Petrimonas mucosa: ING2E5A_2442
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Entry
ING2E5A_2442 CDS
T04553
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ING2E5A_2442 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmuc03021
]
ING2E5A_2442 (rpoC)
03400 DNA repair and recombination proteins [BR:
pmuc03400
]
ING2E5A_2442 (rpoC)
Enzymes [BR:
pmuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ING2E5A_2442 (rpoC)
Transcription machinery [BR:
pmuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ING2E5A_2442 (rpoC)
DNA repair and recombination proteins [BR:
pmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ING2E5A_2442 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
SCM59239
UniProt:
A0A1G4G9L1
LinkDB
All DBs
Position
I:2941693..2945976
Genome browser
AA seq
1427 aa
AA seq
DB search
MAFRKENKIKSNFSKITISLASPEQILESSFGEVLKPETINYRTYKPERDGLFCERIFGP
VKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERTGHIHLVVPVAHIWYFRSLPNKI
GYLLGIPTKKLDSIIYYERYVVIQPGVLEDKVAEKDLLSEEEYLNLLDTLPKDNHLLEDS
DPNKFIAKMGAEAILDMLERINLDKLANQLRHRANTDSSQQRKNEALKQLQVVEAFRASK
NVNKPEWMIMKVIPVIPPDLRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIKAPD
VILRNEKRMLQEAVDSLFDNSRKSSAIKTDSNRPLKSLSDSLKGKQGRFRQNLLGKRVDY
SARSVIVVGPELKMHECGLPKDMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVVY
DILEYVMKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLSCTAFNADFDGDQMAVH
LPLGNEAILEAQVLMLASHNILNPANGAPITVPSQDMVLGLYYITKIRPEAKGEGMTFYG
EEEAIIAYNEGKVDIHALVNVVVDDIDENGNPIRKMHQTTVGRVITNEYIPKEVGYINEL
LSKKSLRDIIGKVIKTCGVARTAQYLDDIKDLGYKMAFKGGLSFNLEDVIIPKEKEELIQ
QGYAEVEQIMENYNMGFITYNERYNQIIDTWTHINSKLSNILMKQLAEDDKGFNSVYMML
DSGARGSREQIRQLSGMRGLMAKPQKSGAEGAQIIENPILSNFKEGLSVLEYFISTHGAR
KGLADTALKTADAGYLTRRLVDVSQDVIITEVDCGTLRGLAATAIKNNDEVIASLYERIL
GRVSVHDVPHPTTGEILVSAGEEITEEIAEKIDKSPIERVEIRSVLTCESRHGVCAKCYG
RNLATGQMVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGIASNIAAENRIITKYDGILEF
DELRYVESQDAEGKPYKVVVSRLVEMRIIDPNTKIVLLSHNIPYGSKLYYNDNDKVKKGD
LICEWDPFNAVIISEATGRIKFENFLEGITYKVESDEQTGLKEKVIIESRDKTKAPSAHI
VNENDDILRTYTLPLGAHIVKNENDEIRVGDVLVKIPRAVGKSGDITGGLPRVTELFEAR
NPSNPAVVSEIDGEVSFGKIKRGNQEISVTSKTGEVKKYLVPLSKQILVQENDFVRAGMP
LSDGAITPADILAIMGPTAVQEYIVNEVQDVYRLQGVKINDKHFEVIVRQMMRKVEVVEP
GDTRFLEQQLVDKHEMMEENDRIWGKKVIVDPGDSQIFEPGQIVTVRKLRDENSSLKRRD
LRLVEARDAIPATANQVLQGITRAALQTTSFMSAASFQETTKVLNDAAINGKVDTLEGLK
ENVICGHLIPAGTGLREYDKIIVGSKEDFDKMNVGRRSSLYQEVEEA
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcatttagaaaagaaaacaagataaagagtaacttttcaaaaataaccatcagtttg
gcatctcccgaacaaatactggaaagttcattcggcgaagtgttgaaacctgagaccatc
aactaccgcacctataaaccggagcgcgacggtttgttctgcgaacgcatctttggtccc
gtaaaggactatgaatgccactgcggcaaatacaaacggatccgctacaaggggatcgtc
tgcgaccgttgcggtgttgaggttactgaaaagaaagtacgccgtgaacgtaccggacat
atccacctggttgtccccgtggcccatatctggtatttcaggtcattacccaacaagata
ggttatctgttgggtattcctaccaagaagctggactccatcatctattacgagaggtat
gtagtgattcagccgggcgtgctcgaagacaaagtggcagagaaggatctgctaagcgaa
gaggagtatctcaaccttctggatacgctcccgaaggacaatcacctgttggaggacagc
gaccccaacaagttcattgccaagatgggagccgaggctatcctggatatgctggaacgg
atcaatctcgacaagctggccaaccagttgcgtcacagggctaacaccgattcatctcag
caacgcaagaatgaggcattgaaacagcttcaggttgtagaggccttcagggcatccaag
aatgtgaacaagcctgaatggatgatcatgaaggtgattccggtgattcctcccgatctg
cggccattggttccattggatggcggacgttttgccacatccgacctgaacgatctttac
cgtagggtcatcatcagaaataaccgtctgaagaggctgatcgatatcaaggctcccgat
gtgattctgcgcaacgagaagcgcatgttgcaggaggcggtagactcgctgttcgacaac
