Petrimonas mucosa: ING2E5A_0965
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Entry
ING2E5A_0965 CDS
T04553
Symbol
cshA_3
Name
(GenBank) ATP-dependent RNA helicase CshA
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ING2E5A_0965 (cshA_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmuc03019
]
ING2E5A_0965 (cshA_3)
Enzymes [BR:
pmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ING2E5A_0965 (cshA_3)
Messenger RNA biogenesis [BR:
pmuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ING2E5A_0965 (cshA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
SNF2-rel_dom
Cas3-like_C_2
AAA_19
KH_PARP14_6
AAA_7
Tuberin
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-ProteinID:
SCM56617
UniProt:
A0A1G4G5J5
LinkDB
All DBs
Position
I:complement(1162633..1163955)
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AA seq
440 aa
AA seq
DB search
MLFTELPLCDNLLDGLQAMNFKETTPIQEQAIPVILEHKDVIACAQTGTGKTAAFLLPLL
NNLLTEPHEANKVNAIIMAPTRELAQQIDQQMEGFSYFTPFSSVAVYGGNDGDAWEVQKR
GLLSGADVVIATPGRLLSHINLYNIDFSGVKYFILDEADRMLDMGFYDDIMKIEKLLPKD
RQTIMFSATMPPKIQQLAKTILRNPVEITIAVARPPETILQTAYICYEAQKIEIVKQLFS
EKKPNKVILFSGKKQKVKEIAKTLQKMGLSADAMHSDLEQSERNSVMHEFRNERVNILVA
TDIVSRGIDIDDITLVINFDVPHDVEDYVHRIGRTARAGDSGMAITFVSPEEQFRFSKIE
RFLKKTIYKIPVPPELGEVPEYNPEQQRKEGRRRSDKPSKNKGNKGKEKKHAQPSGEKKG
KKTSSKRKQSRPNKKDQTGS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgttatttaccgaacttccgctgtgcgataacctgctggatgggttacaggcaatgaac
ttcaaagagactacacccatccaggaacaagccataccggttattctagaacataaagat
gtgatcgcctgtgcacagacagggacaggtaaaactgcagctttcctgctcccactgctg
aacaacctactaaccgaaccgcacgaagccaacaaggtaaatgccatcatcatggctcct
accagagagttggcgcaacagatcgaccaacagatggagggcttctcctattttaccccc
ttctcatcggtagccgtttacggaggcaatgatggggatgcctgggaggtacagaagaga
ggattgcttagcggggccgatgtggtgatcgccacacctggtaggctgctttcacatatc
aacctctacaacatcgatttttccggggtgaagtattttattctggacgaggcagaccgg
atgctcgacatgggattctacgacgacatcatgaagattgagaaattgctgccgaaagat
aggcagacaatcatgttttcagctacgatgccgccaaagatccagcaactggccaagact
atcctgcgaaatcccgtggagatcaccattgcagtagctcgtccgccagagaccatttta
cagacggcctatatctgttacgaagcacaaaagatcgagatcgtcaaacaactcttctcg
gagaagaaacccaacaaggtgatccttttctccggaaagaaacagaaggtaaaagagatt
gccaagacactccagaagatggggctgtcggccgacgccatgcattccgacctggaacag
tctgagcgaaactcagtaatgcacgaattccggaatgaaagggtaaatatcctggtggct
accgatattgtctcgaggggaatcgatattgacgacatcacgctcgtcataaacttcgat
gtaccccacgacgtggaggattatgtccaccgtatcggacgaacggcacgcgcaggcgat
tccgggatggcaataacatttgtatcgcccgaggaacagttccgcttctccaaaattgag
cggttcctgaaaaagacgatctacaaaattcctgttcctcctgagttgggggaggttccc
gaatacaatcccgaacaacagcgcaaggaggggaggagacggagcgacaagccttcaaaa
aacaagggaaacaaggggaaagagaagaaacatgcccaaccgtcgggagagaaaaaaggg
aaaaaaacctcttcaaagagaaaacaaagccggcccaacaagaaagatcagaccggctcc
tga
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