Pseudomonas mucidolens: NCTC8068_00132
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Entry
NCTC8068_00132 CDS
T08935
Symbol
apxIB_1
Name
(GenBank) ABC transporter-like protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC8068_00132 (apxIB_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_00132 (apxIB_1)
02044 Secretion system [BR:
pmud02044
]
NCTC8068_00132 (apxIB_1)
Transporters [BR:
pmud02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCTC8068_00132 (apxIB_1)
Secretion system [BR:
pmud02044
]
Type I secretion system
Adhesin protein transporter
NCTC8068_00132 (apxIB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA
DUF87
Peptidase_C39
RsgA_GTPase
MMR_HSR1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
SQH31219
LinkDB
All DBs
Position
1:153096..155132
Genome browser
AA seq
678 aa
AA seq
DB search
MLTTGLPLPSQRLSADLLARAAARAGLQGRLLQRKLDAIPAIAMPALLLLKEGRTAVLLG
WQGEDEAQVLLSESDGGETIVKRQALADDYTGKVFFAQPQHKFDVSHGTLIPRARSWFRD
TLKRSRWLYADAIAASFLINIIAMAAPLFVMNVYDRVVPNQAIATLWVLATGIFIAYTFD
LILKSLRSLCLDLAGKKTDLIISATLFERIVGMSMKYRPARVGSFAQNIHEFQSLRDFLA
SLTLTSLIDLPFTLLIFLVIALLGGHLVWIPMLAFPIALGIGYLLQKPLVATMERTMALA
SERQSSLIETLAGLDAVKVNNAESERQYQWEQTIGTLSRLELRVKMLSGLSMNITLLIQQ
LAGVIMIVFGVYQIIDGNLSMGGLIACYMLSGRALSPLASLSGLMTRYQQAKVTMVSTDQ
MMELPQERNFEERPLSRRTLQGAIECRGLNFTYPNQQNMALRNINLVIKPGEKIGIIGRS
GSGKSSLAKLIVGLYQPDSGALLVDGVDIRQIDVSELRHNVGYVPQDIQLLAGTLRDNLV
SGARYVEDELVLQAAELAGVHEFARLHPQGYELQVGERGQNLSGGQRQNVALARALLLNP
PILLLDEPTSAMDNTGEERLKQRLQSVVENKTVVLVTHRASLLSLVDRLLVIDRGQILAD
GPKAVVMDALKKGQISVA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaccggcctgccattgccatcccagcgtctgagcgccgatttgttggcccgt
gccgcggctcgggccggtttgcaggggcgtctgttgcaacgcaagctggatgcaattccc
gccattgccatgccggcgctgctgttgctcaaagagggtcgcaccgccgtgctgctcggt
tggcagggtgaagacgaagcgcaggtgctgctcagcgaaagcgatggcggcgaaaccatc
gtcaagcgccaggcgctggccgatgactacaccggcaaagtgttctttgctcaaccccaa
cacaagttcgacgtcagccacggcaccctgattccgcgtgcccgttcctggtttcgcgat
accctcaagcgttcgcgctggttgtacgccgacgccatcgccgccagtttcctgatcaac
atcatcgccatggctgcgccgttgttcgtaatgaacgtctacgaccgcgtggtgccgaac
caagccattgcgaccctgtgggtactggccaccggtattttcatcgcctacaccttcgac
ctgatcctcaaaagcctgcgcagtttgtgcctggacctggccggcaagaaaaccgacctg
atcatttcggcgacgctgttcgagcgtattgtcggcatgtcgatgaagtaccgcccggcg
cgagtcggcagcttcgcccagaacatccacgagtttcaaagcctgcgcgattttctcgcg
tccctgaccttgaccagcctgattgacctgccgttcaccctgctgattttcctggtgatc
gccctgctcggcgggcacttggtgtggatcccgatgttggccttcccgattgccctgggc
atcggttacctgttgcaaaagccgctggttgcgaccatggagcggaccatggccttggct
tccgagcgccagtcgagcctgattgaaaccctggccgggctggatgcggtcaaggtcaac
aacgctgagagcgagcgccaataccagtgggaacaaaccatcggtaccctcagccgtctt
gagttgcgggtgaagatgctctccgggctgtcgatgaatatcaccttgctgatccagcaa
ctcgccggtgtgatcatgatcgtcttcggcgtctaccagatcattgacggcaacctcagc
atgggcggcctgattgcctgctacatgctcagcggtcgtgcgctcagcccgctggcgtca
ttgtcgggcctgatgacccgttaccagcaggccaaggtcaccatggtctccaccgaccag
atgatggagctgcctcaggagcgcaacttcgaagagcgtcccctgagtcgtcgcaccctg
caaggcgccatcgagtgccgaggcttgaactttacgtaccccaaccagcagaacatggcg
ctcaggaatatcaacctggtgatcaagcccggggagaaaatcggcatcatcggccgtagc
ggttcgggcaagagctccctggccaaactgatcgtcggcctctaccagccagactccggc
gccttgctggtggacggtgtggatattcgccagatcgacgtcagcgaactgcgccataac
gtcggctatgtgccgcaagacatccagttactggccggcaccctgagggacaatctggtc
tccggcgcccgctacgtcgaagacgaactggtgctgcaagccgctgaactggcgggcgtg
catgagtttgcccggctgcatccgcaaggctacgaactgcaagtgggcgagcgtggccaa
aacctctccggcggccagcggcaaaacgtcgccttggctcgcgccctgctgctcaatcca
cccattctgttgctggatgaacccaccagcgccatggacaacaccggtgaagaacgcttg
aaacagcgcctgcaatccgttgtggaaaacaagaccgtggtgctggtgacacaccgcgcg
tcgttgctctccctggtggaccgtttgttggtgatcgaccgagggcaaatcctcgcggat
ggtccgaaagccgtggtgatggatgcgttgaagaaggggcagatcagtgttgcgtaa
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