Pseudomonas mucidolens: NCTC8068_01122
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Entry
NCTC8068_01122 CDS
T08935
Symbol
xerD_1
Name
(GenBank) Site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pmud
Pseudomonas mucidolens
Brite
KEGG Orthology (KO) [BR:
pmud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmud03036
]
NCTC8068_01122 (xerD_1)
Chromosome and associated proteins [BR:
pmud03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
NCTC8068_01122 (xerD_1)
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
SQH32167
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All DBs
Position
1:1248910..1249806
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AA seq
298 aa
AA seq
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MPAIDHPLIDRFLDALWLEKGLSDNTRQSYRSDLALFNGWLQEKHLELINAGRELILDHL
AWRLEQNYKPRSTARFLSGVRGFYRYLLREKLIAVDPTLQVDMPQLGRPLPKSLSEADVE
ALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVWVERYMRDARGELLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQEMHARHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccattgatcacccactgatagaccgtttcctcgatgccctgtggctggagaaa
ggcttgtcggataacacccgccagtcgtatcgcagcgacctggccctgttcaacggttgg
cttcaggaaaagcatctggagctgatcaacgctgggcgtgaattgatccttgatcatttg
gcctggcgcctcgagcagaattataagccgcgttctacggcgcgttttctctcgggtgtg
cgtggtttttatcgctatttgctgagggaaaagttgatcgccgtcgatcccactttacaa
gtggatatgccgcaactgggcaggcccttgcctaagtccctgtcagaggccgacgtcgaa
gccctgttggccgcgcctgacctgagtgaagccatcggtcaacgcgaccgtgccatgctt
gaagtgctgtacgcctgtggactgcgggtgaccgaactgatcagcctgaccctggaacag
gtcaatctgcgccagggcgtgttacgggtcatgggcaagggcagcaaggagcggttggtg
ccgatgggcgaggaagccattgtctgggttgagcgttatatgcgcgatgcccgcggcgag
ttgctgggcgggcgcccgagcgatgtgctgtttcccagcctgcgtggcgagcagatgacc
cgccagaccttctggcaccgtatcaagcatcaggccaaggttgccgggatcggcaagtcg
ctgtctccgcacactttgcggcatgcgttcgccacgcacctgctcaatcacggcgcggat
ttgcgggtggtgcaaatgctgctgggtcacagtgatttgtccactacccagatctatacc
catgtggcgcgcgcgcgtttgcaagagatgcacgccaggcatcacccgaggggctga
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