Pseudomonas mucidolens: NCTC8068_00679
Help
Entry
NCTC8068_00679 CDS
T08935
Symbol
apxIB_2
Name
(GenBank) ABC transporter-like protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC8068_00679 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmud02000
]
NCTC8068_00679 (apxIB_2)
02044 Secretion system [BR:
pmud02044
]
NCTC8068_00679 (apxIB_2)
Transporters [BR:
pmud02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCTC8068_00679 (apxIB_2)
Secretion system [BR:
pmud02044
]
Type I secretion system
Adhesin protein transporter
NCTC8068_00679 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_18
AAA_29
AAA_23
AAA_15
RsgA_GTPase
MMR_HSR1
Peptidase_C39
AAA_30
NACHT
AAA_27
Motif
Other DBs
NCBI-ProteinID:
SQH31746
LinkDB
All DBs
Position
1:781097..783280
Genome browser
AA seq
727 aa
AA seq
DB search
MNDAVMLEGDMSPVEPAFNPTPGFDYEVWLEAVLAVARHYRLECSAQSVRLAAQWTEGAS
VEDVVRQMARQAGLNCAIADFSPSTLMQRQLPVILQFADGQVGVLETLGDGEHVGIAYSG
DGGLQSSLSQQELLDSARNTVILRPMSAVRDNRVDDYIQPYAKDWFKDIVLRDMRPYGYV
MLASLVTSVLGLAGVLFSMQVYDRVIPAESMPTLYVLFGGVMLALVFDFIMRITRVRITD
MLGKRADIRVSDLVFGHAIRLRNSARPKSTGAFISQLKELEQLRELITSSTATALADLPF
FLLFLVIYWLIAGPLVAVPLVAVLFLVVPGLLSQKKLARLASQSMRESSLRSAMLVETIQ
GLDDIKALQAEQRFQHQWNHYNATCGDASLRLRMLTNKLLAWTNNVQGSVFAVVVVFGAP
MVMASDMTTGSLVAASILASRMMAPMSQITQVLTRWQQAKVALKSLNGLMELPVDHAEGS
KRVHLPVVRGHYVLNQAAFKYSDDAPIPALLVANLQIQPGERIAILGRNGAGKSTLLQAL
SGMLDLKGGSVSLDGVALGHIDPADVRRDVGLMTQNSRLFHGTLRDNLIMGAPHASDQEI
LHALALTGAADFIGKFPDGMDHMILEGGLGLSGGQRQSLLLSRLIIRQPHIVLLDEPTAS
LDEATERQLIQNLDKWAAHRTLIIATHRMSVLSLVNRIIVVDNGQVIVDDSKENAIARLS
KPKGKNQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgccgtgatgcttgagggtgacatgagcccggtggagccggcgttcaacccg
acgcccgggtttgattacgaagtgtggctggaggcggtgttggccgtggcccggcattat
cgtctggaatgctcggcgcaaagtgtccggcttgccgcacagtggaccgaaggcgcctcg
gtggaagacgtggtgcggcagatggcccgccaggccggattgaattgcgcgatcgccgac
ttcagtccctcgacgttgatgcagcgacaattgccagtgattctgcaattcgcggacggc
caggttggcgtcctggaaaccttgggggatggcgaacacgtcggcattgcctacagcggc
gatggggggctgcaaagcagcctcagccagcaggagttgctcgattcagcacgcaatacg
gtgattctgcggcccatgagtgcggtgcgcgacaaccgggtggatgactacatccagccg
tatgcgaaggattggttcaaagacatcgtgctgcgagacatgcggccttacggctacgtc
atgctggcatcgctggtgaccagcgtgctcgggctggcgggggtgttgttttccatgcag
gtgtatgaccgggtcatcccggccgagtcgatgccgactttatacgtgctgtttggcggc
gtcatgctggcgctggtgtttgacttcatcatgcgcattacccgagtccggatcaccgat
atgctcggcaaacgagcggacattcgcgtgtctgacctggtattcggacatgccattcgc
ctgcgcaacagtgcccgtcccaagtccaccggggcgttcatttcccagctcaaggaactg
gagcagttgcgtgaattgattacctcaagcaccgcgacggccctggcggacctgccgttt
ttcctgctgtttctggtgatctattggctgatcgccggtccgctcgtcgctgtgcccttg
gtggcggtgctgttcctggtggtgccgggtctgttatcgcagaaaaaactggcgcggctc
gccagccagtcgatgcgagaaagctcgttgcgtagcgccatgttggtggaaaccatccag
gggctggatgatatcaaggcactgcaagccgagcagcgcttccagcaccagtggaaccac
tacaacgccacatgtggggatgccagcttgcgactgcgtatgctgaccaacaagttgctg
gcctggaccaacaacgtgcagggttcggtgtttgcggtcgtggtggtgttcggcgcaccc
atggttatggccagcgatatgaccaccggtagcctggtggccgcctcgatccttgcgtcg
agaatgatggcgccgatgtcgcagatcactcaagtattgacccgttggcaacaggccaaa
gtggcattgaaaagcctgaacgggctaatggagctgccggtggaccacgctgaaggcagc
aagcgcgtgcacttgccggtggtgcgtggccattacgtcctcaaccaggcggcatttaaa
tatagcgacgatgcgccgatcccggccttgctggtggcgaatctgcagatccaaccaggc
gagcgtattgccattcttggtcgtaatggcgcgggcaagtcgaccttgctgcaagcactg
tccggcatgctcgacctgaagggcggcagcgtcagcctggatggggttgccctgggccat
atcgatcccgcggacgtgcgccgggatgtcgggctgatgacgcaaaactcacgtttgttt
cacggcaccctgcgcgacaacctgatcatgggcgcgcctcatgcgagcgaccaggagatt
ctccacgctctggcgttgactggcgcggcagactttattggcaaattccccgatggcatg
gaccacatgattctggaaggcggcctcggcttgtcaggcgggcagcgccagtcattgttg
ttgtcgcgcttgatcattcgccagccgcatatcgtcctgctggatgagcctacggcgtcc
ctggatgaagcgaccgaacgccagttgatccagaacctggacaaatgggcagctcaccgt
acgttgatcatcgcgacccatcgcatgagcgtattgagtctggtgaatcgaatcatcgtc
gtcgacaacggccaggtcatcgttgatgacagcaaggaaaatgcgatcgcccggctttcc
aagccgaaggggaagaatcagtga
DBGET
integrated database retrieval system
