Pseudomonas mucidolens: NCTC8068_00270
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Entry
NCTC8068_00270 CDS
T08935
Symbol
fitD
Name
(GenBank) cytotoxin FitD
KO
K19615
insecticidal toxin
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC8068_00270 (fitD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pmud02042
]
NCTC8068_00270 (fitD)
Bacterial toxins [BR:
pmud02042
]
Type III toxins: Intracellular toxins
Others
Insecticidal toxin FitD/Mcf
NCTC8068_00270 (fitD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TcdA_TcdB_pore
Motif
Other DBs
NCBI-ProteinID:
SQH31351
LinkDB
All DBs
Position
1:306508..312546
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AA seq
2012 aa
AA seq
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MAVSTTQSTLDRNNRCSELAYQHLDQKGVAEAFAAAACAVQNLAWIAQAIGDREIKGGVL
SVAGEPGVQGSSDGTRRFAADPTQFALSNTLSTEHLGKPGRLPAQGHARLVEVGPQLYEV
EYIDLSKHTSAAGPSSVPAYFLGYNGANQANAMPAYVDIPKRAVEGRFLFTGALSGCSVI
VTDLDPTTYRVYHDGRTNSSLLYDNVAMAVDYKDYRIPGSILALAVVCMQYVEGEWQMVL
QRHDFERDSKGGIRLKRRGVAQALSTYRANDQTVKHNQAEFAAYRKQVHERLKKAATQFG
VSVEGVADGLYIGGGFSYESPAIAAWIRLRKELEAKVAADIDKIIADKYLLSKQRSSAIN
DEKIRQLNLTHEYYKAQFHTLLREVRDVEHLWLWQQIKTKEGTIGVLRIDESPSQNLAPV
HTTSLAELYEIAQTNNEYLHKVLNRVELYSDDFRRAGSDFQRLVVQDFFLLRVADQSGGR
CYPLVRAMAVALGCGGQQGVDRLVERLQVATADPQARNSMLLKDTLSTLHSNVHAVQAST
QLGQFVLDEVLSRLQKTTQTSMFALNTRWHAMLLGSVVTDEVSRYYFYDPNVGIFAFGAA
AALAGAMQHYLVTRGLAAYYGAFGSQSAPAFNLIEIDTRAMAEVPVGLGLNVADLSQSEA
LERVSDVRSQAEQAVNTHVRIAEDLQLRTALATLDAERWGARFYAASTVLANSASLSERW
VLVIDNTQDLGDGRFRVQFIDRNQPGKTRWVETRDATCLKYRGFVDQHLQTLDQHFSLKG
EPFRPEGGVAATAPFDGLNAGFAVQALIQWFADKHRKEARNTRSSPELATLLKLHGYVNS
TQMVHGAVQDVSQVIEQVSTALRNEEVIAGRFVSALGRTLNEGVGVLFGEVMVGIDAYEL
AYAENETQKAVFGTQLAFDAASLVTSSVGVTAGLMEASTLATMFSGGGVILGGLGVGFTA
LAQAFGAVAEDAKAVGCYFEMVDTAYKNHGYRYEASQDALVPLAGAVVQRLDLGKGQIEF
ASQYIYSTHYTWIGDLPQIDLERDHAIEVRSGIGYGVGCQPIAQREARLVILPSTPKSYI
SHDYGLLPFATDRHDMGFDVIRRLQSDKFSFAFYVFPGEQIIRRIHHEYVKTTIAVVLDK
TDRQLLVPTLPTELYGYLNYRFTGGGGVYQIELNEGAHVRIEKSTPSTWIIITRQLERDV
ISFMDSLCDPDGDEVLYYRLMIGGVLVDIAPAHVDDIRLVQHDREQLKVNFATKTTQVER
IDASQWPAPGLSIEQHLQDLAKAHRLQGQFVLVENYRHNDRSVGRAFYDVARNRMLFTDT
CEELAKHARLGAVTNEHAYFYNAEHAIAWRVIIATGQVEGQFNPFLGRHESQSLRLWQQG
DAIYLAHRHPANGKPQSESVYKIHGTQMELLRTTGHDFLLRSLWQSNTANIFPGLKSGVP
THTLGRLIEPTKAELMMIHGTDDAGVDHRYWVRTPSDLVIKPNLEPPATDPRQFDAAEQT
