Petrimonas mucosa: ING2E5A_2467
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Entry
ING2E5A_2467 CDS
T04553
Symbol
mfd
Name
(GenBank) Transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ING2E5A_2467 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmuc03400
]
ING2E5A_2467 (mfd)
Enzymes [BR:
pmuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ING2E5A_2467 (mfd)
DNA repair and recombination proteins [BR:
pmuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ING2E5A_2467 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
TRCF
UvrB_inter
CarD_TRCF_RID
ResIII
Cas3-like_C_2
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
SCM59264
UniProt:
A0A1G4G9P1
LinkDB
All DBs
Position
I:2984529..2987858
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AA seq
1109 aa
AA seq
DB search
MMVSDISQLLRILEAHPNMAAANKLLKEVKTLSAKGLHGSSRALFAATVFNRQPRTALYI
LNDLETAGYFYHDVMQVLGTKDVLFFPSAYKRAAKYGQIDPANEILRTEVLSRLQNNASA
LFIVSYPDALAERTVSQETLQENTLSISVGEQVDSRFVSEVLESYGFTLVDYVYEPGQYA
TRGSILDVFSFSNELPYRIDFFGDEVETIRSFEVESQLSVEKFSEIRIVPEFGRSKHKNA
SLFDSLPSETVIGIEDIRWIESRVESICNDELHIDLSNEELVKADLLTKEEFLSSIEPFT
HLRFDTKLTDTPDAVLQFQTTPQPLFQKNFDLISDSLKDFLLSGYTLYILSDSEKQHQRL
RTIFQDRGDEIPFIPINKTLHEGFSDETLKICCFTDHQIFNRFHKYNLKSDKARSGKIAL
TLKELNQLQQGDYVVHLDHGIGKFAGLVRLRIGETVQEVIKLTYLNNDSVFVSIHSLHKI
SKYKGKEGESPQLNKLGSGAWERTKERTKTKIKDIARDLIKLYAQRQSEKGFAFSRDTYL
QTELEASFMYEDTPDQLKATQEIKQDMESDHPMDRLVCGDVGFGKTEVAVRAAFKAATDG
KQTAVLVPTTVLATQHYKTFSGRLSGFPVKVDYLSRARSPKEQKQILSDLKEGKIDIIIG
THRLVGKDVQFKDLGLLIIDEEQKFGVSTKEKLKQLKSNIDTLTMSATPIPRTLQFSLMG
SRDFSTINTPPPNRYPVQTEVHTFDVEVMKEAINYEISRNGQVFIVNNRIQNIYEMEALL
RREIKDIRIAVGHGQMDPKKLETIIADFLNHEYDVLLATTIIESGIDMPNVNTIIVINAQ
NFGLSDLHQLRGRVGRSNRKAFCYLMAPPLYTLSNDSRRRLQAIENFSELGSGIHIAMQD
LDIRGAGNLLGAEQSGFIADLGYETYQKILAEAVQELRKEEFTELYRQQQELKAEREENF
VDEVTVESDLELMFPVSYIPNDAERVAIYRELDNMETETQILDFTKRLEDRFGKIPAQGK
ELIRIVRLRRLAKSLGIEKIFLKSGQMTLFLISDVESPYYRSSVFDRLLNFIQTHPRDCL
LREAGKKRSVTIRNVTTVEAAVALIESIH
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgatggtatcagacatctcccaattgctccggatccttgaggctcaccccaacatggcg
gcggcaaacaaactgctgaaagaggtaaaaacactttcggcaaagggtttgcatggctca
tcccgtgcacttttcgctgccaccgttttcaacaggcaaccacgaactgccctatatatc
ctcaacgatctggaaacagccggatatttctatcacgatgtgatgcaggtgctgggaacc
aaggatgtacttttcttcccgtcagcctacaagcgtgcggcaaaatatggtcagatcgac
ccggcaaacgagattcttcgcaccgaggtattgagccggctgcaaaacaatgcttctgcg
ctgttcattgtctcctatcccgatgcgctggctgaaagaacggtttcgcaggagacactg
caagaaaacaccctgagcatatcggtaggtgaacaggtagactcccggttcgtatcggag
gtgttggagtcatacgggttcactcttgttgattacgtgtatgaacctggacaatatgcc
acgcggggtagtatcctggacgtattttcattttcgaacgaactgccttaccgtatcgat
ttcttcggagatgaagtggagacaatccgcagttttgaggtggaaagtcagctctccgtg
gagaaattttcagaaatccgtatcgttccagagttcggcaggagtaaacacaaaaatgca
