Petrimonas mucosa: ING2E5A_1326
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Entry
ING2E5A_1326 CDS
T04553
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03030
DNA replication
pmuc03430
Mismatch repair
pmuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ING2E5A_1326 (holB)
03430 Mismatch repair
ING2E5A_1326 (holB)
03440 Homologous recombination
ING2E5A_1326 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmuc03032
]
ING2E5A_1326 (holB)
03400 DNA repair and recombination proteins [BR:
pmuc03400
]
ING2E5A_1326 (holB)
Enzymes [BR:
pmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ING2E5A_1326 (holB)
DNA replication proteins [BR:
pmuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ING2E5A_1326 (holB)
DNA repair and recombination proteins [BR:
pmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ING2E5A_1326 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
SCM57414
UniProt:
A0A1G4G6M3
LinkDB
All DBs
Position
I:1591823..1592932
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AA seq
369 aa
AA seq
DB search
MYFRDIIGLHDVKKHLIESVQRGFIPHARLFHGPEGVGKLPLAIAYARYLNCEKRGEEDS
CGECASCRKFDKLMHPDLHFVFPVVKSKVSDEYLPEWREFLNGQTYFGLNDWLNFIHAEN
AQGTIYSKESDEIIRKLSLKVYEAPYKIMVIWLPEKMHDACANKLLKLIEEPPENTLFLL
VSEDLEQVLLTIRSRCQLLNIRAVEPEEMVASLQAVHGLQETEARQVAHIANGSYAKAVS
IIKAADDNNYFFSLFKEMMRASVSRNIKAIKSVAGELAAIGREMQKSYLLYCLRLFREYF
ISNLNEPELIYLREEEKGFGDRFAPFINAGNIQSFDDEFQLAYRQIEQNGNARIIFLDLC
LKSTMLLKK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcgcgacatcataggtcttcacgatgttaagaaacacctgatagaatcggta
cagcggggtttcattccacatgcccggctgtttcacggtccggagggtgtgggaaaattg
ccactggcaattgcatatgcccgttacctcaattgtgagaaaaggggggaagaagattcc
tgcggtgagtgtgcctcatgcagaaagttcgacaagctgatgcatcccgacctgcacttt
gtctttccggtggttaaatcgaaagtgagcgatgagtacttgcccgaatggcgcgagttc
ttgaacgggcagacctatttcggtctgaacgactggctcaatttcatccatgccgagaat
gcacagggaaccatctattcgaaagagagcgatgaaattatccgcaaattgagtctgaag
gtttacgaggctccttacaagataatggtgatatggctgcccgaaaagatgcacgatgcc
tgtgccaacaagttgctgaaactgatcgaggaaccgcctgaaaacaccctgtttctgctg
gtctccgaagatctggaacaggtgttgctcaccatccggtcgcgttgccagctgctcaat
atccgtgcggtagagccagaggagatggtcgcttcccttcaggcggttcacggcctgcag
gagacggaggctcgacaggtggcccacattgcaaacggaagctatgcaaaagctgtgagc
atcatcaaggccgccgacgacaacaattatttcttttcgttgtttaaggagatgatgcgg
gcgtcggtatcgagaaacatcaaggcaatcaagtcggttgccggcgagctggccgctatc
ggcagggagatgcagaaaagctatctgctctattgcctccgcctcttccgcgagtatttc
atcagcaacctgaacgagccggaactgatctatctccgcgaagaggagaagggtttcggc
gaccgttttgccccgtttatcaatgccgggaatatccagtcgtttgacgatgagtttcag
ctcgcttaccggcagatagaacagaatggaaacgccaggattattttcctggatctatgt
ttaaaaagcaccatgctcttgaaaaaatag
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