Pseudomonas mucidolens: NCTC8068_00002
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Entry
NCTC8068_00002 CDS
T08935
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03030
DNA replication
pmud03430
Mismatch repair
pmud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8068_00002 (dnaN)
03430 Mismatch repair
NCTC8068_00002 (dnaN)
03440 Homologous recombination
NCTC8068_00002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_00002 (dnaN)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_00002 (dnaN)
Enzymes [BR:
pmud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8068_00002 (dnaN)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC8068_00002 (dnaN)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC8068_00002 (dnaN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
TubC_N
Motif
Other DBs
NCBI-ProteinID:
SQH31096
LinkDB
All DBs
Position
1:1525..2628
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AA seq
367 aa
AA seq
DB search
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE
DAAEPGEITVPARKLMDICKSLPNDAMIDIKVDEQKLVVKAGRSRFTLSTLPANDFPTVE
EGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGIIRAVATDGHRLAMC
SMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDG
KFPDYERVLPKGGDKLVIGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQ
EEAEEEVGVDYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaccattcaacgcgaagccctgttgaaacccctgcaactggtcgcaggcgtc
gtcgagcgccgacagaccttgccggtgctttccaacgtattgctggtggtcgaaggccag
cagttgtcgttaaccggtaccgatctggaagttgagctggttggtcgtgtacagctggaa
gatgccgcagagcccggtgaaatcaccgtacctgcgcgcaagctgatggacatctgcaag
agcctgcccaacgatgcgatgatcgacatcaaagtcgatgagcagaagctggtggtcaag
gccgggcgcagtcgtttcacgctttctaccctgccggcgaatgacttcccgacggtagaa
gaaggcccaggttcgctgacgtgcagcctggagcaaagcaagctgcgccggttgatcgag
cgcaccagcttcgccatggcccagcaagacgtgcgttattacctcaacggtatgctgctg
gaagtctcggcaggcatcatccgtgcggtggccactgacggccatcgcctggcgatgtgt
tcgatgcaggccgacatcggtcagccggaccgtcaccaagtgattgtgccgcgcaagggt
atcctcgagctggcgcgtttgctcaccgagccggacggcaacgtcagcatcgtgctcggc
caacaccacatccgcgcgacgactggtgagttcaccttcacctccaaactggtggacggt
aaattcccggattacgagcgcgtcctgcccaaaggcggcgacaagttggtgatcggcgat
cgccaagccctgcgtgaagcgttcagccgtactgcgattctttccaatgaaaaatatcgt
ggtattcgtctgcaattggccaatggtcaattgaagatccaggctaacaacccggaacag
gaagaagcggaagaagaagtaggcgtcgattacaacggcggctccctggagatcggcttc
aacgtcagctacctgctggacgtgctgggcgtgatgacgactgaacaggttcgcctgatt
ctgtctgactccaacagcagcgcgctggtgcaggagtcggataatgatgactcggcctac
gtcgttatgccgatgcgtctgtaa
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