Pseudomonas mucidolens: NCTC8068_00469
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Entry
NCTC8068_00469 CDS
T08935
Symbol
rfaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00540
Lipopolysaccharide biosynthesis
pmud01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC8068_00469 (rfaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pmud01005
]
NCTC8068_00469 (rfaF)
Enzymes [BR:
pmud01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
NCTC8068_00469 (rfaF)
Lipopolysaccharide biosynthesis proteins [BR:
pmud01005
]
Core region
NCTC8068_00469 (rfaF)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
SQH31546
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All DBs
Position
1:535787..536965
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AA seq
392 aa
AA seq
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MLAMQVLRSLCQTGVMLSRASPLPQKARSTVIIDAGRHEPPRIVCGNYMNILIVGPSWVG
DMVMAQTLFQCLKQRHPDCQIDVLAPEWSRPILERMPEVRQALSFPLGHGALELATRRRI
GKSLGGQYDQAILLPNSMKSALVPFFAGIPKRTGWRGEFRYGLLNDVRKLDKARYPLMIE
RFMALAYAPGAELPATYPRPSLQIDPVCRDAALAKFGLSLDRPVLALCPGAEFGESKRWP
SEHYAKVAEMKIREGWQVWLFGSKNDHSVGEDIRQRLIPGLREEAVNLSGDTSLAEAIDL
MSCADSVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTPPLADKVEVVRLGLECSPCFDRT
CRFGHYNCLRQLLPQSVADALQRLQGSVVEVH
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgcgatgcaggtgctgcggtctctctgccagaccggggtgatgctgtcgcgagca
agcccgctcccacaaaaagcccgatccacagtaattatcgatgcggggaggcatgagcct
ccccgcatcgtttgtggaaactacatgaatattctgatcgttgggcccagttgggtcggt
gacatggtgatggcgcagacactgtttcagtgtctgaaacaacgtcatcccgactgccag
atcgacgtgctcgcccccgagtggagccgtccgatcctggagcgcatgcctgaagtgcgt
caggccttgagctttccgctgggccatggcgccctggaactggcgacccgtcgacgcatc
ggcaaatccctgggcggccagtacgatcaagcgatcctgctgcccaactcgatgaaatcg
gcgttggtgccgtttttcgccggcatccccaagcgtaccggctggcgcggcgagtttcgt
tatggcctgctcaacgatgtgcgcaagctcgacaaggctcgttacccgctgatgatcgag
cgcttcatggccctggcctacgcgccgggcgccgaattgcctgcgacgtacccgcgcccc
agcctgcaaattgatccggtttgccgcgacgcagccttggccaagttcggcctgagcctc
gatcggccggtgctggcgctgtgtccgggggccgagtttggtgagtccaagcgctggccg
tcggagcattacgcgaaagtcgccgagatgaaaatccgcgagggctggcaggtctggttg
ttcggttcgaaaaacgatcattcggtgggagaagatatccgccagcgcctgatccccggt
ttgcgcgaagaggccgtcaacctcagcggcgatacgtcgctggccgaggccatcgacctg
atgtcctgcgcggattcggtggtgtccaacgattccggcctgatgcacgtggcggccgcg
ctgaaccgtccgctggtggcggtctatggctccacgtctcccggtttcacgccgccgttg
gccgacaaggtcgaagtggtacgcctgggcctggaatgcagtccgtgctttgaccgcacc
tgccgctttggccactacaactgcctgcgtcagttgctgccacagtctgtggctgatgcc
ttgcagcggttgcaaggctccgtggtcgaggttcactga
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