Pseudomonas mucidolens: NCTC8068_00215
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Entry
NCTC8068_00215 CDS
T08935
Symbol
gabD1
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00250
Alanine, aspartate and glutamate metabolism
pmud00310
Lysine degradation
pmud00350
Tyrosine metabolism
pmud00650
Butanoate metabolism
pmud00760
Nicotinate and nicotinamide metabolism
pmud01100
Metabolic pathways
pmud01120
Microbial metabolism in diverse environments
Module
pmud_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
NCTC8068_00215 (gabD1)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NCTC8068_00215 (gabD1)
00310 Lysine degradation
NCTC8068_00215 (gabD1)
00350 Tyrosine metabolism
NCTC8068_00215 (gabD1)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
NCTC8068_00215 (gabD1)
Enzymes [BR:
pmud01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
NCTC8068_00215 (gabD1)
1.2.1.20 glutarate-semialdehyde dehydrogenase
NCTC8068_00215 (gabD1)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
NCTC8068_00215 (gabD1)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
SQH31298
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All DBs
Position
1:246847..248289
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVNNPATGEILGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERANKLRRWFELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPKGVLSVVTGSAGDIGGELTSNPIVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKVAVAKLKIGNGLEEGTTTGPLIDEKAVAKVQEHIADALSKGATLLAGGKV
MQGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcattgatggtgcttgggtc
gatgccgacaacggtcagaccatcaaggtcaacaacccggcgacaggcgaaatcctcggc
actgtgccgaaaatgggcgccgccgaaacccgccgcgccatcgaagccgccgacaaggcc
ctgccagcctggcgcgcactgaccgccaaggagcgcgccaacaagctgcgccgctggttt
gaactgctgatcgagaaccaggacgacctcggtcgcctgatgacccttgaacaaggcaag
ccgttggccgaagccaagggcgaaatcgtctacgccgcgtccttcattgaatggttcgcc
gaagaagccaagcgcatctacggtgacgtgatccccggccaccagcccgacaagcgcctg
atcgtgatcaagcagccgatcggcgtgaccgctgcgatcacaccgtggaacttcccggcg
gcgatgattacccgcaaggccggcccggccctggccgctggttgcaccatggtcatcaag
cctgcttcgcaaaccccattctcggccctggccctggttgagctggcgcaccgtgccggc
atcccgaaaggcgtgctgagcgtggtcaccggcagcgctggcgacatcggcggcgagctg
accagcaacccgatcgtacgcaagctgtcattcaccggctcgaccgaaatcggtcgccaa
ctgatggctgaatgcgccaaggacatcaagaaagtctccctggaactgggcggtaacgca
ccgttcatcgtgttcgacgacgctgacctggataaggccgtcgagggcgcgatcatctcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacattcaggactcg
gtgtacgacgcattcgccgaaaaactcaaagtggcagtggccaagctgaagatcggcaac
ggcctggaagagggcaccaccaccggtccgctgatcgacgagaaagccgtggccaaggtg
caggaacatatcgccgatgccttgagcaaaggcgccaccctgttggcgggcggcaaggtc
atgcaaggcaatttcttcgagccgactatcctgaccaacgtgccgaaaaacgccgcagtg
gccaaggaagaaacttttggccccttggcaccgttgttccgcttcaaagacgaagccgaa
gtgatcgccatgtccaacgacaccgagttcgggttggcctcgtacttctatgcccgcgac
ctgggccgtgtattccgtgtggcggaagccctggagtacggtatggtcggcgtcaacact
gggttgatctccaacgaagtcgcgccgttcggcggtatcaaggcctcgggcctgggccgt
gagggttccaagtacgggatcgaggattacctggaaatcaaatacctctgcctgggcatc
taa
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