Pseudomonas mucidolens: NCTC8068_00540
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Entry
NCTC8068_00540 CDS
T08935
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC8068_00540 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmud03032
]
NCTC8068_00540 (dnaB)
Enzymes [BR:
pmud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCTC8068_00540 (dnaB)
DNA replication proteins [BR:
pmud03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC8068_00540 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
AAA_22
KTI12
divDNAB
nSTAND3
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
SQH31614
LinkDB
All DBs
Position
1:612900..614297
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AA seq
465 aa
AA seq
DB search
MNDISAPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRL
IFRAIAKLADQNSPIDVVTLAEQLDKEGQTSQVGGLGYLGELAKNTPSVANIKAYAQIVR
ERATLRQLIGISTEIADSAFNPEGRTAAEILDEAERQIFQIAEARPKTGGPVSVNDLLTK
AIDRIDTLFNTDNAITGISTGYTDLDEKTSGLQPSDLIIVAGRPSMGKTTFAMNLVENAV
LRSDKAVLVYSLEMPGESLIMRMLSSLGRIDQTKVRAGRLEDDDWPRLTSAVNLLNDRKL
FIDDTAGISPSEMRARTRRLVREHGDIALIMIDYLQLMQIPGSSGDNRTNEISEISRSLK
ALAKEFNCPVVALSQLNRSLEQRPNKRPVNSDLRESGAIEQDADVIMFVYRDEVYHPETE
HKGIAEIIIGKQRNGPIGFVRLAFIGKYTRFENLAPGSYNFDDDE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatctccgctcctgagcaatacgatctgcaaaccgctgccctgaaggtgccg
ccgcattccatcgaggccgaacaggccgtgctcggtggcttgatgctggacaacaacgcc
tgggaacgcgtgctcgatcaagtctcggacggcgacttctatcggcatgaccaccgtctg
atcttccgcgccattgccaagttggccgaccagaactcaccgatcgacgtggtgaccctg
gccgagcaattggacaaggaaggccagacctcccaggtcggtggcctcggttaccttggc
gaactggcgaaaaacacgccgtccgtcgccaacatcaaggcctatgcgcagatcgttcgt
gagcgggcgaccctgcgccagttgatcggcatcagcaccgaaatcgccgacagcgccttc
aaccccgaaggccgtaccgctgccgagattctcgacgaagctgagcgccagatcttccag
atcgccgaagcccgcccaaaaaccggcggtccggtgagcgtcaacgacctgctgaccaaa
gccatcgaccgtatcgataccttgttcaatacggacaacgccatcaccggtatttccacc
ggctacaccgacctcgacgagaagaccagcggcctgcagccgtccgacctgatcatcgtg
gccggccgtccgtccatgggtaagaccaccttcgcgatgaacctggtggaaaacgccgta
ttgcgcagtgacaaggcggtgttggtgtactcgctggagatgccaggtgaatcgctgatc
atgcgtatgctgtcgtctctggggcgtatcgaccagaccaaggtgcgtgccggccgcctc
gaagacgacgactggccgcgcctgacgtcggcggtcaacctgctcaacgaccgcaagctg
ttcatcgatgacaccgccggtatcagcccgtcggagatgcgtgcgcgcacccggcgcctg
gtgcgtgagcacggtgacattgcgctgatcatgatcgactacctgcaactgatgcagatc
cccggttccagcggcgacaaccggaccaacgaaatttccgagatatcccggtcgctgaaa
gccctggccaaggaattcaactgcccggtggtggcgctgtcccagctcaaccgttccctg
gaacaacgtcccaacaagcgcccggtgaactccgacttgcgtgaatccggggcgatcgag
caggatgctgacgtgatcatgttcgtctaccgtgacgaggtgtatcacccggagaccgag
cacaagggcattgccgaaatcatcatcggcaagcagcggaacgggccgatcggctttgtg
cgcctggcgttcattggcaagtacacgcgttttgaaaacctcgcgccgggcagctataac
ttcgacgacgacgagtaa
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