Petrimonas mucosa: ING2E5A_0268
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Entry
ING2E5A_0268 CDS
T04553
Symbol
cshA_1
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ING2E5A_0268 (cshA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmuc03019
]
ING2E5A_0268 (cshA_1)
03009 Ribosome biogenesis [BR:
pmuc03009
]
ING2E5A_0268 (cshA_1)
Enzymes [BR:
pmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ING2E5A_0268 (cshA_1)
Messenger RNA biogenesis [BR:
pmuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ING2E5A_0268 (cshA_1)
Ribosome biogenesis [BR:
pmuc03009
]
Prokaryotic type
rRNA helicases
ING2E5A_0268 (cshA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
SCM55347
UniProt:
A0A1G4G3J7
LinkDB
All DBs
Position
I:304776..306503
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AA seq
575 aa
AA seq
DB search
MRTFEELGIAPEIWRAIQEMGFEQPMPVQEEVIPQLLANTRDIIALAQTGTGKTAAFGLP
VIQKTDLDLHAPQTLILCPTRELCLQIAGDLTDFSKYVDDIKILPVYGGSSIESQIKALR
RGVHVIVATPGRLIDLINRKTVSLENVRTVVLDEADEMLHMGFTESIDEILSYVPNNRSM
LLFSATMPQEIAKITRKYMSNPMEITIGRKNEGAQNVKHIYFMVHAKDKYLALKRIVDYY
PNIYGIVFCRTRKETQEIADKLIQDGYDADSLHGDLSQAQRDYVMNKFRLRNLQLLIATD
VAARGLDVDDITHVINFGLPDDYEVYTHRSGRTGRAGKTGSSISIIHTKEKGKVSQIEKL
INKKFEYRQVPKGDLICEKQLFNFVDKIEKVKVQEEEIARLLPSVFKKLDWLEKEDIIKR
MVSLEFNRLIDYYQAADEIEEPREQGNRRDERGKGKKYDRGESGPKKAEKGYSRFFINIG
KVDGANPANLMGFINDYVPGKIRIGRIDLMKNFSFFEVPEESARQLLKSFKGVFVEDRKV
VVEPADSHTGEGKKNRGERSKADFAPSKKGKKRYY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttttgaagaacttgggattgccccggaaatttggcgtgcaatccaggagatg
ggttttgaacagcccatgcccgtgcaggaggaagtgattccgcaactgctggcaaatacc
cgtgatattattgctttggctcaaactggaaccggaaaaacagccgcttttggcctaccg
gtaatacagaaaacagacctcgatttacatgcaccacaaacgctgatcctttgccccacc
agggagctttgtctacagatcgcgggtgacctgaccgatttttccaaatatgttgacgat
ataaagattcttcccgtttatggcggatcaagcatcgaaagccagatcaaagctttgaga
cgtggagttcatgttatagttgccactcccggaagattgatcgatttgataaaccggaag
accgtttcacttgaaaacgtccggacagtagtactggatgaagcggacgaaatgctgcat
atgggatttactgaaagtatcgatgaaattttgtcttacgtccccaacaaccgcagcatg
ttgctcttttccgcaactatgccccaggagatagcaaagatcacacgcaagtatatgtca
aaccccatggagataaccatcgggagaaaaaacgagggggcacagaatgtgaagcatatc
tacttcatggttcatgcaaaagataaataccttgcactgaaacgtattgtagactactat
cccaatatttacggaattgttttttgccggacgagaaaagagacgcaagagattgcagac
aagctcattcaggatggttacgatgccgactcgttgcatggcgacttgtcgcaggcgcaa
cgcgattacgtcatgaacaaattccgcttgcggaacctgcagctgctgatcgcgaccgac
gtggcagcccgtggtctggatgtggacgacatcacccatgtaatcaatttcggactgcct
gacgattacgaagtatatacacaccgtagcggtcgcacaggcagagcagggaaaaccggt
agttccatctccattatccacaccaaggagaaaggcaaggtaagccagattgagaagctt
atcaataaaaagtttgaatatcgccaggtacccaaaggggatctcatctgcgaaaagcag
ctgttcaactttgtggataaaattgagaaggtaaaggttcaggaggaagagattgcccgt
ttgttgccttcggtattcaaaaaactcgactggctggaaaaggaggatattatcaaacgg
atggtttcgctcgagtttaaccggttgatcgactattaccaggctgcagacgagatcgaa
gagcctagggagcagggcaataggagagatgagcgcggcaaaggcaaaaagtatgacaga
ggcgagtctggtccgaaaaaggcagaaaagggctactcccgtttttttatcaatattgga
aaggtggatggagccaatccggctaacctgatgggttttatcaatgattatgtacccggg
aagatcaggataggacgaatcgacctgatgaagaacttttcgttttttgaagttcccgaa
gagagtgcaaggcaactcctcaaatctttcaagggtgtatttgtggaagatagaaaggta
gtggttgaaccggctgacagtcacacaggggaaggcaaaaaaaataggggagagaggtcg
aaagcggatttcgctccttccaaaaaagggaaaaagcgatactattga
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