HSAWPIPDDLVLAGNMLLPDGGEVFFFYSKVQKALFRQKGPGPASMDDERPTASRVTTPI
LANVLNISGHLIVITEDGRVARLNALGQLSYEAVNEHWLQGRVSWWQDLACVAEGRATLA
VFGVKDATGKGALPVWFHNAQVVVASAFLQDKTLQFLGFEADDTTARLFEPASGTLYLQR
SMTANELAVAFGTDARLKASAPIPVATESAPGQRFKSAEQVDAGIRLVTVNGEVLLRTPN
GALQLVAVDAQWQQDRQTYNAWWQWLAFDAEAQVKNRYRLPEALAALARQWDAKGVLTLL
GDGAQGWFDVDSGQVFSSRGIHAADNLRFLGVAVGQAAAYVYCSTNQALYRITEKAPRLL
AEFTAVKRFGATLSLQITQNDVTPLILAGVDNLILCGNAGINFYTLGAEVWAHYRTVILD
HNHPASVLNRIQLSMTDSKAILVSRSDDDLLLTDGNTGATLVVRKAFNQRSDNPLIELPD
ATNLLRITCLVDNFIKRSYSSGALVDLSIALR
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagcactacgcagagcacacttgatcgcaacaaccgctgctccgaacttgct
tatcaacacctcgatcaaaaaggcgttgccgaagcgtttgcagccgcggcatgcgccgtg
caaaacctggcgtggatcgcgcaagcaataggggatcgcgagatcaagggtggcgtgctg
tctgtggcgggggagcccggcgtccaaggaagcagcgacgggacccggcggttcgccgcc
gatcccacgcaatttgccctatccaataccctcagtaccgaacatctgggcaagcccggg
agactacccgcgcaagggcatgcgcgcttggtggaggttggcccgcagttgtacgaggtc
gaatatatcgacttgagcaagcacacatccgccgccggtccaagcagcgtgccggcgtat
tttcttggctacaacggcgccaaccaagctaatgcaatgcctgcctatgtggatattcca
aaacgggcggtggaggggcgcttccttttcaccggagcgttgtcaggttgctcggtgata
gtgaccgatcttgatcccactacttatcgggtttatcacgacggtcgcaccaacagctct
ctgctttacgacaatgtagcgatggcggtcgattataaggactatcgaataccgggcagc
atcttggcccttgccgtggtttgcatgcagtacgtcgagggtgaatggcagatggtgctt
caacgccatgattttgaacgcgacagtaaaggcggcatacggttgaagcggcgtggcgtg
gcgcaagcgctttccacgtatcgcgccaacgatcaaacggtgaagcataaccaggctgaa
ttcgcggcctaccgcaaacaggttcacgaacgactgaagaaagcggctacccagtttggt
gtgtcggtcgaaggggttgcggacggcctgtatataggcggcggattctcctatgagagc
ccggcaattgctgcctggattcgcctgcgaaaagagctggaggctaaagtcgcagcggat
atcgacaaaataatagccgacaaatatctgctctctaaacagcgaagcagcgccatcaat
gatgaaaaaataaggcagctgaacttaactcatgagtactacaaggcgcagtttcatacg
ctgttgagagaagtgcgcgacgtcgagcatctttggttatggcagcagatcaagaccaaa
gagggaacgataggcgtattgcgcattgacgagtcccccagtcagaacttggcgccggtg
cacaccacaagcctggctgagctttacgagatcgcccagacaaataacgagtacctccat
aaggttctgaatcgtgtggagctgtacagcgatgactttcggcgcgcgggcagcgatttt
cagcgcttggtagtgcaggatttttttctgttgcgggttgcagatcaatccggtggccgt
tgttatccgttggtccgggccatggccgttgcactggggtgtggcggtcagcagggtgtt
gatcgtttggtggagaggctacaggtggcgacagccgatccacaggcgcgtaactcgatg
ctgctcaaagacacgctgagcacattgcactccaatgttcatgccgttcaggcgtcaacc
cagttagggcaattcgtactggatgaggtgctgtcacggctgcaaaaaaccacgcagacc
