Petrimonas mucosa: ING2E5A_2441
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Entry
ING2E5A_2441 CDS
T04553
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ING2E5A_2441 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuc03021
]
ING2E5A_2441 (rpoB)
03400 DNA repair and recombination proteins [BR:
pmuc03400
]
ING2E5A_2441 (rpoB)
Enzymes [BR:
pmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ING2E5A_2441 (rpoB)
Transcription machinery [BR:
pmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ING2E5A_2441 (rpoB)
DNA repair and recombination proteins [BR:
pmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ING2E5A_2441 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
Pept_S41_N_bact
Motif
Other DBs
NCBI-ProteinID:
SCM59238
UniProt:
A0A1G4G9R9
LinkDB
All DBs
Position
I:2937855..2941667
Genome browser
AA seq
1270 aa
AA seq
DB search
MSSNNTNQRINFASIKNPLDFPDFLEIQLKSFQDFLQLDAPPESRKNEGLYKVFTENFPI
ADTRNNFVLEFLDYFVDPPRYTIEECIDRGLTYSVPLKAKLYLYCTDPDHEDFAPVIQDV
YLGTIPYMTDKGTFIINGAERVIVSQLHRSPGVFFGQSVHANGTLLYSARIIPFKGSWIE
FATDINNVMYAYIDRKKKLPVTTLLRSIGFESDKDILEIFDLAEEVKVSKANLKKVIGRK
LAARVLKSWMEDFVDEDTGEVTSIERNEVIIERETILDQEHIDDILESGVSSILLHKETP
NSSDYSIIYNTLQKDPSNTEIDAIRHIYRQLRSAEPADDASAREVINNLFFSEKRYDLGD
VGRYRMNKKLGLNIDENIRVLTKEDIIEIIKYLIELVNSKAVVDDIDHLSNRRVRTVGEQ
LYSQFGVGLNRMARIIRERMNVRDNEVFTPIDLINAKTISSVINTFFGTHALSQFMDQTN
PLAEITNKRRLSALGPGGLSRERAGFEVRDVHYTHYGRLCPIETPEGPNIGLISSLCVYA
KINDLGFIETPYRKVENGVVNTNNDEVVYLSAEEEENKVVAQGNAPLNEKGEFILPRVKA
RLEADYPVVAPEEVDLMDVSPMQIASIAASLIPFLEHDDANRALMGSNMMRQAVPLIKSE
APIVATGIEGRLVKDSRTQLMAEGDGEVIYVDATTIKIKYNRTEEEEFTSFEDAVKTYSI
PKFRKTNQNTTIDLRPICRVGQKVTKGDILTEGFATENGELALGRNLKVAFMPWKGYNFE
DAIVLNERLVSEDIFTSVHVEEFSLEVRETKRGLEELTSDIPNVSEEATKDLDEHGIIRV
GARVKPGDILIGKITPKGESDPSPEEKLLRAIFGDKAGDVKDASLKASPSLKGVVINTNL
FSKAAKKGKSKLSNKALLPKLDEEYENKMEELRKLLIDKLLHLTEGKTSAGVKDYTNMDI
VPKGARFTHKVLADIDYQSVQLSKWTNDAHKNQLIRTTVINYLRKHKELDAELKRKRFDL
TIGDELPSGIMQIAKVYVAKKRKIQVGDKMAGRHGNKGIVSKIVRAEDMPFLADGTPVDI
VLNPLGVPSRMNLGQIFETVLGWAGQELGVKFATPIFDGASLEDLNEWTDKAGIPRYGKT
YLYDGGTGERFDQPATVGVIYMLKLGHMVEDKMHARSIGPYSLITQQPLGGKAQFGGQRF
GEMEVWALEAFGASHILQEILTIKSDDVVGRSKAYEAIVKGEPMPQPGIPESLNVLLHEL
KGLGLSVELD
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaataacaccaaccaacgaatcaattttgcgtcgataaaaaacccgcttgat
tttcctgattttctggagattcagctcaaatcgtttcaagattttttgcagctcgacgcc
ccccccgaaagcagaaaaaatgaaggattgtataaggttttcacggagaatttccccatt
gcggatacccggaacaacttcgtccttgaatttctagattattttgttgatccgccacgc
tacactatcgaggagtgtatagacagagggcttacctacagtgttccgctgaaggctaaa
ctttacctctactgtaccgaccccgatcacgaagattttgcacccgttattcaggacgtt
tatttggggaccattccatacatgaccgacaagggcacctttatcatcaacggagcagaa
agggttatcgtttcacagctgcaccgttcgcccggtgtatttttcggtcagagtgtacac
gccaacggaactctcctctattctgccaggattataccgttcaaaggttcatggattgag
tttgctacggacatcaacaacgtgatgtatgcctacatagacaggaagaagaaactgccc
gtaaccacattgcttcgttctatcggttttgaaagcgacaaggatatcctagaaatcttc
gaccttgccgaagaggtgaaagtaagcaaagccaacctgaaaaaagtcatcggcagaaaa
ttggcagcccgcgtgctgaaatcgtggatggaagacttcgtggatgaagacaccggcgaa
gtaacctccatcgagcgtaatgaagtgattattgaacgggaaaccattttggaccaggaa
