Pseudomonas mucidolens: NCTC8068_00077
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Entry
NCTC8068_00077 CDS
T08935
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03030
DNA replication
pmud03410
Base excision repair
pmud03420
Nucleotide excision repair
pmud03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8068_00077 (polA)
03410 Base excision repair
NCTC8068_00077 (polA)
03420 Nucleotide excision repair
NCTC8068_00077 (polA)
03440 Homologous recombination
NCTC8068_00077 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_00077 (polA)
03400 DNA repair and recombination proteins [BR:
pmud03400
]
NCTC8068_00077 (polA)
Enzymes [BR:
pmud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC8068_00077 (polA)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC8068_00077 (polA)
DNA repair and recombination proteins [BR:
pmud03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC8068_00077 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC8068_00077 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
SQH31171
LinkDB
All DBs
Position
1:78304..81111
Genome browser
AA seq
935 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAARRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDVDGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEM
AFLSYQLATIKVDVPLEVGLDDLHLIEPDREKLLELYTLLEFKSWYEEIARDAKRVELKA
AAEVAPVQASVVPETVEAVASVAVEPQYETILDQARFDAWLKKLNDAKLFAFDTETTGLD
AHQAQLVGVSFAVQANEAAYIPLTHAYIGVPQQLDRDTVLLALKPLLEDPEKLKVGQHAK
FDMNILANCAIGGDPACGINVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLEHDTVSFQ
DIAGKGAKQLTFDQIPLELAGPYAAEDADVTLRLHLALHAQLAALPSLASVLTDIEMPLV
PVLARIERQGALVDADLLGVQSIELGNKMVELERQAYEIAGEQFNLGSPKQLGVILYEKL
GLPVLKKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTR
RIHTSYHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRI
MAHLSKDEGLLNAFRDNLDVHTATAAEVFKVELGEVTSDQRRSAKAINFGLIYGMGAQKL
GKDIGVDTKTAKAYIDVYFARYPGVREYMERTRAQASDQGYVETLFGRRLYLPDIHSNKP
QERAGAERTAINAPMQGTAADIIKKAMVKVDNWLTESALDAKVILQVHDELVVEVREDLV
AEVSEKIREHMSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcatacctgtatcgcgctttccac
gcgctgccgccgctcaccacgtccaaaggcctgccgaccggcgcggtcaagggcgtgttg
aacatgctcaaaagcctgcgcaagcaatacccggacagcccgttcgcggtggtgttcgac
gccaagggcgggacatttcgcgatgatatgtacgccgaatacaaggctaaccgccccagt
atgcccgacgacatgcgcgtgcaaatcgaaccgctgcaccagagcgtgattgccctgggc
ttcccgctgctgtgtgtcgaaggcgttgaagctgacgatgtgatcggaacattggcccgc
agcagcgcggcagccaggcgaccggtggtgatctccacgggtgacaaagacatggcgcag
cttgtcgacgggcacattaccttggtcaataccatgacgggtagttccatggacgttgac
ggcgtaaaggagaaatttggggtcgctcccgagcagatcatcgactatctggcattgatg
ggcgattcgtccgacaacattccgggtgtgccggggattggtcccaagacggcttccggc
ttgctggtgggcgtcaatggtggcctgaaagagctttatgagcagctcgatatcgtcccg
accctgcccatccgcggcgccaagaccttgccggccaaactcgaagaacataaagagatg
gctttcctttcctatcagttggcgaccatcaaggtcgatgtaccgctggaggtcgggctg
gacgatctacatttgatcgagccggaccgcgagaagctgcttgaactgtacaccttgctg
gagttcaagagctggtacgaagagattgcgcgtgatgccaagcgcgtcgagctgaaagcg
gccgccgaggtcgcgccggtccaggcctctgttgtgcccgaaactgtcgaggcggtggct
tcggtggccgtcgagcctcagtacgaaaccatccttgatcaggcgcgtttcgacgcctgg
ttgaagaagctcaatgacgccaagctatttgccttcgataccgaaaccaccgggctcgac
gctcatcaagcgcagttggtgggggtgtcctttgccgtacaagccaacgaagccgcctat
atcccgctgacccatgcctatatcggcgtgccgcagcaactggaccgagacacggtgttg
ctggcgttgaagccgctgctggaagacccggaaaagctcaaggtcggccagcacgccaaa
ttcgatatgaatatcctggccaattgcgccattggtggcgatccggcctgcggtatcaac
gtgcgaggcattgccttcgacaccatgctcgaatcctacgtgttgaactccaccgcgact
cgacatgacatggacagcctggcgaagaagtatttggagcatgacaccgtcagcttccag
gacatcgccggcaagggcgccaaacaactgactttcgaccagattcctctcgagctggcc
ggtccgtatgcggcagaggacgctgatgtgaccctgcgtttgcacttggcgctgcatgcg
cagctcgcggcgttgccgagcctggccagcgtgctgaccgatatcgagatgccattggtg
cccgtactggcgcggattgaacgccaaggggcgttggtggatgccgatttgctgggtgtc
cagagtattgagctgggtaacaaaatggtcgagctggagcgccaggcgtatgaaatcgcc
ggggagcagttcaacctcggttcgcccaagcagttgggggtgattctctacgaaaaactc
ggcctcccggtgctcaagaagaccggcaagggccaggcgtccacggccgaggaagtgctg
gccaaactcgccgaagatgattatccgctgcccaaggtactgatgcagtaccgcagcatg
agcaagctgaaaagcacctacaccgaccgcctgccagaacagatcaacccgcggacccgg
cggattcacacctcttaccatcaggccgtggccgctaccgggcgcttgtcgtcaagcgat
ccgaacctgcagaacattccggtacgcaccgccgaaggtcggcggatccgccaggcgttc
gtcgcgcccaagggctacaagttgttggcggcagactattcgcagattgagctgcggatc
atggcacacctgtccaaggatgaaggtttgctgaatgcgttccgcgacaatctggatgtg
cacacggccacggcggccgaggtgttcaaggttgaactgggcgaagtcacgtccgaccag
cgccgcagcgccaaggccatcaacttcggcctgatctacggcatgggtgcccagaagctg
ggcaaggacatcggtgtcgatactaagacggccaaggcttatatcgacgtgtacttcgcc
cgttatcccggggttcgcgagtacatggagcgcacccgcgcccaggcgtctgatcagggt
tatgtcgaaacactgttcgggcgccgattgtatctgccggatatccattccaataaaccc
caggagcgtgccggcgcagagcgtacggcgatcaacgcgccgatgcagggcaccgcggcg
gatatcatcaagaaagcgatggtcaaggtcgataactggctgactgaatcagccctggat
gccaaggtcatcctgcaggtacacgacgaattggtcgtcgaggtgcgtgaagacctggtg
gccgaagtcagcgaaaaaatccgtgagcacatgagcgccgcggcgcagttggatgtgcca
ctgttggttgaggtcggggtaggtaataactgggacgaggcgcactaa
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