Pseudomonas mucidolens: NCTC8068_00258
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Entry
NCTC8068_00258 CDS
T08935
Symbol
yhgF
Name
(GenBank) S1 RNA binding domain-containing protein
KO
K06959
protein Tex
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
NCTC8068_00258 (yhgF)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
YqgF
HHH_7
T2SSK
HHH_6
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
SQH31339
LinkDB
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Position
1:complement(293968..296292)
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AA seq
774 aa
AA seq
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MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDIQLRHLEERLRY
LRELDERRLSILASIEEQGKLTPQLERDIKLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELSDALFNDPSLTPDVEAARFVDTEKGVADVKAALEGAKYILMERFAEDANLLEKLRN
YLKQEAILSARVIAGKEEEGAKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVG
EELPGTMHPCEGMIGQQFGIQNQNRPADKWLGEVVRWTWKVKLYTHLETDLLGELRDGAE
TEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHN
KWDQTLAILAALCAKHAVDLIAIGNGTASRETDKLAQELIKKYPGMKMTKVMVSEAGASV
YSASELASREFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARG
LDAVVEDCVNAVGVDVNTASVALLARISGLNATLAQNIVAHRDENGAFKTRAALKKVPRL
GEKTFEQAAGFLRVMNGDNPLDASAVHPEAYPLVQRIAAQTDRDIRSLIGDAAFLKRLDP
KQYTDETFGVPTITDILQELEKPGRDPRPEFKTAEFQEGVEDLKDLQPGMILEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVKVKVMEVDIPRKRVGLSMRMS
DTPGEKVDGARGSRPGSAPRQSQGNAPRKESAAPAPSNNAMASLFANAKQLKKR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcaacagccgcatcgccgaggaactcggtgtacgcccacaacaggtcgaa
gcggccgtcgctctactggatgaaggctccaccgtgcccttcatcgcccgttaccgtaaa
gaagtgaccggcagcctcgacgatatccagttgcgtcatctggaagagcgcctgcgctac
ctgcgagaactcgacgaacggcgtctgagcatcctcgccagcatcgaggaacagggcaag
ttgaccccacaactcgagcgcgacatcaagctcgccgacaccaagacccgtcttgaagac
ttgtacctgccctacaaacagaagcgccgcaccaagggccagatcgccctggaagccggc
ctgggtgagttgtccgacgctctgttcaacgacccgtcgctgaccccggacgtcgaagcc
gcacgcttcgtggatactgaaaaaggcgtcgcggacgtcaaggctgcccttgaaggcgcc
aagtacatcctcatggagcgcttcgccgaagacgccaacctgctggaaaaactacgcaac
tacctgaaacaagaagccatcctcagcgctcgcgtgatcgccggcaaggaagaggaaggc
gccaagttccgcgactatttcgaacacgacgagccgctcaagagcatgccgtcgcaccgt
gcactcgccattttccgtggccgcaacgaaggtattctcagctcggcgctgaaagtcggt
gaagagttgccgggcaccatgcacccgtgtgaaggcatgatcggtcaacaattcggcatc
cagaatcagaatcgtcctgccgacaagtggctgggcgaagtcgtgcgctggacctggaag
gtcaagctctacacccacctggaaaccgacctgctcggcgaattgcgcgacggcgccgaa
accgaagcaatcaatgtgtttgcccataacctgcacgacctgctgctggccgcgccggcc
ggtccgcgcgccacgctggggctggacccgggcctgcgcaccggttgcaaggtcgccgtg
gtcgacgccaccggcaagctgctggaccacgcgacggtctacccccacgttccgcacaac
aagtgggaccagaccctcgcgatcctagccgccctgtgcgccaagcatgcggtggacctg
atcgccatcggcaacggcaccgccagccgcgagaccgacaagctcgcgcaggagctgatc
aaaaaatatccaggcatgaagatgaccaaggtcatggtttccgaggcaggcgcttcggtg
tactcggcgtcggaactggcttccagggaattcccggatctcgacgtatcgatccgtggc
gccgtgtccatcgcccgccgcctgcaggacccactggcggaactggtgaaaatcgacccg
aaatccatcggtgtcggccaataccagcacgacgtgtcgcagctgaaactggcacgcggc
ctggacgcggtggttgaagactgtgtgaacgccgtcggtgtcgacgtgaacaccgcatcg
gtcgcgttgctggcacgtatttccggcctcaatgccaccctggcgcagaacatcgtcgcc
caccgcgacgaaaacggtgcgttcaagacccgtgccgcgcttaaaaaggtcccgcgcctg
ggggaaaaaacctttgaacaagctgccggcttcttgcgtgtaatgaacggtgataaccca
ctggatgcttccgcggtccacccggaagcctatccgctggtacagcgcatcgccgcgcaa
accgaccgcgacattcgctcgttgatcggcgacgcggcctttctcaagcgcctggaccca
aaacaatacaccgacgaaaccttcggcgtaccgaccatcaccgacatcctccaggagctt
gaaaagcctggccgcgatccgcgtccggaattcaagaccgccgaattccaggaaggcgtc
gaggacctcaaggacctgcaaccgggcatgatccttgaaggcgtggtgaccaacgtgacc
aacttcggcgcgttcgtggatatcggcgtgcatcaggacggtctggtgcatatctccgcg
ctttcggaaaaattcatcaaggacccgcgcgaagcggtgaaggccggtgacgtggtcaag
gtcaaggtcatggaagtcgacatcccgcgtaaacgcgtcgggctgtcgatgcgcatgagc
gacaccccaggcgagaaagtcgacggcgcccgcggctcgcgtccaggttcggcgccacgc
cagtcccaaggcaatgcaccgcgcaaggaaagcgccgcgccggctccgagcaacaacgcc
atggcttcgttgttcgccaatgccaaacagctgaagaaacgctga
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