catatcgatgacatcctcgaatcgggtgtatcctccatcctgctacataaggagactccc
aattcgtctgattactctatcatatataacacgctccaaaaagaccccagcaacacggag
atcgatgccatccggcacatctaccgtcagcttcgcagtgctgaaccggcagacgacgcc
agcgcccgcgaagtgatcaacaacctcttcttttcagagaaaaggtacgaccttggggat
gttgggcgttacagaatgaacaagaaactgggtctcaatatcgacgaaaatattcgtgtc
ttgacgaaagaagacatcattgagatcatcaaataccttatcgaactggttaactccaaa
gctgtggtggatgatatcgaccacctgagcaaccggcgtgtccgcaccgtcggggagcaa
ctctactcccaattcggcgtcggattgaaccgtatggcccgtatcatccgtgaaaggatg
aacgtgcgcgacaatgaggtcttcaccccgatcgacctgatcaatgcgaagaccatctcc
tcggttatcaacaccttcttcggcacccatgcactctctcagttcatggaccagaccaat
ccgctggcggagataaccaacaagcgtcgtctctctgcattgggacctggcggtctctct
cgcgaacgtgccggtttcgaggtgcgcgacgtacactatacgcactacggacgtctctgt
ccgattgaaacaccggaaggacccaatatcggtctgatctcctcgctttgcgtctatgcc
aagatcaacgatctaggttttatcgagacaccctaccgcaaagttgagaacggcgtggta
aacaccaacaacgacgaagtggtttacctttcggccgaagaggaggaaaacaaagtggtt
gcacagggaaatgctccgctgaatgagaaaggagaatttatcctgccacgcgtcaaggcg
aggttggaggcagactacccggtggttgcacccgaagaggtggacctgatggatgtctcg
cccatgcagattgcctccatcgccgcgtcactgattccgttcctcgagcacgatgacgca
aaccgtgcgctgatgggatcgaacatgatgcgccaggcggtaccgcttatcaaaagtgag
gcgccaatcgtagccaccggaattgaaggccggctggtgaaggattcacgcacacagctg
atggctgaaggtgacggagaggttatctacgtggatgccaccaccatcaagattaaatac
aacaggacggaagaagaggagtttaccagttttgaggatgccgtcaagacctactccatt
ccgaagttcagaaagaccaaccagaacaccaccatcgacctgcgtccgatctgcagggtg
ggacaaaaggttaccaaaggagatatcctcaccgaaggttttgccaccgaaaatggcgaa
ctggcattgggccgcaacctgaaagtggcattcatgccctggaagggttacaacttcgag
gatgcgattgttctgaatgaaaggttggtaagtgaagacatatttacctcggttcacgta
gaggagttctcgctcgaagtacgtgagaccaaacgcgggttggaagagcttacttccgat
atacccaacgtaagtgaagaggctaccaaggatctggatgaacacggtatcatccgcgtg
ggagcacgtgtgaaaccgggcgacatcctgatcggaaagattacgccgaaaggggaatcc
gacccatcacccgaagaaaaactgcttcgcgccatctttggcgacaaggcaggcgacgtg
aaagatgcttctctaaaagcttcgccatcacttaagggtgtggttatcaatacgaacctg
ttctcaaaagccgctaagaaaggcaaaagcaagttgtcgaacaaagcgcttcttcccaaa
ctcgacgaagagtatgagaacaagatggaagaactgagaaagttgcttatcgataaactc
ctgcacctgaccgaaggcaagacgtctgccggcgtcaaggattataccaatatggatatt
gttccgaaaggggccagatttacccataaggtgcttgctgacatcgattaccagtcggtc
cagctgagcaagtggaccaacgatgcacacaagaaccagttgatccgtaccacggttatc
aactaccttcgcaagcacaaggagctggatgccgaacttaaacggaaacgtttcgacctg
accatcggtgacgagcttccctccggaatcatgcagatcgccaaggtctacgtggccaag
aaacggaagatccaggtgggagacaagatggccggacgccacggtaacaagggtatcgta
tcgaagattgtccgtgccgaggatatgccattcctggccgacggtacaccggttgacatc
gtgttgaaccctctgggtgtaccttcacgtatgaacctggggcagatttttgaaactgtt
ctcggttgggcaggacaggaactcggtgttaaattcgcaacccccattttcgacggtgcc
tcgctggaagacctgaatgaatggaccgacaaggctggtatcccccgttacggaaaaacc
tacctctatgacggcggcaccggcgaacgtttcgaccagccggctaccgtaggagtcatc
tatatgctgaaactaggacacatggtggaagacaagatgcacgcacgttccatcggacca
tactcgctcatcacgcagcaaccgctcggtggtaaagcccagtttggtggacaacgtttc
ggagagatggaagtatgggcgctcgaggcattcggcgcatctcatattctgcaggagatt
ctgaccatcaaatcggacgacgttgtaggacggtccaaagcttacgaagctatcgtgaag
ggtgaaccgatgccgcaacccggcatccccgaatctttgaacgtattgctgcatgagctt
aaaggattgggattgagcgtagaacttgattaa
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integrated database retrieval system
