctagcatccatcgtgcttttgcgctaggtgac
acaagactgtttcaagttattcaacctgggagagattatactctggccttacaaagactt
cagtcgtgtgtactttgctatgacaaatgcaaaccagatagctcttgcttccgcgctgaa
accccccgtgctcggggctatgtggacgccgctttcattttggaaaattcaaggaaaata
agcccggtggaatttcagaaactgaaagattttctaagcgcagcgctcgacagctttgac
atctctgctgaaccagagacctctttgacaggggacagggtggctgtactgagccatgct
cctctagaattcaggccccgcacccggaggagcccagtagagatcgagtttgactttttg
acttacggcagtaaactacgaatgaagagacacatccaggagtctatccagcagctaaat
ggagtggctgctctcggccatgccatacagtggaccgttagcaacatcttttctgaagca
cccaaccagagaaaatacaaggctatctttgttgtttctgttggagaaacaagtcgatgg
gacaaggaagtgctgagggatgcagctctgagagccaagtgcctgggctacgcactcttt
gtgctttcattaggagatgaatatgacgacgtggaaattgaagaactagcaagcctgccc
ctggaacatcacgtggtgcaacttggacgaattcacaaggctgaacttggatatgcagtg
aagtttctgaagccatttctacgcctccttaagagtgaaatgaacaagtatccacaagca
cagctcaagagaaaatgtacaagcattagtgaacaaaggcctctgtacggtccacccaaa
cgcatttttgctgttgacaacactatgtcaaatggagctatgcttctagatgccgaatct
gcttttcgggagccaacaccatatgatttcgtaacccctggaaatcccttcagcagtgga
cagcagatcattgtacctggaaattag
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integrated database retrieval system