tcaatgttcgcactcaatacccgctggcacgcgatgctgctcgggagcgtcgttacagat
gaggtatcgcgttactatttctatgacccgaatgtcgggatttttgccttcggcgccgcc
gccgctctggccggtgcaatgcagcactatctagtgacgcgcgggctggccgcctattac
ggcgcgtttggcagtcaatcagcaccggccttcaacctgatcgagatagatactcgcgcg
atggccgaggtaccggtaggcctcggtctaaacgtggccgacctgagtcagtccgaggcg
ttggaacgtgtcagtgacgtacgttcgcaggccgaacaggcagtcaacacgcacgtgcga
atcgcggaggatctgcaactgcgtacggcgctggcaaccttggatgccgaacgctgggga
gcacggttctatgctgccagtaccgttctggcgaatagcgcgagtctgagcgagcgctgg
gtgctggtgatcgataatacccaggatctcggcgacggccgtttccgggttcaatttatc
gatcgcaatcagcctggaaaaacccgctgggtagaaacccgtgatgccacgtgccttaag
taccgcggttttgttgatcagcatctgcagactctggatcaacatttttcgctaaagggc
gagccgttcagacctgagggtggcgtggcggcgacggctccgtttgatggcttaaatgcc
gggtttgcggtgcaggcactgattcagtggttcgccgacaagcatcgcaaagaagcgcga
aacacgcgttcctcgcctgaacttgccaccttgctcaagcttcacggctacgttaattcc
acccagatggtgcatggagcagtacaggatgtatcccaggtcatcgagcaggtcagcacg
gcgttacgcaacgaggaggtgatcgccggccgttttgtttcggccttggggcgcaccctt
aacgaaggtgtcggggtgttgtttggcgaggtgatggtagggatagacgcttacgaattg
gcctatgccgagaatgagacacagaaggcggtgtttggcacccagttggcatttgacgcc
gcgagcttggtgacaagcagcgtgggagtgaccgctggactgatggaggcctccacgctc
gcgaccatgttttctggcggtggcgttattctgggcggactgggcgtgggtttcacggcg
ctggcacaggctttcggtgccgtggccgaggatgccaaggcggtgggttgctacttcgag
atggtcgacaccgcctataaaaaccacggctatcgctacgaggccagccaggatgcactg
gtgcccctggccggtgcagtggttcagcgtcttgaccttggcaaaggccagatcgaattt
gctagccaatatatctacagcacccactacacatggattggcgatcttccacagatcgac
ctcgagcgtgatcacgccattgaggtgcgcagcgggattggttatggcgttggctgccag
ccgattgcgcagcgtgaagccaggctggttattcttcccagtactcccaaatcctatatt
tcgcatgattacgggttgctgccttttgccacggatcgccacgatatggggtttgatgtc
atccgcagacttcagagcgataagttctctttcgcgttctacgtctttcctggcgagcag
ataattcgcaggatccatcatgagtacgtcaagaccaccattgccgtggtgctcgacaag
actgatcggcagttgctggtgccgacattacccacggaattatatggctacctcaactac
aggttcacgggaggtggcggtgtctaccagattgaactcaacgagggcgcgcacgtacgc
atagaaaaaagtacaccttcgacttggataattattacccgccagctagagcgtgacgtc
atcagcttcatggactcgctgtgtgatcccgatggcgacgaagtgctgtattaccggctg
atgatcggtggcgttctggtcgatattgctcctgcgcatgttgatgatattcgcctcgtc
cagcatgaccgcgaacagctcaaggttaacttcgcgactaaaaccacccaggtcgaacgc
atcgacgccagccagtggccggctcctggactgtctatcgagcagcacttacaggacttg
gccaaggcgcatcggttgcaggggcagtttgtgctggtcgagaactacaggcacaacgat
