KEGG   Pseudomonas mucidolens: NCTC8068_00717
Entry
NCTC8068_00717    CDS       T08935                                 
Symbol
dapF_1
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pmud  Pseudomonas mucidolens
Pathway
pmud00300  Lysine biosynthesis
pmud00470  D-Amino acid metabolism
pmud01100  Metabolic pathways
pmud01110  Biosynthesis of secondary metabolites
pmud01120  Microbial metabolism in diverse environments
pmud01230  Biosynthesis of amino acids
Module
pmud_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmud00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NCTC8068_00717 (dapF_1)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NCTC8068_00717 (dapF_1)
Enzymes [BR:pmud01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     NCTC8068_00717 (dapF_1)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: SQH31784
LinkDB
Position
1:complement(822557..823360)
AA seq 267 aa
MSLSFHKMHANGDDFVIVDLRNSSNPITNVLARRMGDRNLGIGFNQLAVMLKCDDAAAQV
LFWNADGSPLEVCGSATRGVAARLMGESNKASVVLRTERGLHTCERTATGAITVSMGEPH
CGWSDIPLARDLDTTVLPLEGMPAACSMGNPHCTYFVDDLAALDIASIGPGIETHALFPL
KTNVHFVQIINRRQIRLRIWERGGGIPQGSGSCACGAVVNGIRRGLLDECVEVACDGGNV
TVQWTGAGQVLLTGPVEATFSGTFTHS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtcactgagttttcataagatgcatgccaatggcgacgacttcgtcatcgtcgacctg
cgaaattcatcgaatcccattaccaacgtcctggcccggcgcatgggtgaccggaatctg
ggtatcggcttcaatcaactggcggtaatgctcaagtgtgatgacgcagcggctcaggtg
ctgttctggaatgccgatggctcgccgctggaggtatgtggcagcgccacgcgaggtgtc
gcggccaggctgatgggcgagtcaaacaaagcctcggtggtgttgcggaccgagcgtggc
ctgcacacctgcgaacgcactgcaaccggcgcgattaccgtcagcatgggcgaaccgcac
tgcggatggtcggatattcccctggcccgggacttggatacgacggttttgccgttggag
ggcatgcctgccgcgtgcagtatgggaaacccgcactgcacctattttgtcgatgatctg
gcggccctggacatcgcgagcattgggccggggatcgaaacccacgcgttgtttcctctc
aagacgaatgtgcatttcgtccagatcatcaaccgcaggcagattcggttacgtatatgg
gaacgtggcggcggcataccgcaaggctcaggttcctgtgcctgtggtgccgtggttaac
ggcatccgtcgaggcctgttggatgagtgcgtcgaggtcgcgtgcgatggcggaaacgtc
acggtccagtggaccggcgccggccaggtgttactcaccggcccggttgaagctacgttc
tcgggaacgttcacccacagctga

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