tcgctattcgattcgcttccatcggaaacggttattggtatcgaagatatccgctggatt
gaaagtcgggttgaaagtatctgcaacgacgagttgcacatcgatctcagtaacgaagag
ctggttaaggccgatctgcttacgaaagaggagtttctctcatccattgaaccattcaca
cacctgcgcttcgacacaaaactgaccgacacacccgacgccgtgctgcagtttcaaacc
acacctcaacccctgtttcagaagaacttcgatcttatctccgattcgctcaaggatttc
ctgctgagtggctatacgctatatatcctcagcgacagcgaaaaacagcatcagcgactc
aggactatctttcaggacaggggagacgagatcccattcattcccataaataagacactc
catgagggtttttccgacgagacactgaagatctgctgctttaccgatcaccagatcttc
aaccgtttccacaaatataacttgaagtcggacaaagcccgctccggaaagattgccctc
acgctgaaggagcttaaccagcttcaacaaggcgactacgtggttcatctcgaccacggg
atcggcaagtttgcgggactggtccggctccggatcggtgaaacggtgcaggaggtcatc
aagctgacctatctcaataacgactcggtcttcgtttcgatccactccctccacaaaata
tccaaatacaagggaaaagagggagaatcgccacaactgaacaaattgggttcaggtgca
tgggaacggacaaaagagaggacaaaaaccaagataaaggacattgcacgcgacctgatc
aagctttatgcccagcgccagagcgaaaagggttttgcattttcaagagacacctatctg
cagaccgaactggaggcctctttcatgtatgaagacacacccgatcagctcaaagccacg
caagagatcaagcaggatatggagagcgatcacccgatggacaggctggtatgtggagat
gtgggattcgggaaaacagaggtggccgtacgggccgcattcaaagcggccaccgacggc
aagcagacggccgtactggttccaaccaccgtgctggctacccagcactacaagacattc
agcggtcgactctccggttttccggtcaaagtggactacctgagccgtgcccgctcgcca
aaagagcagaagcagatcctctccgatctgaaggagggtaaaatcgacatcatcatcggc
acccaccggctggtgggaaaagatgtccagttcaaagatctgggattgctgattatcgat
gaggaacagaaattcggcgtctccacgaaggagaagctgaaacagctcaagagtaatatc
gacaccctcaccatgtccgccacgccgataccgcgaactttacagttttcactgatggga
tcgcgcgatttctccaccatcaatactcccccacccaaccgttatccggtacagacggag
gtgcacaccttcgacgtggaggtgatgaaggaggcgatcaactacgaaataagccggaac
ggacaggtcttcatcgtcaataaccggattcagaatatctacgagatggaagcactcctc
aggcgggagatcaaggatatccgtattgcagtgggtcatgggcagatggatcccaagaag
ctggagaccatcattgcagacttccttaaccacgaatatgatgtcctgctggcgaccacc
atcatcgaatcgggaatcgacatgcccaacgtaaatacaatcattgtcatcaacgcacaa
aacttcggattgagcgacctccatcaactccggggtcgtgtaggtcgaagcaaccgtaaa
gcgttctgttacctgatggcaccaccgctctatacgctcagcaacgattcccggcgtcgg
ttgcaggcaatcgagaacttctccgaactgggcagcggcatccatatcgcaatgcaggat
ctcgacatccggggtgccggcaacctattgggagcagagcagagcggctttatcgcagac
ctcggatatgaaacctaccagaagattctggccgaggccgttcaggagctgcggaaagag
gagttcaccgaactctaccgtcagcaacaggagttgaaagctgaaagggaagaaaacttc
gtggacgaggtcaccgtggagagtgatctggagctgatgtttccggtatcctatatcccc
aacgatgcagagcgggttgccatctaccgtgaactggacaatatggaaacggaaacgcag
atactggattttaccaaacggctggaagaccgttttggtaaaatccccgcacaagggaag
gagcttatccggattgtgcggctgcgtcgtctcgccaaatcactcgggattgaaaaaatc
ttcctgaaaagtggacagatgactcttttcctgatctccgatgtagaatcaccctattac
cgctcatcggtcttcgacagactgctgaatttcatccagacacatccgcgtgactgcctg
ttgcgggaagcgggtaaaaaacgctcggtaaccatccggaatgtaacaaccgtagaggcg
gcggttgcactaatagagtccatccactga
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