Pseudomonas mucidolens: NCTC8068_00633
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Entry
NCTC8068_00633 CDS
T08935
Symbol
pbpD
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00550
Peptidoglycan biosynthesis
pmud01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NCTC8068_00633 (pbpD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pmud01003
]
NCTC8068_00633 (pbpD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
NCTC8068_00633 (pbpD)
Enzymes [BR:
pmud01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NCTC8068_00633 (pbpD)
Glycosyltransferases [BR:
pmud01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NCTC8068_00633 (pbpD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pmud01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NCTC8068_00633 (pbpD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
SQH31705
LinkDB
All DBs
Position
1:724172..726502
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AA seq
776 aa
AA seq
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MNLRLVARWTVGSLLLVMALLWLADRLWPLPLPKDDLARVVLAEDGTPLWRFADADGVWR
YPVQSREVSPYYLDALLTYEDRWFYQHPGVNPLSLMRATWQNLTDARVVSGGSTLSMQVA
RLLDPHSRTLHGKLRQLWRTAQLEWYLSKEQILNLYLNRAPFGGTLQGVAAASWAYLGKS
PQHLTRAEAALLAVLPQTPSRLRPDRHPRRAQEARDKVLRRLGEFQVWPQSAVDEALEES
LLLAPRQEPSLAPLLARRLNRPDSPPLIRTTIDASLQRRLEDLLMGWRARLPEHTSAAIL
VVEEQSMAVRAYLGSVDINDARRFGHVDMISALRSPGSTLKPFLYGMALDAGLIHSESLL
QDVPRRYGDYRPGNFSMGFTGAVPASTALSSSLNLPAVQLLEAYGPKRFAGEMRVGGMPL
ALPPMAEPNLALILGGAGSRLEELVSGYSAFARDGKSATIRLQPQDLLRERPLLSPGSAW
IVRRILSGQARPDRDPRAELVQRPVLAWKTGTSYGFRDAWALGVGPRYLIGVWIGRPDGT
PVPGQFGLASAAPLMLQVHDVLTNRDSQRGITAPVKPVPTNVGVAAICWPLGQPMSRSDP
NCRRQRFAWTLDKTTPPTLQALDQPLSVGLMEKIWVNAKGLRVAANCPGAVSRDIALWPA
PLEPWLPRIERREARIPAPDSACPPPALAASSPLSIVGVREGDQLRLPASSSHALRLELS
ALGGSGRRWWFLNGAPLGDSANQDSINTSFEHLGRYQLSVLDEAGQTARVEFSVVD
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttgcgattagttgcacgctggaccgtgggtagcctgttattggtgatggcgctg
ctgtggctggctgatcgactctggccattacctctgcccaaggacgacctggcccgcgtg
gtgttggccgaggacggcacacccttgtggcgtttcgccgatgccgacggggtgtggcgt
tatccggtgcaaagccgcgaggtctcaccgtattacctcgatgccttgctgacttatgaa
gaccgctggttctaccagcatcccggcgtcaatccgttgtccctgatgcgcgccacctgg
cagaacctgacagacgcccgggtggtttccggtggcagcaccttgtcgatgcaagtggca
cgtttgctcgatccccattcgcgcaccctccatggcaagttgcgacaactgtggcgcacg
gcgcagttggagtggtacctgtccaaagagcaaatcctcaacctgtacctgaatcgagca
cccttcggcggtacattgcagggggtggcggcggccagttgggcgtatctgggcaaatcg
ccgcaacacctgacccgggccgaggccgccttgctcgccgtgttgccccagaccccgagt
cgcttgcgcccggatcgtcatccgcggcgagcccaggaggcgcgagacaaagtactgcgg
cggctgggcgaatttcaggtgtggccgcagtccgccgtcgatgaagcgcttgaagaatcg
ctgttgctggcgccacgccaggaacccagtcttgcgccattgctggcccgtcgtctgaac
cgtcccgacagcccgccactgattcgcaccaccattgatgccagcctgcaacgccgcctg
gaagacttgctgatgggctggcgtgcgcgcctgccggaacacacctcggcggccattctt
gtggtggaagagcaaagcatggcggtgcgcgcctacctcgggtcggtggacatcaacgac
gcccgacgctttggtcatgtcgacatgatcagcgccctgcgttcgccggggtcgacgttg
aagccctttctgtatggcatggcgctggacgccgggctgattcactccgaatcgctgttg
caggacgtcccccggcgatacggcgattatcggccgggcaacttttccatgggctttacc
ggtgcggtgccggccagcactgcgttgtccagctcattgaaccttccggccgtgcagttg
ctggaagcctacgggccgaaacgctttgccggcgaaatgcgcgtcggcggcatgccgctg
gcgctaccgccgatggctgagccgaaccttgcgctgattctcgggggcgccggtagccgg
ctggaggagttggtcagtggctacagcgcctttgcccgggatggcaagagcgccacgatc
cgtttgcaaccgcaggatttgctcagagagcggccgctgttgtcgccgggttctgcctgg
attgtgcgacgcatcctcagcggccaggcgcggccggatcgcgatccgcgggccgagctg
gtacagcggccggtgctggcttggaagacgggcaccagttacggctttcgtgatgcctgg
gcgctgggtgtcgggccgcgttatctgatcggcgtgtggatcggccggcccgacggcacc
ccggtgccgggccagttcggcctggcgtcggcggcgccgttgatgttgcaggtgcatgat
gtgctgaccaatcgcgacagccagcgcggtatcacggcaccggtcaaaccggtgccgacg
aatgtcggggtggccgcgatttgttggccgttgggccagccgatgagccgcagtgatccg
aattgccgccgccagcgttttgcctggacgctggacaagaccacgccgccgaccttgcag
gcgctggaccaaccgttgagtgtcggcctgatggaaaaaatctgggtcaatgccaagggc
ttgcgggttgccgccaactgcccgggtgcggtgtcccgtgacattgcgctgtggccggcg
ccgctggagccttggttgcccaggatcgaacggcgcgaggcgcggattcctgcgcccgat
tccgcttgcccgccaccggcgttggcggcgtcatcgccgctgtcgatcgtcggtgtgcgt
gagggtgatcaactgcggctgcctgcgtcgagctcgcacgcattgcgtcttgaactgtcg
gccctgggcggcagcgggcggcgctggtggttcctcaatggtgctccgttgggcgacagc
gctaatcaggacagtatcaacaccagtttcgagcacttggggcgctatcaactgagtgtg
ctggatgaggcggggcagacggccagggttgagttcagcgtggtggactga
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