tcgcgcaaatcgagcgccatcaagaccgactcgaaccgtccgctgaaatcgctttcagac
agtctgaaaggcaaacagggacgtttccgtcagaaccttctcggtaaacgtgtagactac
tctgcccgttcggtcatcgttgtcggtcccgagctgaagatgcacgagtgcggtctgccc
aaggatatggctgccgaactctacaagccgttcatcatccgcaagcttatcgagcgggga
atcgtgaagacggttaaatcggccaagaagattgtcgaccggaaagaaccggttgtatac
gatattctggagtacgtgatgaagggacaccccgtcctgctgaaccgtgcccctacactg
caccgtctgggtatccaggcgttccagcccaagctgatcgaaggcaaggccatccagctt
cacccgctatcctgtacggcattcaacgccgacttcgatggtgaccagatggccgttcac
ttgccgctgggcaatgaagccattttggaggcacaggtgctgatgctcgcatctcacaat
atcctcaaccccgcaaacggcgctcccatcaccgttccgtcgcaagacatggtactggga
ttgtactacatcaccaagatccgcccggaagccaagggagaggggatgaccttctacggc
gaagaggaggccatcattgcttataatgaaggtaaagtagatattcatgcgctggtaaac
gttgtggtcgacgatatcgacgaaaacggcaacccgatccgcaagatgcaccagaccacc
gtcggtcgtgtaatcaccaacgagtacattccgaaggaggtgggatatatcaacgaactg
ctctcgaagaaatcgctccgcgacatcatcggaaaagtgatcaagacttgcggtgtggca
cgtactgcccaatacctcgacgacatcaaggacctcggttacaagatggcgttcaaggga
ggcctctcgttcaacctcgaggatgtgatcatccccaaggagaaggaggagctgatccag
caaggttatgccgaagtggagcagatcatggagaactacaacatggggttcatcacctac
aacgagcgttacaatcagatcatcgatacatggacccatatcaactccaagttgtctaac
atcctgatgaaacagcttgccgaggacgacaagggtttcaactccgtctacatgatgctc
gattctggagcccgtggatcgcgtgaacagatccgccagctttccggtatgcgtggtctt
atggccaaaccgcagaagagtggagccgaaggggcacagatcatcgaaaaccccattctt
tcgaacttcaaggagggactttcggtgttggagtacttcatctctacgcacggtgcccgc
aagggtcttgccgacacggctttgaagactgccgatgccggttatctgacccgccgtctg
gtagacgtttcacaagatgtgatcatcaccgaagtggactgcggcacattgcgcggtctg
gctgccacggccatcaagaacaacgatgaagttatcgcttcgctttacgagcgtattctt
ggacgtgtctccgtacacgatgtcccccaccccactaccggcgaaattctggtcagtgca
ggtgaggagatcacggaagagattgccgagaagattgacaagtcgcccatcgaacgggtc
gagatacgttcggtactcacctgcgaatcgcgtcacggtgtctgtgcaaagtgttacgga
cgcaacctggctaccggccagatggtacagaaaggtgaggcggtgggtgttatcgccgcc
cagtcgatcggtgagccgggtacacagctgactctccggacattccacgtgggtggtatc
gcctccaacatcgccgccgaaaaccggatcatcaccaaatacgacggtatcctggaattt
gacgagcttcgttacgtggagagtcaggatgctgaaggcaaaccctacaaggtggtggta
agccgtctggttgaaatgagaattatcgatcccaacaccaagatcgtgttgctttctcac
aatatcccctacggctccaaactctattacaacgacaacgacaaggtaaagaagggcgat
ctgatctgcgaatgggacccgttcaatgcggtaatcatttcggaggcaaccggtcggatc
aagttcgagaacttcctggaaggtatcacctacaaggtggaatcggacgagcagaccggt
ctgaaggagaaggtgatcatcgagtcgcgtgacaagaccaaagctccatcggcccatatt
gtaaacgagaacgacgatattctccgcacctacacgctaccacttggtgcccacatcgta
aagaatgaaaacgacgagatcagggtgggcgacgtactggtgaagattccgcgtgccgtc
ggcaaatcgggcgacatcaccggaggtcttccgcgcgttaccgaactgtttgaggcgcgc
aacccgtccaaccctgcagttgtatctgaaattgacggtgaggtatcgtttggaaaaatc
aaacgtggaaaccaggagatctccgttacatccaaaacgggtgaggtaaagaaatacctc
gttccgctgtcgaaacagattcttgtgcaggagaacgactttgttcgtgccggcatgccc
ctgtcggacggagccatcactccggccgatatcctggcgatcatgggtcccacggcagtt
caggaatatatcgtgaacgaagtacaggacgtatatcgcctgcagggtgtgaagatcaac
gacaagcacttcgaggtgattgtccgtcagatgatgcgcaaggttgaggtggttgagccg
ggagatacccgtttcctcgaacagcaacttgtcgacaagcacgagatgatggaagagaac
gaccgcatctggggcaagaaggtgatcgtcgatccgggagattcccagattttcgaaccg
ggacagattgtaactgtccgcaaactgcgcgatgagaacagttcgctgaaacggcgcgac
ctgcgactggtggaagcacgtgatgccattcccgcaacggccaaccaggtattgcagggt
atcacccgtgctgcactgcagactaccagcttcatgtcggccgcctcgttccaggaaacc
accaaggtgttgaacgatgccgccatcaatggaaaggtagacacgctggaggggttgaag
gagaacgtgatttgcggacacctgatacctgccggaacaggtctgcgcgaatacgacaag
atcatcgtaggttcaaaggaggatttcgacaagatgaatgtcggcagacgttcatccctc
tatcaggaagtagaagaggcgtaa
DBGET
integrated database retrieval system
