Pseudomonas mucidolens: NCTC8068_00717
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Entry
NCTC8068_00717 CDS
T08935
Symbol
dapF_1
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud00300
Lysine biosynthesis
pmud00470
D-Amino acid metabolism
pmud01100
Metabolic pathways
pmud01110
Biosynthesis of secondary metabolites
pmud01120
Microbial metabolism in diverse environments
pmud01230
Biosynthesis of amino acids
Module
pmud_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC8068_00717 (dapF_1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC8068_00717 (dapF_1)
Enzymes [BR:
pmud01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC8068_00717 (dapF_1)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
SQH31784
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All DBs
Position
1:complement(822557..823360)
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AA seq
267 aa
AA seq
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MSLSFHKMHANGDDFVIVDLRNSSNPITNVLARRMGDRNLGIGFNQLAVMLKCDDAAAQV
LFWNADGSPLEVCGSATRGVAARLMGESNKASVVLRTERGLHTCERTATGAITVSMGEPH
CGWSDIPLARDLDTTVLPLEGMPAACSMGNPHCTYFVDDLAALDIASIGPGIETHALFPL
KTNVHFVQIINRRQIRLRIWERGGGIPQGSGSCACGAVVNGIRRGLLDECVEVACDGGNV
TVQWTGAGQVLLTGPVEATFSGTFTHS
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgagttttcataagatgcatgccaatggcgacgacttcgtcatcgtcgacctg
cgaaattcatcgaatcccattaccaacgtcctggcccggcgcatgggtgaccggaatctg
ggtatcggcttcaatcaactggcggtaatgctcaagtgtgatgacgcagcggctcaggtg
ctgttctggaatgccgatggctcgccgctggaggtatgtggcagcgccacgcgaggtgtc
gcggccaggctgatgggcgagtcaaacaaagcctcggtggtgttgcggaccgagcgtggc
ctgcacacctgcgaacgcactgcaaccggcgcgattaccgtcagcatgggcgaaccgcac
tgcggatggtcggatattcccctggcccgggacttggatacgacggttttgccgttggag
ggcatgcctgccgcgtgcagtatgggaaacccgcactgcacctattttgtcgatgatctg
gcggccctggacatcgcgagcattgggccggggatcgaaacccacgcgttgtttcctctc
aagacgaatgtgcatttcgtccagatcatcaaccgcaggcagattcggttacgtatatgg
gaacgtggcggcggcataccgcaaggctcaggttcctgtgcctgtggtgccgtggttaac
ggcatccgtcgaggcctgttggatgagtgcgtcgaggtcgcgtgcgatggcggaaacgtc
acggtccagtggaccggcgccggccaggtgttactcaccggcccggttgaagctacgttc
tcgggaacgttcacccacagctga
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