cgcagtgttggccgcgcgttctacgacgtggccaggaaccggatgctgttcaccgatact
tgcgaggagctggccaagcatgctcgcctgggggcggtgacaaatgagcacgcctatttc
tacaacgccgagcatgccatcgcgtggcgggtaatcatcgccaccggccaggtggaaggg
cagttcaatccatttctcggccggcatgaatctcagtcccttcgactatggcaacagggc
gacgcgatctatctcgcccatcgtcatccggcgaacggcaagccgcagagcgagtccgtc
tacaagatccatgggactcaaatggagttgcttcgcacgacgggacacgacttcctgctg
cgttcattgtggcagtccaacaccgctaatatttttccaggcttaaagtcaggtgttcca
acccatacgctgggccgattgattgagccgaccaaggcagaattaatgatgatccacggc
acagatgatgccggcgtggatcaccgctattgggttcgtacccccagcgaccttgtgatc
aaaccgaatcttgagccccccgcgactgatccccggcagtttgacgcggctgaacaaacg
cacagcgcttggccgatccccgacgatctggtgttggcaggcaacatgctcctccccgat
ggaggggaagtgttctttttctacagcaaggtacaaaaggcgctattccggcaaaagggc
cccgggccagcttcaatggatgacgagcgccccacggcatcgcgggtaaccaccccgatc
ctggcgaatgtgctcaacatcagcggtcacttgatcgtcatcaccgaagatggacgtgtg
gcccgactcaatgcgctggggcaactcagttacgaagccgtcaatgagcattggctccag
ggacgtgttagctggtggcaagacctcgcctgtgtcgccgaggggcgtgcaacgttggct
gtattcggggtcaaggacgcgactggcaagggtgcgctgccggtgtggttccacaacgct
caggtggtcgtggcttcggcatttctgcaagataaaaccttgcagttccttggctttgag
gcggatgacacgacggcccggctctttgagcccgcgagtggcacgttatatctccagcgg
tccatgactgcgaatgaactcgcagttgcgtttgggacggatgcgcgactcaaagcctcg
gcgcccattcccgtggccaccgagtcagccccagggcagcgtttcaagtcagcagaacag
gtggatgcggggatacgtctggttacggtcaacggggaggtgctgctgcgcactcccaac
ggggcgttacaactggttgctgtcgatgcacagtggcagcaggacaggcagacgtacaac
gcttggtggcagtggctggcgtttgatgccgaggcgcaagtgaagaaccgctaccggtta
cctgaagcacttgcagcacttgccaggcagtgggatgccaaaggtgtcttgaccttgctg
ggcgatggcgcgcaaggctggttcgatgtcgacagtggccaggtattctcgagtcgtggc
attcacgccgcggataacctgcgcttcctgggcgtcgccgttgggcaggcggcggcttat
gtgtattgctcgacgaatcaagcgctctaccggatcacggaaaaagctccgcggttgttg
gccgagttcacagctgtgaagcgtttcggcgcaactttatcgctgcaaattacccaaaac
gacgtcaccccactcattcttgccggggtcgacaacttgatcctgtgcgggaatgccggt
atcaatttttacacgctcggagcggaggtctgggcgcactatcgcaccgtgatccttgac
cacaatcatccagcctcggtgttgaatcgaatacagctgtcgatgactgactcgaaggct
attctggtgtcccgaagtgatgacgacctgttactgaccgatggcaacactggcgcaacc
ttggtggtgcgcaaggcattcaatcagcggtcggataatccgttgatcgagctgccggat
gccacgaatctgctgcgtatcacttgcctggtcgataactttatcaagcgcagttattcc
tcgggcgcgctggtggacctcagtatcgcgttgcggtaa
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integrated database retrieval system
