Pseudomonas mucidolens: NCTC8068_00787
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Entry
NCTC8068_00787 CDS
T08935
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pmud
Pseudomonas mucidolens
Pathway
pmud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC8068_00787 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmud03019
]
NCTC8068_00787 (pcnB)
Enzymes [BR:
pmud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NCTC8068_00787 (pcnB)
Messenger RNA biogenesis [BR:
pmud03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NCTC8068_00787 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
SQH31847
LinkDB
All DBs
Position
1:complement(904266..905672)
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AA seq
468 aa
AA seq
DB search
MLKKLFQSFRSPLRRTQHKRSTPEVLNSSQHSLQRAQFSRYAVNIVERLQNAGYQAYLVG
GCVRDMLLNITPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRAN
HPQNDEDEDSNQSSRNESGRILRDNVYGTLEDDAQRRDFTINALYYDPVSERILDYANGV
HDIRNNLMRLIGDPTQRYQEDPVRMLRAVRFAAKLNFGIEKHTAAPIRDLAPMLREIPSA
RLFEEVLKLFLSGYAADTFEMLVDLQLFDPLFPASAEALERNPTYTHTLISEALINTDLR
IKQNKPVTPAFLFAALLWPALPARVLRLQNRGMPPIPAMQEAAHELIAEQCHRIAIPKRF
TLPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRESAGEQTDGLGEWWTDYQD
ANDSERREMIRELSGKGDGSGDAPKKRRRSSGSKRKRSAADTPGAVGE
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagttgttccagtcattccgttcccccttgcgtcgtacgcaacacaaacgc
agcacgcctgaagtgctcaatagcagccagcattcgctgcaacgcgcccaattcagccgt
tatgcggtgaacatcgtcgaacgattgcagaacgctggctatcaggcctatctggtaggc
ggttgtgtgcgggacatgttgcttaacatcacgcccaaggatttcgacgtcgccaccagc
gccacgccagagcaagtgcgcgccgagtttcgcaacgcgcggatcattggccggcgcttt
aaactggtgcatatccactttggtcgcgagatcatcgaggtcgcaactttccgcgccaac
catccgcaaaacgatgaagatgaggacagtaaccagtcttcccgcaacgaaagcgggcga
attctgcgggacaacgtctacggcaccctggaagacgatgcgcaacgtcgtgacttcacc
atcaatgccctttattacgatccggtcagcgaacgcatcctcgattacgccaacggcgta
cacgacattcggaataacctcatgcgcctaatcggcgatccgacgcagcgctaccaggaa
gacccggtacggatgctgcgggccgtcagattcgccgccaaactgaacttcggtatcgag
aaacacaccgccgcgcctattcgtgacctggcgccgatgctgcgggaaatcccctcggcg
cgcctgttcgaagaagtgctcaagttgtttctttcgggctatgccgctgacaccttcgaa
atgctggtggacctgcaattgttcgacccattgttcccggccagcgccgaagccctggag
cgcaacccgacctacacccacacgctgatcagtgaggcgttgatcaacaccgacttgcgg
atcaaacagaacaaacctgtgaccccggcgtttctgtttgcggccttgctatggcccgcg
ctgccagcgcgagtcctgcgcttgcagaaccgtggcatgccgccaattcctgccatgcag
gaagccgctcacgaattgatcgccgaacagtgccaccgcatcgcaattcccaagcgtttc
accctgccgatccgcgaaatctgggacatgcaggaacgcctgccacggcgcagcggcaaa
cgcgccgacctgctgctggacaatccgcgcttccgtgccggctacgacttcctgctgctg
cgtgaaagcgccggcgagcagaccgacggcctcggcgaatggtggaccgattatcaggac
gccaacgacagcgagcgccgcgagatgattcgtgagctgagcggcaagggtgatggcagc
ggcgatgcaccgaaaaagcgtcgccgcagcagtggcagcaaacgcaagcgcagcgccgcc
gacaccccgggcgcagtaggcgagtaa
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