Petrimonas mucosa: ING2E5A_2739
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Entry
ING2E5A_2739 CDS
T04553
Name
(GenBank) Contig10, whole genome shotgun sequence
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
pmuc
Petrimonas mucosa
Pathway
pmuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ING2E5A_2739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmuc03019
]
ING2E5A_2739
Messenger RNA biogenesis [BR:
pmuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ING2E5A_2739
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
SCM59534
UniProt:
A0A1G4GAF2
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Position
I:complement(3319808..3320956)
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AA seq
382 aa
AA seq
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MDIKVHRGLEQIGGCITEISTATSRVFIDFGQNLPGNGEPTTPEQDRLMVENIFATNAKM
HEAVFYTHGHEDHVGLFEYIPTCVPQYMSDGTKELLLIKYRTLKEGVELSLEQLQNDANS
TKEHIEEVIVQKSNAEKKIKIITKMNSWGRTPPRKKPYSISIGDITITPFFNCHSIYDSH
MFLIEADGKRIWHTGDYRAHGYMGKGLIPTLRKYATNIDTLITEGTMLSRNDECIHECKV
SEKMANVMKSFKYVFVLASATDIERLASIKNAALEAKKTLYVCSKFMSSTMKFFTERESE
LSHGLFSFSPRMLRFNGLERIKKKGFVLIAGTSQISRVEELTKELPIEETLLVYSSWEGY
YTIPEQVAANPGYKNFRELFCN
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggacataaaggtacatagaggattagaacaaataggaggttgcataacagaaatcagt
actgcaacttcacgagtctttatagattttggacagaacttaccaggcaatggtgaacct
acaacaccagaacaagataggttaatggtggaaaacatctttgccactaatgctaaaatg
catgaagcagtgttctatactcatggtcatgaagatcatgtaggattgttcgaatatata
cctacctgtgttccacaatatatgagtgatggtacaaaggaacttttgcttataaaatat
agaacactaaaagaaggagttgaacttagtcttgaacaattacagaatgatgcaaattca
acaaaagaacacatagaggaagtaatcgttcaaaaatcaaatgcagaaaaaaagattaag
ataattacaaagatgaactcatggggtaggacccctcctcgcaagaaaccatattctatt
tccattggagatatcacaattactcccttctttaattgccattccatttatgattcacac
atgtttctcattgaggctgatgggaaacgcatttggcatacaggtgactatagagcacat
ggttatatgggcaaagggttgataccaacattaaggaagtatgctacaaacattgatacc
cttatcacggaaggtacaatgttgagtcgaaatgatgaatgcatccatgaatgtaaagtg
tcggaaaagatggccaatgtgatgaaatcattcaagtatgtttttgtattggcttcagct
acagacatagaaagattggcttctatcaaaaatgcagctttagaagctaagaaaacacta
tatgtatgctcaaaattcatgtcatcgactatgaagtttttcacagagcgggaatcggaa
ctatctcatgggttatttagtttctctccccgtatgctacggtttaatggattggagaga
atcaaaaagaaaggttttgttcttattgccgggacatctcaaatatctcgtgttgaagaa
ctcaccaaagagctgcccattgaagagacacttctggtttactcgtcttgggagggttac
tatactattcctgaacaagtagctgcaaatcctggttataagaattttcgtgaacttttc
tgtaattaa
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